Musi006146.1
Basic Information
- Insect
- Megalurothrips usitatus
- Gene Symbol
- -
- Assembly
- GCA_026979955.1
- Location
- CM049598.1:725104-779935[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.8e-12 9.2e-08 31.2 0.0 4 133 12 144 10 191 0.68 2 4 7.9e-05 0.93 8.0 0.0 344 374 209 241 198 256 0.72 3 4 7.7e-10 9.1e-06 24.6 14.6 397 513 305 445 279 446 0.64 4 4 0.23 2.7e+03 -3.4 3.2 109 118 623 632 560 668 0.44
Sequence Information
- Coding Sequence
- ATGACGCGGATGGTGGTGCTCAAGAAACGCGTGGAGCGGGACAGACTCCGCGAGCGAGACCGCCTGGCTCGCGCGCAGATGTCTTCCCAGGCCCAGGCGGACCGCGAGGCCGAGGCCACTGGGGCGCCGCTCTTCGGGGCGCCCGTCCGGGTGAACCCCTCGGCCACGGACCAGTCGTCGCAGAAGATCCACTCGACGTTCGGCGACTACAACGCGGTCAAGCACCTGCTGCAGGAGCCGCTGCGGCTGTTCGGCATCGACGGCAACGGGCCGCCGACGCCGGGCGGGCCGGCCTCGGGTCCCGCCGCGGCCGCCGCCGCAGCCGCCGCCGCCGCTGCGGCCGCGGCCGCCGCCTCCGCGCCGACGTCTGCCGCGCCCGAGTTCAAGCGGCCCGCCCCCGGCTCGCACCACCACGCGTCCAGCCGCCACCACCCGCCGCCCCAGCACCGGGGCGGCTTCCTCAAGCCCGCCGACGGCAAGCCGGCGTACGCGGGCCGGGGGCAGTACCCGGGACAGCCCGTCAAGCACGGCGGCGGCGGCGACCACCGCTCCAACGGCCTCGTGCAGAACAAGGGCCCGCCTCTGAGGCCGCCGCACCACCGGCCCTCCCTGCACATCGACAGCAATGCGGACAGCTGCGCCGACGTGGAGAACATCCTCAAGGAGATGAAGTCGGGGCTGGTGACGCCGCTGACTGCCATCGCCGCGACGCCCCGCAAGGAGTGCGTCGACCCCAAGTTCACCTTCGACGCCGCCCACGCCGTGGCCCCGCTGGCCGGGCCGCGCGCCAACCCCTACTCCACCGTGCCCCTGCAGGCGCCAAGGTTACCGCCGCCGCTGCTGCCGCCGCCGTCACAGCAACAGCCGCCGCCGCAGCAACAGCAGCAGCCCGAGGCGCCGACGCCGGCCGCGTCCGCGGCAACCACACAGCGCAGCTACGTGGCGCCGGCCCGAGTCGAGTCCAACCTGGAGAACGACTTGGACCTCTCCGAGGACAGCGACGATGACGGCAAGGACAGCGTGGCCGCAGGGCGGGCGCCGAGCCCCGTCGACCTCCCCGTCAACCTGGACATTCTGCCACCGATGAGCGTGGGCCCGCCGCCGCCCGTCCTGGACCCCATGTCGCCCTGCCCGCCCATGAGCCCCATCGCCAACGCCAGCTCGTCGTCCGGGTCGGGCTCCGGGTCCGACTCGGGTTCCGACAGCGACTCGTCGAGCGAGGAGTCGAACGAAGAGGCTGAGGCCCCCGCGGCGCCGCCCCCGCCGGCCGCCCTGTCGCCGCCCCGGGGGGCCTCCCCGGAGCCGGAGGAGCGCTGGAACCTGGAGTCGTTCCTGTCCCCCGGCAGGAGCGAGGCCGCCAACGACGGAGCCGTCAAGAAGGAGGGCTTGATGGCGGCTCCGGACGCGTCCGTGTCCGGCGCCAAGAAGTCGGTGAGCCCCAACCCGCTGCCGCTGCCGCTGCCCCACCGGTCGCTGCCGCGCCGGCCGCTCGCACCCCCATCCTCCCTGCCGTCCGGCGGTGCGGGCGCGGGGGTGGGAGCGGGATCGGGGGCGGGGCGGCGCGGGGGCGGCGTTGGCGGGCGCCGCGGGGGTAGCGGGGGCGTCGTGGAGTCAGACCACAGCGACCACGGCGGCCTGGAGGTGCACGACGTTCACGACGTGGTGCAAGAGGTGCTCGCCAACCCCCACCCCGCGCTCCTGTCCCGCTTCTCTGACTCTGACGACTGTGCCAAGAAGCAGTCTGCACCACCCCCCGCACCCGAGGCCCCGGCCCCCGTGACTGCCATGACCAAACCCAGGCAGCGCAGTAGACGCGTACAGACGCCCACGGTCCCCGCGGCTCAGGCATCTGGCGAGGGCACAGGCCAGGCCCAAGGGCAAGGCACTCCTTCCTCCCTCTCGCCCACCCCGTCGCCGTCCGGCTCCGTCGGCTCTGTGGGCTCCAGCTCCTCCCTGTCATCCGGGTACAGCAGCGGCAACGCCAACGCCAACGGCGCCGTCGGCGGCAGCGTCAGTGGGGGAGCGCTGCGCCCGTCCCGCCGCGACATAGGCCAGGACGGGGGTCTCGGCGGACTAGCGGAGGTGCTCCTGGTCCCGCGCATCCGGGGCGCCACCCTGCACGACGACACGACGGAGAACAACAAAGGGCTGGGGCTCCTGCTGCCGCAGCTGCCGCAGCTGCTGTCTCCCGACCCCGCCGAGCTCCTCGGCCACAAGGAGATGGTGCCGAGCCTGCGCCTGTCGGGCCGGACGATGGACGCCCTGCTGTGGCTCTTCGCCCTCGTCTGCTTAGGCCTGGGCCTCACGCACCCGGCGCAGGCCATCAACTGCTACACCTGTTCGAGCCACAACGGGTCCGACCCCAACTGCGAGGACCCGTTCCACCCGGCGCACGCCTCCTACCAGCAGAAGTGCATGGTGCCCAAGACCGGCCACATCGGCGTCTTCCCGGCCAACTTCTGCATCAAGCTGATCGGCACCAGCGTGGACACGGGGGAGCTGATGGTGATCCGGGCGTGCGTGCGCAAGACCATGGACTCGCAGTGCGGCTCGTTCCGCTACCAGGACCAGATGATGAAGGGCTGCATCCTGACGTGCGACTACGACGGCTGCAACGCGGCGCCGCCGTCCGCGCCGGCCGGCCGGCCGCTGGCGCTGGTGGGGGCGCTGGCGGCGCTGGCCGCGGCCCGGGCCCCGCTCCAGTAG
- Protein Sequence
- MTRMVVLKKRVERDRLRERDRLARAQMSSQAQADREAEATGAPLFGAPVRVNPSATDQSSQKIHSTFGDYNAVKHLLQEPLRLFGIDGNGPPTPGGPASGPAAAAAAAAAAAAAAAAASAPTSAAPEFKRPAPGSHHHASSRHHPPPQHRGGFLKPADGKPAYAGRGQYPGQPVKHGGGGDHRSNGLVQNKGPPLRPPHHRPSLHIDSNADSCADVENILKEMKSGLVTPLTAIAATPRKECVDPKFTFDAAHAVAPLAGPRANPYSTVPLQAPRLPPPLLPPPSQQQPPPQQQQQPEAPTPAASAATTQRSYVAPARVESNLENDLDLSEDSDDDGKDSVAAGRAPSPVDLPVNLDILPPMSVGPPPPVLDPMSPCPPMSPIANASSSSGSGSGSDSGSDSDSSSEESNEEAEAPAAPPPPAALSPPRGASPEPEERWNLESFLSPGRSEAANDGAVKKEGLMAAPDASVSGAKKSVSPNPLPLPLPHRSLPRRPLAPPSSLPSGGAGAGVGAGSGAGRRGGGVGGRRGGSGGVVESDHSDHGGLEVHDVHDVVQEVLANPHPALLSRFSDSDDCAKKQSAPPPAPEAPAPVTAMTKPRQRSRRVQTPTVPAAQASGEGTGQAQGQGTPSSLSPTPSPSGSVGSVGSSSSLSSGYSSGNANANGAVGGSVSGGALRPSRRDIGQDGGLGGLAEVLLVPRIRGATLHDDTTENNKGLGLLLPQLPQLLSPDPAELLGHKEMVPSLRLSGRTMDALLWLFALVCLGLGLTHPAQAINCYTCSSHNGSDPNCEDPFHPAHASYQQKCMVPKTGHIGVFPANFCIKLIGTSVDTGELMVIRACVRKTMDSQCGSFRYQDQMMKGCILTCDYDGCNAAPPSAPAGRPLALVGALAALAAARAPLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -