Mgen005403.1
Basic Information
- Insect
- Megalopta genalis
- Gene Symbol
- bab2
- Assembly
- GCA_011865705.1
- Location
- NW:1508986-1518661[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-07 0.00027 19.7 0.1 1 39 289 327 289 341 0.92
Sequence Information
- Coding Sequence
- ATGGAGAGTGGAAGTATCTTGAATACCCCAGGTAATTACCCTGGTGGGGATCGTCAACAGTTTTGCGTTTCCTGGAATTCTCATCAGTCGAATATGCACAGTGCGTTTCCTAAATTGTTAAGTTCCGAGCAATTTGTCGATGTCACTTTGGCTTGCGACGGAGGTTCGATAAAGTGTCACAAAGTGGTATTGTCAGCCTGTAGCGATTATTTGGAACGTTTACTGCTAGAAATACCATGCACCCATCCTATTATCTTTTTGAGAGACATGAGAATGTGGGAACTTCAAGCTTTGGTGGAGTTCATGTATCGTGGAGAAGTGTACGTGGAGCAACAGCAGCTGGCAAAGTTAATGCAGGCTGCTGAAGTATTACAGATTCGTGGTCTATCGACCCAAGGAAACGATAACACTTTGAGCGAAACTATTCCTCAACAGTGCGATTCGAATACTCCGTCGGCTGCTCCATCTACTACCACGCAGCAGGATGGAATCAATTTTAAAACGGAGGAAACTCATTCGGACGACGGAACATCGAATGCTAATTTTCTGGAGGCTACGTCGATCGCCGCATCTAGTACAGCCAGTGCGCCATCGCACACTAGCACTCCGGTGTCGCAGAACCCAAATTCGTCGAATTTTATGAACATGGAGCACAGCGAAGCGCTCCAACATTTGGAAAAAGCGCTCAGCGCTTGCGAAGCGACTCTAACCGAGACCCAGGGAATGGTAAAGATGGAACCGGACGAGCAATTTACTCAGCAACAGGATGTAAAACCGTACTCGATCAGTATGGTACCGAGCAGTAATTGTAATCCTAGTAGCCCGTTTCCTGCAATCGAAGGTTACCAGAGACGACAAAGACGTTCGGAGGAAGAATTGAAACAAGCTTCGGACATGGTGGCACGTGGTATGACGTTTCAAGTTGCTtcggaaaaatataaaattccgaTAAGTACGATTCGATTCTACATGGTTCGAAAAGGTATATTGCAAAGGCGAAAACGCGGTCGTGGTTCAAGCAATCTTGGCATGAACAGTCAGCCAGGAAGCCCGGCAAGTCCGCCGTATCATATGATGAATTATCGTTTGCCAGAGAGCCTAAACTCCAGCCTACCGTAG
- Protein Sequence
- MESGSILNTPGNYPGGDRQQFCVSWNSHQSNMHSAFPKLLSSEQFVDVTLACDGGSIKCHKVVLSACSDYLERLLLEIPCTHPIIFLRDMRMWELQALVEFMYRGEVYVEQQQLAKLMQAAEVLQIRGLSTQGNDNTLSETIPQQCDSNTPSAAPSTTTQQDGINFKTEETHSDDGTSNANFLEATSIAASSTASAPSHTSTPVSQNPNSSNFMNMEHSEALQHLEKALSACEATLTETQGMVKMEPDEQFTQQQDVKPYSISMVPSSNCNPSSPFPAIEGYQRRQRRSEEELKQASDMVARGMTFQVASEKYKIPISTIRFYMVRKGILQRRKRGRGSSNLGMNSQPGSPASPPYHMMNYRLPESLNSSLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00393525;
- 90% Identity
- iTF_00966113;
- 80% Identity
- iTF_00966113;