Basic Information

Insect: Megalocaria dilatata
Gene Symbol: -
Assembly: GCA_034642435.1
Location: CM067855.1:54131539-54133179[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 8.6e-05 0.0097 17.5 1.5 2 23 180 202 179 202 0.95

2 10 0.049 5.5 8.8 0.9 1 23 208 230 208 230 0.96

3 10 2.5 2.8e+02 3.4 1.5 1 23 236 258 236 258 0.88

4 10 3.6e-05 0.004 18.7 0.4 1 23 264 286 264 286 0.98

5 10 6.1e-07 6.9e-05 24.2 0.3 1 23 295 317 295 317 0.99

6 10 8.9e-07 0.0001 23.7 0.8 1 23 323 345 323 345 0.99

7 10 5e-05 0.0057 18.2 1.9 1 23 351 373 351 373 0.97

8 10 3.2e-05 0.0036 18.8 3.7 1 23 379 401 379 401 0.98

9 10 6.4e-05 0.0072 17.9 2.7 1 23 407 429 407 429 0.98

10 10 0.00014 0.015 16.8 8.4 1 23 435 458 435 458 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	8.6e-05	0.0097	17.5	1.5	2	23	180	202	179	202	0.95
2	10	0.049	5.5	8.8	0.9	1	23	208	230	208	230	0.96
3	10	2.5	2.8e+02	3.4	1.5	1	23	236	258	236	258	0.88
4	10	3.6e-05	0.004	18.7	0.4	1	23	264	286	264	286	0.98
5	10	6.1e-07	6.9e-05	24.2	0.3	1	23	295	317	295	317	0.99
6	10	8.9e-07	0.0001	23.7	0.8	1	23	323	345	323	345	0.99
7	10	5e-05	0.0057	18.2	1.9	1	23	351	373	351	373	0.97
8	10	3.2e-05	0.0036	18.8	3.7	1	23	379	401	379	401	0.98
9	10	6.4e-05	0.0072	17.9	2.7	1	23	407	429	407	429	0.98
10	10	0.00014	0.015	16.8	8.4	1	23	435	458	435	458	0.98

Sequence Information

Coding Sequence: ATGGACTCTTATTGTAGATTATGTGGAGAATTGAATCTAGAACTGCTTCCAATTTTAGAGGATTTGGAACTTCCAAATAGAATATTCCAATTATATCATGTAGAAATCAATTTAGATGACCAGTTACCTACTTTAGCATGCCGAAACTGTTGGGATATGGTCCAAAGTGCATGGTTAAATTATTTGAGAGTGAGGAAAGCTCAAGAACATTTGAACGAACTATTGGAATCATTGGTCACAGTAGATCCTATTTGTAGAGATGATGACGATGACAATATTGATTTTTCTAATACAACATCTTCAAGAATCATTAACTGTGTGATAAACAATGATCCACTACCTTTAGTTAAAAATGAGGATCAAgctgaaattcaaaaaaatgttaaatcgCCTAAAAGCCGTaCAAGAAGATcatcacaaaagaaaaaagaTACAACTGAACCAGAAGAATTATCAGAGCTGAGTATTATAGAATTTAAAGATGATGGGAGCTGTGTTCCTAAAGAGGAGTTATTTGGATGGAGTTCCTATCCCTGGGTTTGTTGTGATTGTCAGCAAACTTTCAGATCTCCAGATGAGCTTAAGAATCATTTTTCAACAGATCATAATCAAGTGCCCAAGTACTCTTGTGTGGATTGTCAAAAAATTTACAGTAAATATAATGTATTTCTAAGTCATGTTAAACTTCATCAGGTAACTCTTAGATATTGCTGTGATGTATGCCATAAATGGTATCCTACAGTTAATGCAGTTGAAAAACATCGTGTTGAACATAAAGAAGAAACACAGTATGTTTGTTTGAGTTGTGGAAAAACATTCAGAATGCAGTCTGCATTAGTACTTCATTCTAGATCTCACCTTCCagctgaaataaaaaatagataccAGTGTGATGAATGTCCCAAACGTTTTGGAACAAAACCTAACTTAATGGCTCATAAAAGAATCCATTCTGGAGTTAAAGACTACACTTGTGATCAGTGTGGTAAAAGTTTTTTCCAAAAAGGGAATTTGGATAATCATGTATTAACACACACAGCAGCTAGACCCTTCTCTTGTAACACATGCAATAAGTCTTTTAAAACGTTAGTTAGACTCCGAAAACATGCCTCAGTTCATTCAGGATTGAAACCTCATAAATGTGATATATGTGGAAGACAGTTTAGAGAAAGAGGCACCTTAAAAGAACACCACAGAATTCATACAGGAGCTATGCCATTTACTTGTGAATTTTGCGGAAAAAATTTTAGGTTTAAAGGTGTTTTAACCACTCATAGAAGGCAACATACTGGTGAACGCCCTTATTCTTGCCATGAATGCCAGCACCATTTCACGAATTGGCCAAATTACAATAAACACATGAAAAGAAGGCATGGTATAAACACCAGCGTTACAGTAAGAAAACCACAGGCAATTCCACCTACTGGTATGCCTAGCAGAAACCCCCCAGGTACAGTTTTAGCACAACCTATCAGCGTCCCTGAGATCCAGGAAGAAAGTTATGTTGAGCAACATCAAACAACTTTTTTCCCAGTATTAGGATTATATAATATACCAGAAGATATATTGCAGCAACAAAGAGTTTAG
Protein Sequence: MDSYCRLCGELNLELLPILEDLELPNRIFQLYHVEINLDDQLPTLACRNCWDMVQSAWLNYLRVRKAQEHLNELLESLVTVDPICRDDDDDNIDFSNTTSSRIINCVINNDPLPLVKNEDQAEIQKNVKSPKSRTRRSSQKKKDTTEPEELSELSIIEFKDDGSCVPKEELFGWSSYPWVCCDCQQTFRSPDELKNHFSTDHNQVPKYSCVDCQKIYSKYNVFLSHVKLHQVTLRYCCDVCHKWYPTVNAVEKHRVEHKEETQYVCLSCGKTFRMQSALVLHSRSHLPAEIKNRYQCDECPKRFGTKPNLMAHKRIHSGVKDYTCDQCGKSFFQKGNLDNHVLTHTAARPFSCNTCNKSFKTLVRLRKHASVHSGLKPHKCDICGRQFRERGTLKEHHRIHTGAMPFTCEFCGKNFRFKGVLTTHRRQHTGERPYSCHECQHHFTNWPNYNKHMKRRHGINTSVTVRKPQAIPPTGMPSRNPPGTVLAQPISVPEIQEESYVEQHQTTFFPVLGLYNIPEDILQQQRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00764977;
90% Identity: iTF_01024316;
80% Identity: -