Basic Information

Insect: Aphidecta obliterata
Gene Symbol: -
Assembly: GCA_963966015.1
Location: OZ014434.1:5853639-5859572[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.3 2.4e+02 3.0 0.0 3 23 283 304 282 304 0.91

2 16 0.1 11 7.2 1.1 1 23 354 377 354 377 0.93

3 16 0.68 72 4.7 0.0 2 21 384 403 383 404 0.92

4 16 0.00049 0.052 14.5 4.6 1 23 502 525 502 525 0.96

5 16 0.014 1.5 10.0 1.8 2 23 532 554 531 554 0.93

6 16 0.00015 0.016 16.1 2.1 1 21 639 659 639 660 0.95

7 16 0.016 1.7 9.8 0.9 2 23 672 694 671 694 0.91

8 16 1.5 1.6e+02 3.5 1.7 1 23 697 720 697 720 0.94

9 16 0.012 1.2 10.2 0.2 3 23 727 747 725 747 0.95

10 16 0.062 6.6 7.9 0.2 1 23 751 774 751 774 0.97

11 16 1.2 1.3e+02 3.9 0.4 2 23 781 803 780 803 0.92

12 16 0.1 11 7.3 0.9 2 23 812 834 811 834 0.94

13 16 0.78 82 4.5 0.7 2 19 840 857 839 862 0.93

14 16 5 5.2e+02 1.9 2.6 3 23 994 1015 993 1015 0.95

15 16 0.88 93 4.3 0.3 2 23 1022 1044 1021 1044 0.94

16 16 0.19 20 6.4 0.9 1 23 1057 1079 1057 1079 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.3	2.4e+02	3.0	0.0	3	23	283	304	282	304	0.91
2	16	0.1	11	7.2	1.1	1	23	354	377	354	377	0.93
3	16	0.68	72	4.7	0.0	2	21	384	403	383	404	0.92
4	16	0.00049	0.052	14.5	4.6	1	23	502	525	502	525	0.96
5	16	0.014	1.5	10.0	1.8	2	23	532	554	531	554	0.93
6	16	0.00015	0.016	16.1	2.1	1	21	639	659	639	660	0.95
7	16	0.016	1.7	9.8	0.9	2	23	672	694	671	694	0.91
8	16	1.5	1.6e+02	3.5	1.7	1	23	697	720	697	720	0.94
9	16	0.012	1.2	10.2	0.2	3	23	727	747	725	747	0.95
10	16	0.062	6.6	7.9	0.2	1	23	751	774	751	774	0.97
11	16	1.2	1.3e+02	3.9	0.4	2	23	781	803	780	803	0.92
12	16	0.1	11	7.3	0.9	2	23	812	834	811	834	0.94
13	16	0.78	82	4.5	0.7	2	19	840	857	839	862	0.93
14	16	5	5.2e+02	1.9	2.6	3	23	994	1015	993	1015	0.95
15	16	0.88	93	4.3	0.3	2	23	1022	1044	1021	1044	0.94
16	16	0.19	20	6.4	0.9	1	23	1057	1079	1057	1079	0.96

Sequence Information

Coding Sequence: ATGGAGACGAAATTATGCAGAATATGTGGGCGACTTGGTACAACCCATCAGGATATCTTCAAAATAGACGGTTTGATACACAAAATAGAAACTTGCCTGCCAATATTTGTCACACAACATTGCCTACTACCGGACACAATATGCGAAGAATGCTTGGAAAACATCACAAAGTTCTATCGTTTCATCAAGAATTGCCTCCAAAGCATCATCATACTGGAATCTCAGTACGACGTTACAGAATCTTGTTTAAAGTCAAAAAGAAGACACGACAGAAGCTGCATGGTGAATTTTTCTGAACCTACGAAAGCTCAAGTAACCCAAACCGACGATACATATGATATATTATTTACTAAGTACTAtgaggaaaattcaaaaaaatttaagttaCCAATTAAAGGTTGTGATAAAAATTTAGTTGATTACGAGGTTGATTCTGAGAATTCAGAACCTGAGAATAAATCGCACAATAAAGGTGTTGTAGTTGTAAATAGGAGAACTCACTTAAAGGTTGATGATTTATTGAACAATCTCTTGGGTAAGACAGCTTTCACTAAAcaatattttgataattttgaaaatagtgTGATAAACGAATTAGTTCCCAGAAAGGGAGTCAAGAGAAAATCGGAAGTGATAGAGAATCGTCCAACAAAAATTTGTAGGATTGACAGTGGAAATCGCAGGAAGAACAAagtaccaaaaaaatttcaaaataacctcAGTTTCCAAATTAATGGTATTTCTGAGGCTGCACAACAATCGAATCCAGCAGAAAATGGGGAAAAGCATCTAGAAGTTGCCAGTGACCAGGGTATTATAACGTCAGATCCGGTCCTACCCCAAATATGCCTTTTGTGCGATGAAAAATTGAACGGGCCTGCTGCTCTGGCGgcacatatttttgaaatacacaGTCTGGATCTCAGTAAATCGATGGAAAATTTCTCCGATAAGAAGAAAAAGATTCCGAACCTATTGAAAATTTCGGACATCAAAAGAAGCAGCAGTTCCGACGAAAATCAGTACGATTCGAATTCGCCCCAAAATCATCAGGGGGAGTTCCCCTGTCAAATTTGCCCCTACTCGACTTCAGGCAAACAAGACTTGTACCTTCATTGTCGATCCGGACATCCCGTTGAAGTCCCGCTGATGTGCGGAATATGCTTCCAACCGATGACATCTCTGGTCAATCTGAGGAACCATCTGAAGATCTGCGCCATCGAGTATCCTGTTAAAACGAGGTATTTCTGCGGTGTATGTAAATACGGGGAGGACGGAATGAGGGAGATGGAGAATCATGTGTTGATACACGGATTTCTGATGGATACTTGCAGGAAGGAGGTTAGGATGTTCGATCCTGCCGATTATGTCGAGTTGAATTATTCTTGTGAATTTGGACCAGTCTCCCCCTCGTCGAAAAACCTGAGCTGCAGTCTCTGCTTCCAGTCGAACTTCCAATCGTTCAAAGACTTCAGCAACCACCGTCGGAAGCAGCACAGCaagtttcactgcgacctctgCAACAAGTTCTACGGTCGAAACTCCCACCTCTGGAAACACGTCAATAGACTGCACAAGAACCACCCGAGCATCACTTGCCAGATTTGCCAAAAGACCAGCGCTTCGAAGTATCATCTGGGGCAGCATTTCTCTAAAATTCATTCGGGGAAACAGAAAAGACGCACGGACATTGAACTGGGTAACGATCAGTCTGTGTTTGGAAAGTATAGTTTTTTGAAGCAAGAGAAGAATAGTACTTCTTCGGAGTTCGACGAGATCTCGAATAACGCAGCTTCGGATCAGGAGATATCAGATGAAGTTTTCATGGGTAACGTTCCTAAAGAAGTTGACGCTTCTAGTCATCTGTACACGAATATTATAACCAACTATACGCCTCCCCCGAACGGGGGAGACTTCAAGTGTCCGAAATGTTCAAAAGGGTTCTCCAAGAAGATACTGCTGAAGAAACACAAGAAAAATTGCAGGCCGAAACTGCAAAAAGACCTTTTGACCCGTTGCAAATCTTGCGCTAGGATCTTCAAAGATAGACAGAGTCTGGCGAAACATCTGGTCAATTACCATTCCGAATACACTTGTGAAATTTGCTCGCAAAAAGCTCAGAGTAAGTGCGAGATAGTGTCTCACATAAGATTTACTCATCCCAGATGCAAGCTCTTCTGTAAGGTCTGCGGGAACATTTTACGTTCCCAGCAAAATCTGGTGGATCACATAAACGACCACTCGAATTCCTACGTTTGTCAGTTTTGCGGTGACACTTTACCTTCCAAAATAAAACTAAAAATGCATATTTTAAGTTTGCATaggaaaattttgagtttgagCTGTGGTATCTGTCTCAAGTTGTTCGAAAACCAGCACATCCTGAAAGACCACGTGCAGTTGGTACACAAGAACGATCTCAGACCTTTGACCTCCTGCACAGTCTGCGGCAAGAACTACGGTTCAAAATGGAAGACCTACGACCATTTGAATAAGTCTCATGGTCGCATCTTCAAAGTTTGTAAGACCTGTTTGGAGATTTTCAATACCGAAGAAGAGTTGAACTTACATTGCGAAGAAATGCATTCTTCGAAGAATCAAAACACGCCAAGTATCAAACCCAGTTATTTAAAGCAAGATTTAGAAGAGATTGACGAATCAGAAAGTTGTAAAGAAGAAATGGAGGATATGGAAGAAATTGATAATACCAATGAAGAAGTGTTCAATACCTTCCCCCCAGAAATGTCTGCTGCAACAAAAATATCCTTACTAGAGAAAAGATTGTTAGGCAAAAAGATTGTAAGCGAAGAGACAAAACCGGAAGAAAACATCAACGAggataaaacaaaattgaacGTAGTTAAGACTAAACTTGTGTCTGCGAAGAAATTGGTAGATTCACCGAGGTACGAAGATGATATTGGCCAACAAAGTAGCTCAAAAAGAACGGTTTATGTCAACAGCGACGTACCATCACTTTGCGAGATTTGCTTCAAAACTTGGCCAGCGAAGAAGCATCTGTGGCAACATTACATTCGTTGCCACAAAAGTGTAGCGGCTACAGTTTGTGGCATCTGTTTGAAGACCAACGTCGATTACAGAACTCTACAAGAACATCTCAGACAGAACCACCCCACCCTGCTTCACGGACAAGGTTTCGGTTCGAATTTTATATGTAGGATATGTGGAAGGTACCACAACGCAAGCTCCAAGTTGAAATTACACATGGCCATACACGAAAATTTCGATTGGTCCATATTAGACACCAAAGATGAGAAGGAGAGCGTGAACGGCGAGAAAATGTTAGAGAGAAACGAAGACAACGAAACGTACTACGAGAGCTTGATAGAACAAGTGGAGTGTTCTTCGAATGAAGACGAAGATGAACACGAAGAAAAATGTGATAACGATAATTCGAGCAGCTCCGAGGTAAACGAAGATGAAAGTGAGCCCGAAACTATCTCTGACGACTCGAACAAGAATCGCAACGAAATCAAAAAACGGTTTCCAAGTAATTCCTCTGAGAACTCCGGAGAAGGAATGGAGTCCGGTTATTGCCAGACAGAACCAATAAATGGAAATAAGGAATTTCAAAGTACTGAGAGTGAAGATTCAAGTTCGGAAAGTTGCACAAGTGGGGACGAAGATATAGTTGAAGGGAACGGGGAGAGATCCAACACTGCTTCGTCTAATGAAGTCTTGTTAGTTAACGGACTTACAAATTCCAGTAGTAATGCAATTCTGGTGAGTTCCATGGGCGATTCTTTACAGTTTGCTGATGATGGTTTGTTCCGTTTCAAAACGGAAGAGTTGGATTCTGCGGTGAAAAGTATAAGTCTCGAATGCGAGACGCAGGTGAAGGAAGATTTGGAGATTGAGTACTGCGAGTTATCTATTGGTACCGCTTTGAACGACAGAGAAATTGAGTCTGCTGTAGGAAGCATATTGTAA
Protein Sequence: METKLCRICGRLGTTHQDIFKIDGLIHKIETCLPIFVTQHCLLPDTICEECLENITKFYRFIKNCLQSIIILESQYDVTESCLKSKRRHDRSCMVNFSEPTKAQVTQTDDTYDILFTKYYEENSKKFKLPIKGCDKNLVDYEVDSENSEPENKSHNKGVVVVNRRTHLKVDDLLNNLLGKTAFTKQYFDNFENSVINELVPRKGVKRKSEVIENRPTKICRIDSGNRRKNKVPKKFQNNLSFQINGISEAAQQSNPAENGEKHLEVASDQGIITSDPVLPQICLLCDEKLNGPAALAAHIFEIHSLDLSKSMENFSDKKKKIPNLLKISDIKRSSSSDENQYDSNSPQNHQGEFPCQICPYSTSGKQDLYLHCRSGHPVEVPLMCGICFQPMTSLVNLRNHLKICAIEYPVKTRYFCGVCKYGEDGMREMENHVLIHGFLMDTCRKEVRMFDPADYVELNYSCEFGPVSPSSKNLSCSLCFQSNFQSFKDFSNHRRKQHSKFHCDLCNKFYGRNSHLWKHVNRLHKNHPSITCQICQKTSASKYHLGQHFSKIHSGKQKRRTDIELGNDQSVFGKYSFLKQEKNSTSSEFDEISNNAASDQEISDEVFMGNVPKEVDASSHLYTNIITNYTPPPNGGDFKCPKCSKGFSKKILLKKHKKNCRPKLQKDLLTRCKSCARIFKDRQSLAKHLVNYHSEYTCEICSQKAQSKCEIVSHIRFTHPRCKLFCKVCGNILRSQQNLVDHINDHSNSYVCQFCGDTLPSKIKLKMHILSLHRKILSLSCGICLKLFENQHILKDHVQLVHKNDLRPLTSCTVCGKNYGSKWKTYDHLNKSHGRIFKVCKTCLEIFNTEEELNLHCEEMHSSKNQNTPSIKPSYLKQDLEEIDESESCKEEMEDMEEIDNTNEEVFNTFPPEMSAATKISLLEKRLLGKKIVSEETKPEENINEDKTKLNVVKTKLVSAKKLVDSPRYEDDIGQQSSSKRTVYVNSDVPSLCEICFKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNVDYRTLQEHLRQNHPTLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWSILDTKDEKESVNGEKMLERNEDNETYYESLIEQVECSSNEDEDEHEEKCDNDNSSSSEVNEDESEPETISDDSNKNRNEIKKRFPSNSSENSGEGMESGYCQTEPINGNKEFQSTESEDSSSESCTSGDEDIVEGNGERSNTASSNEVLLVNGLTNSSSNAILVSSMGDSLQFADDGLFRFKTEELDSAVKSISLECETQVKEDLEIEYCELSIGTALNDREIESAVGSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00965654;
90% Identity: -
80% Identity: -