Basic Information

Insect: Megalocaria dilatata
Gene Symbol: -
Assembly: GCA_034642435.1
Location: CM067862.1:14503473-14510535[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.9 3.3e+02 3.2 0.0 3 23 280 301 278 301 0.90

2 16 0.51 57 5.6 5.0 1 23 351 374 351 374 0.93

3 16 0.53 60 5.5 0.0 2 21 381 400 380 401 0.93

4 16 0.00075 0.084 14.5 4.6 1 23 499 522 499 522 0.96

5 16 0.018 2 10.2 1.2 2 23 529 551 528 551 0.92

6 16 0.00064 0.072 14.7 2.4 1 21 647 667 647 668 0.95

7 16 0.025 2.8 9.7 0.9 2 23 680 702 679 702 0.91

8 16 0.84 95 4.9 2.5 1 23 705 728 705 728 0.96

9 16 0.019 2.2 10.1 0.3 3 23 735 755 733 755 0.95

10 16 0.15 17 7.2 0.2 1 23 759 782 759 782 0.96

11 16 1 1.1e+02 4.7 0.5 2 23 789 811 788 811 0.93

12 16 0.15 17 7.2 0.9 2 23 820 842 819 842 0.94

13 16 0.21 23 6.8 0.2 2 21 848 867 847 870 0.88

14 16 7.6 8.5e+02 1.9 2.6 3 23 1004 1025 1003 1025 0.95

15 16 1.7 1.9e+02 4.0 0.4 2 23 1032 1054 1031 1054 0.93

16 16 0.3 33 6.3 0.9 1 23 1067 1089 1067 1089 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.9	3.3e+02	3.2	0.0	3	23	280	301	278	301	0.90
2	16	0.51	57	5.6	5.0	1	23	351	374	351	374	0.93
3	16	0.53	60	5.5	0.0	2	21	381	400	380	401	0.93
4	16	0.00075	0.084	14.5	4.6	1	23	499	522	499	522	0.96
5	16	0.018	2	10.2	1.2	2	23	529	551	528	551	0.92
6	16	0.00064	0.072	14.7	2.4	1	21	647	667	647	668	0.95
7	16	0.025	2.8	9.7	0.9	2	23	680	702	679	702	0.91
8	16	0.84	95	4.9	2.5	1	23	705	728	705	728	0.96
9	16	0.019	2.2	10.1	0.3	3	23	735	755	733	755	0.95
10	16	0.15	17	7.2	0.2	1	23	759	782	759	782	0.96
11	16	1	1.1e+02	4.7	0.5	2	23	789	811	788	811	0.93
12	16	0.15	17	7.2	0.9	2	23	820	842	819	842	0.94
13	16	0.21	23	6.8	0.2	2	21	848	867	847	870	0.88
14	16	7.6	8.5e+02	1.9	2.6	3	23	1004	1025	1003	1025	0.95
15	16	1.7	1.9e+02	4.0	0.4	2	23	1032	1054	1031	1054	0.93
16	16	0.3	33	6.3	0.9	1	23	1067	1089	1067	1089	0.96

Sequence Information

Coding Sequence: ATGGAGACGAAATTATGCAGAATATGTGGACGAGTAGGTGCAACCCATCAAAATATCTTCAAAACGGAAggtttgaaacacaaaatagaAACCTGCCTACCAATATTTGTCTCTCAGCATTGCTTGCTTCCAGACACTATATGCCCAGAATGCTTGGAAAATATCACAAAGTTCTACTATTTCATCAAAGATTGCCTCCAAAGTATAATTATACTGGAAACTCAGTACGACGTCACAGAATCTTGTTTAAAGTCAAAAAGAAAACACGACAAAAGTTGCCTGGTGGATTTTTCTAAACCCACAAAGGCTCAAGAAACTCAAACTGAAGATACATATGATATATTATTTACAAAGtactatgaaaaaaattcagataaaattACCAAGTTACCAGTTAAAGGTTGTGATATAAATTTAGTTGATTATGAGGTTGATTCAGAGATTTCGGAATCTGAAAACCAGTCACAAAATAAAGGAGTTGTTGTAAATAAGAGAACTCATAAAAAGGTTGATGATTTACTAAACAATCTGATGAGTAAGACTGCTTTCACTAAACTGTATTTCGATAACTTTGAGAATAGCCTGATAAGTGAGATAAGTCACAGAAAGGGAGTAAAGAGAAAATCAGACGTGATAGAAAGTGATCCCCCAAAAATCTACAGAATCGATCGTGAAAGTCGTCGGAAAAATAAGGAACCTAAACGAATTCAAAACGGCAGCAGTGACCTATTTAATGGAACGCAAGAACTTGAGAAAGAGGAAAAATGTGAGGAGAAGCATCTTGAAAATTCTGACGATCAGggtaaaaatattttggatatgaACATACACCAGAATTGTCTTTTATGTGATGAAAAGTTGAATGGCCCTGGTGCTTTGGCTGCACATATATTCGAAGTACATGATTTAGATTTGAATCAGTCGATGGAAAATTTGTCTGACAAAAAGAAGAAGATtcctaatttattgaaaatttcggacATCAAAAGGAACAGCAGTTCGGATGAAAATCAACACGATTCCAACTCCCCCGCCAACAACCAGTCCGATTTCTCGTGTCAGATCTGCACTTACTCGTCTTCCACAAACCACGACCTGTACCTACACTGTCGTTCCGAGCACCCCGTCGAAGTTCCCCTGATGTGCGGAATCTGTTTTCAGCCGATGACATCTCTGGTCAATCTCAGGAACCACCTGAGGATCTGCGCCATCGAGTATCCGGTCAAAACGAGGTACTTCTGCTCCGTGTGTAAGTACGGAGAGGACGGAATGAGGGAGATGGAGAATCATGTGTTGATACACGAGTTTTTATTGGACATCAGCAAGAAGGAGGTTAAGATGTTCGATCCGGCCGATTATGTTCAGCTTAATAATTCTTGCGAGCTTGGTCCAGTGTCTCCGTCGTCAAAGAACTTGAGCTGCAGCCTCTGTTTCCAGTCGAACTTCCAATCCTTCAAGGAGTTCAGCAACCACCGTCGCAAGCAACACAGCAAATTTCACTGCGACCTCTGCAACAAATTTTACGGGAGAAACTCCCATCTTTGGAAGCACGTTAATCGACTGCACAAGAACCACCCCAACATCACCTGTCAGATCTGTCAGAAAACTAGCGCCTCCAAGTATCACCTAGGGCAACATTTCGCCAAAATCCATTCGACCAAGCAGAAAAACGCGACAGATGGCGCTTCTAACGCGCAAGAAATCAACGTTGAATTGGAGAACGATAGGTTTGTGTTCAGGAAGTTTGACTTTTTGAAGCAGGAGAAGAAGAGTACTTCCTCGGAGTTCGACGAGATATCTAATAACGCTGCATCGGATCAGGAAATATCCGATGAGGTTTTCGCGACTAACGTTCCGGCCCCTAAAGAAGTCGATGCTTCCAGTCACCTCTACACGAATATTATAACAAACTATACTCCCCCACCAAACGAGGGGGATTTCAAATGTCCGAAATGCTCAAAGGGATTTTCCAAGAAACTGCTGCTGAAGAAACACAAGAAAAACTGCAGACCTAAGCTGCAAAAAGACCTTTTGACCCGTTGCAAATCCTGCGCAAGAATCTTCAAAGACAGACAAAGCCTTGCCAAACATTTGGTCAATTATCACTCTGAATACACTTGCGAAATCTGCTCGCAAAAAACACAGAGTAAATGCGAGATAGTGTCCCACATAAGATTCACGCACCCTCAATGCAAGCTCTTTTGCAAGATCTGCGGGAACATCTTACGTTCTCAACAAAATCTAGCGGATCACACGAAAGACCACTCGAATTCTTACATTTGTCAGTTTTGCGGCGACTCCTTACCTTCGAAAATCAAACTGAAGATGCACATCCTGAGCTTGCAcaggaaaattttgagtttaaGCTGCGGCATATGCTTAAAGTTGTTCGAGAACCAACACATCCTGAGGAACCACGTGCAGCTGGTGCACAAGAACGACCTAAGACCCTTGACTTCGTGCACGGTCTGCGGTAAAAATTACGGCTCGAAATGGAAGACCTACGACCATCTGAACAAGTCGCACGGGCGTATTTTCAAAGTTTGCAAGACGTGTTTGGAGATTTTCAACACGGAAGAAGAATTAAACTCACACAACGAAGAGATTCATTCGTCTAAAAGTCAAATTTCCTCGTCGGTCAAACATTACGTGAAGCAAGAGATCGAAGAATTGGACGAATCCGAAAGTTATAAAGACGAAATGGAAGATATCGAAGAAATGGATAATGGTACCGAAGAAATTTTTAGTAACTTTGCGCCGGAAATATCTGCGACGAAAATATCTTTACTCGAGAAAAGATTGTTAGGTAAAAAGGTACTTAAAGAAGAGACTAAcgtaaaaactgaagaaaacaagATAAATGAAGATAAAACGAAGATAAACGCAGCTAAAACAAAACTTGCACCTACGAAGAAAAGTGTGGATTCTCCGAGACACGAAGACGATTTGGCAGCTCAGCAAAACAGTTCCAAGAGAACGGTTTATTTTAACAGCGACGTACCGTCGCTTTGCGAGATTTGCTTCAAAACGTGGCCGGCAAAAAAGCATCTATGGCAACATTACATACGTTGCCACAAAAGTGTTGCAGCTACAGTTTGTGGCATTTGTTTGAAGACCAACATTGACTACCAAACTTTGCAGAAGCACCTCCAGCAAAACCACCCAACCTTGCTCCACGGTCAAGGTTTCGGCTCGAATTTTATATGCAGAATTTGCGGAAGGTACCACAACGCAAGTTCCAAGTTGAAACTGCACATGGCGATACACGAAAACTTCGACTGGTCCTTGTTGGAAAGCAAGGACGAAAAAACGATCTTGAACGGCGAGAAAATTTTACAGAGGAACGAAGACAACGAAACGTACTACGAGAGCTTGATAGAACAGGTGGAATGTTCGTCGAACGAAGACGAGGAATCCGAAGACGAACAGAAAGAAGAAAAGGAAGACAACGATAATTCAAGCAGTTCCGACGTGAACGAGGACGTAAGCGAGAGCGAGTCTGAAGACTCGAAGAGGGGTCGGAATGAAAACAAACAACCGTTCCAAAGCAATTCCTCCGAAAACTCCGAAGAATTAGGTAGGTTTAGAATTGACTCAGGGAATAACCAGGAAAACGGTGTAGAgggaaataaagaatattcgGAAGTTGCGACCGAATTCCAAAGTACAGAAAGCGAAGAATCGAGCTCGGAAAGCTGCAGCAGTGACGAAGAAGAAATGATCGAAGGAAATGAAGATAGGTCGAACACCGCATCGTCCGGCGAGGTATTGATAGTGAGTGGACTGACCAATTCGAGCAGTAACGCCCTTCTGGTCAACTCCATGGGGGATTCTCTGCCGTTTGCAGATAATAGGTTGTTTcgtttcaaaactgaagagctGGATTCTGCAGTCAAGAGTATCAGTTTGGAGTGCGAGGGGCAAGTGAAAGAAGACTTGGAAATTGAGTACTGCGAGCTGTCCATCGGTACCGCTTTAAATGACAGGGAGATTGAGTCTGCCGTGGGAAGTATACTgtaa
Protein Sequence: METKLCRICGRVGATHQNIFKTEGLKHKIETCLPIFVSQHCLLPDTICPECLENITKFYYFIKDCLQSIIILETQYDVTESCLKSKRKHDKSCLVDFSKPTKAQETQTEDTYDILFTKYYEKNSDKITKLPVKGCDINLVDYEVDSEISESENQSQNKGVVVNKRTHKKVDDLLNNLMSKTAFTKLYFDNFENSLISEISHRKGVKRKSDVIESDPPKIYRIDRESRRKNKEPKRIQNGSSDLFNGTQELEKEEKCEEKHLENSDDQGKNILDMNIHQNCLLCDEKLNGPGALAAHIFEVHDLDLNQSMENLSDKKKKIPNLLKISDIKRNSSSDENQHDSNSPANNQSDFSCQICTYSSSTNHDLYLHCRSEHPVEVPLMCGICFQPMTSLVNLRNHLRICAIEYPVKTRYFCSVCKYGEDGMREMENHVLIHEFLLDISKKEVKMFDPADYVQLNNSCELGPVSPSSKNLSCSLCFQSNFQSFKEFSNHRRKQHSKFHCDLCNKFYGRNSHLWKHVNRLHKNHPNITCQICQKTSASKYHLGQHFAKIHSTKQKNATDGASNAQEINVELENDRFVFRKFDFLKQEKKSTSSEFDEISNNAASDQEISDEVFATNVPAPKEVDASSHLYTNIITNYTPPPNEGDFKCPKCSKGFSKKLLLKKHKKNCRPKLQKDLLTRCKSCARIFKDRQSLAKHLVNYHSEYTCEICSQKTQSKCEIVSHIRFTHPQCKLFCKICGNILRSQQNLADHTKDHSNSYICQFCGDSLPSKIKLKMHILSLHRKILSLSCGICLKLFENQHILRNHVQLVHKNDLRPLTSCTVCGKNYGSKWKTYDHLNKSHGRIFKVCKTCLEIFNTEEELNSHNEEIHSSKSQISSSVKHYVKQEIEELDESESYKDEMEDIEEMDNGTEEIFSNFAPEISATKISLLEKRLLGKKVLKEETNVKTEENKINEDKTKINAAKTKLAPTKKSVDSPRHEDDLAAQQNSSKRTVYFNSDVPSLCEICFKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNIDYQTLQKHLQQNHPTLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWSLLESKDEKTILNGEKILQRNEDNETYYESLIEQVECSSNEDEESEDEQKEEKEDNDNSSSSDVNEDVSESESEDSKRGRNENKQPFQSNSSENSEELGRFRIDSGNNQENGVEGNKEYSEVATEFQSTESEESSSESCSSDEEEMIEGNEDRSNTASSGEVLIVSGLTNSSSNALLVNSMGDSLPFADNRLFRFKTEELDSAVKSISLECEGQVKEDLEIEYCELSIGTALNDREIESAVGSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130931;
90% Identity: -
80% Identity: -