Mdil017651.1
Basic Information
- Insect
- Megalocaria dilatata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_034642435.1
- Location
- CM067857.1:62400729-62403659[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-20 2.9e-16 60.8 1.9 223 300 21 97 18 97 0.95 2 2 0.25 3.4e+03 -1.8 4.8 129 156 121 148 104 171 0.47
Sequence Information
- Coding Sequence
- ATGCAATCGATAACAAAACATAATGGAAACTTCAGTTGTTACTTAGCCTTTGATTACTATGTTAGACTTTCAAGATTTATAAAAGATAAACGCGATCTTGAAGATGAAATAAACCACTTAAAATTAGAattagaagaagaaaaaagtaGAAAACGGAAATCACATTCTATCAGTAGTACTAATGGTCCAGTATCCGATTATGATACAGATGGAGATATACAAAAAGATGGTAGTAGCTTGTTAGCGGATTATAAGTTCAGAGCCCAAAAGGCTGAACAGGATGTAGCAACCCTTCAGGCAACTGTTGCTAGATTGGAAAGTCAAGTTGTTCGGTATAAATCCGCATCTGAGGCTTCCGAAAAATTAGAAGAAACTCTCAAAGCTGAAAAACGGAAACTTCAAAGAGAAGCTCGAGATGCCATTAGCAGGGCAGAGGAATTAGAAACATCAAATCTGCATTTGCTCAAACGATTGGATAAACTGAAAAATGCAAAATCAACGCTCTTGAAAGAACTTTGA
- Protein Sequence
- MQSITKHNGNFSCYLAFDYYVRLSRFIKDKRDLEDEINHLKLELEEEKSRKRKSHSISSTNGPVSDYDTDGDIQKDGSSLLADYKFRAQKAEQDVATLQATVARLESQVVRYKSASEASEKLEETLKAEKRKLQREARDAISRAEELETSNLHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -