Basic Information

Insect: Megalopta genalis
Gene Symbol: su(Hw)
Assembly: GCA_011865705.1
Location: NW:3421339-3425262[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00016 0.0084 15.6 0.2 1 21 61 81 61 82 0.94

2 13 5.8e-06 0.00031 20.1 1.3 1 23 161 184 161 184 0.95

3 13 0.0002 0.01 15.3 5.6 2 23 191 213 190 213 0.95

4 13 0.0014 0.076 12.6 3.9 1 21 219 239 219 244 0.94

5 13 8.8e-08 4.7e-06 25.9 1.8 1 23 251 273 251 273 0.98

6 13 0.00045 0.024 14.2 1.8 2 23 283 304 282 304 0.97

7 13 0.0013 0.07 12.7 0.5 2 23 311 332 310 332 0.97

8 13 7.8e-06 0.00041 19.8 3.4 1 23 338 360 338 360 0.98

9 13 2e-05 0.0011 18.5 2.5 1 23 366 388 366 388 0.94

10 13 1.5e-05 0.00082 18.8 0.9 1 23 394 417 394 417 0.94

11 13 2.4e-05 0.0013 18.2 0.5 1 23 423 445 423 445 0.95

12 13 1.6e-07 8.3e-06 25.1 1.6 1 23 451 473 451 473 0.98

13 13 2.6e-05 0.0014 18.1 2.5 2 23 480 502 479 502 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00016	0.0084	15.6	0.2	1	21	61	81	61	82	0.94
2	13	5.8e-06	0.00031	20.1	1.3	1	23	161	184	161	184	0.95
3	13	0.0002	0.01	15.3	5.6	2	23	191	213	190	213	0.95
4	13	0.0014	0.076	12.6	3.9	1	21	219	239	219	244	0.94
5	13	8.8e-08	4.7e-06	25.9	1.8	1	23	251	273	251	273	0.98
6	13	0.00045	0.024	14.2	1.8	2	23	283	304	282	304	0.97
7	13	0.0013	0.07	12.7	0.5	2	23	311	332	310	332	0.97
8	13	7.8e-06	0.00041	19.8	3.4	1	23	338	360	338	360	0.98
9	13	2e-05	0.0011	18.5	2.5	1	23	366	388	366	388	0.94
10	13	1.5e-05	0.00082	18.8	0.9	1	23	394	417	394	417	0.94
11	13	2.4e-05	0.0013	18.2	0.5	1	23	423	445	423	445	0.95
12	13	1.6e-07	8.3e-06	25.1	1.6	1	23	451	473	451	473	0.98
13	13	2.6e-05	0.0014	18.1	2.5	2	23	480	502	479	502	0.96

Sequence Information

Coding Sequence: ATGGAAGAAGTAATGGaaatTGTGAAAGTCGAAGATATATTACCGATTAAAGATACATCTTCGATGGACAATTTGTTTGTTACAGATAATATAGGAGAGGGTATTGTAATATCAAGTGAAGCAGAACCCAATATGAAagTTATTACTGACGGTGatcaaattatacaaattataacgGATTATGAATGTGTAACATGCCGCAGAGTCTTTAGGTCTCAGGATATGTTGACAGAACATTTGGATACATGTAGAGAAGAAGATGATTCTATGACTCTTATAGAACTCAGGAATATAGATCAATATGATTCGGAAGACGATAAAGACGACGACAATTCAGAATATGTCGATGATATCAACAACGAagattcaaattctAACAgccaaaaaaataataaccacAGACCAGTAATTATGCCTGTACCTGAAACCCAATGCCATTGTTGTGCTGAAGACTTAAATACTGCTCATACTGGTGGTGAACATAAGTGTTCAGAATGTGATCTCTCGTTCAAAAAGAAATCGTCTCTGGACAGACACATTGTTGTTATTCACTGGCATTACGATAATTGCATTTGTAAAGAGTGTGGACATTCCTTCAATAGTAGGAAAGCCTTGAATAAACATCGTTACACTACTCATGGAGATCATAAAATTTTTAGATGCGAACCTTGTGATACTTATTTTTCACGAAGCTATCATTTAAATCGGCACTTAATGCAATCTGGTTGTCATGGTAACATTCTTAACACGTTTAATTGTCAAGTCTGCCAAAAAGGTTTTACACGTAAGGATAATTTACGCGAACATTTACGTACACACGCCGGAGAACTTCAGAGGCCGAAAAAGTCATGTAAATATTGTCCTAAGGAATTTCATACTACTCAACAATTAGTAATTCATGAACGTGTACACACAGGAGAACGACCAGTTCAATGCGACTTATGCCCAAAGACGTTTTTGTCAACACTTGCATTAAGAAAGCATAGACGTGTGCATACAGGAGAAAAACCATTCGAATGTCACTATtgCCAGAAGAAGTTCGCTGCTCGCGAGACCTTAAATCGACACGAGAGAACCCACACTGGCGAGAAACCACATGTTTGTCAGTATTGCAATAAATCATTCATTCAAGCTGCTCAGTTGAGGGCACACGTGTTTCACCATACTGGTGAAAATGGTTTTTATTGTGATGTATGTGGGAAAGCTTTCAATCGAAAGGCTCGTTTGAATGttcataaaaaatttgttcacgAAGGAGCAACACCATTCACGTGTGAAGTTTGTGAGAAAAGATTTATAAGGAGAGAAGATCTTGTTAAACACTCATTGCTTCATACTGGCATTAAACCATTCAAATGTGATAAATGCGAGAAAGCATTTTCCACCAAATCCTCCTTACAAGCTCACTCAAATACTCATAGAAGGGAACCACCTCAATCTTGTCTTGAATGCAATAGAGTGTTCATTCGGCAAGACTGTTTGATGAGGCACATAAAGTCTAAGCATCGTGAATTATTGGAGGACGTGATGAACGAAGTGGAAAAGAAACATTTACAAACacagttatataatattgctacaCTTGCTGCCGAAAAGACAAAAAATGGAGAATCTAGAGAACTTTCAACTGATGAACTATTAACAGCTATATCGGATTTGTTAAAGATACTAATTGATGATGAAACTCTACAGCTGTTTGGTTGGCCTGAAGCTCCTATTCAAGATATCCTAGAAGCCGTGATTAGAAGGTGTGGACATTCACCGGTAACATCggatactaatttttattttaccgagCGGTTGAGAGAAAATGTGAAACTTTTATTTAGTGTTGTTATAGAGGATGATCCAGTGAAATCCCTTTTAACAACGAAAACCGTAGATGATGTCATTTTACACGTTTTACAACTTTCAAAACAATACACATCAAgttcgtaa
Protein Sequence: MEEVMEIVKVEDILPIKDTSSMDNLFVTDNIGEGIVISSEAEPNMKVITDGDQIIQIITDYECVTCRRVFRSQDMLTEHLDTCREEDDSMTLIELRNIDQYDSEDDKDDDNSEYVDDINNEDSNSNSQKNNNHRPVIMPVPETQCHCCAEDLNTAHTGGEHKCSECDLSFKKKSSLDRHIVVIHWHYDNCICKECGHSFNSRKALNKHRYTTHGDHKIFRCEPCDTYFSRSYHLNRHLMQSGCHGNILNTFNCQVCQKGFTRKDNLREHLRTHAGELQRPKKSCKYCPKEFHTTQQLVIHERVHTGERPVQCDLCPKTFLSTLALRKHRRVHTGEKPFECHYCQKKFAARETLNRHERTHTGEKPHVCQYCNKSFIQAAQLRAHVFHHTGENGFYCDVCGKAFNRKARLNVHKKFVHEGATPFTCEVCEKRFIRREDLVKHSLLHTGIKPFKCDKCEKAFSTKSSLQAHSNTHRREPPQSCLECNRVFIRQDCLMRHIKSKHRELLEDVMNEVEKKHLQTQLYNIATLAAEKTKNGESRELSTDELLTAISDLLKILIDDETLQLFGWPEAPIQDILEAVIRRCGHSPVTSDTNFYFTERLRENVKLLFSVVIEDDPVKSLLTTKTVDDVILHVLQLSKQYTSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625643;
90% Identity: iTF_00864782;
80% Identity: -