Mdil017440.1
Basic Information
- Insect
- Megalocaria dilatata
- Gene Symbol
- tfip11
- Assembly
- GCA_034642435.1
- Location
- CM067857.1:59118531-59138654[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-89 5.9e-85 286.4 12.7 12 275 6 267 4 267 0.98 2 2 0.07 9.7e+02 0.3 0.2 158 271 280 308 270 321 0.53
Sequence Information
- Coding Sequence
- atgatttttttatttcagaatgaatttttCGAAGAATATTGCAGATATGAATTAGCAGAGTTGGCTCCAGGGCTGGCTGGTCCTCTTTTAACTTCAGCTATGGCTAAGTGGTCACCACTGATTACCCCAAGAGAATTTCTTTACGTTTTTGAACAGTGGAAGGAGATTTTGGAGATGCACTTGCGTCATCGTGGGACATTTGAAGGTAATAAAATGGGAATACAGCCGTACGATAGTCTCATTTGGCATACTTGGATGCCTGTGATAAGAACTTGTGTTAGTACTTGGAATCCAAGGGATTGTGATACCTTAATCAATCTACTAGAGTTATGGATTCCGGTCCTTCCTCAATGGATAGTGGATAATATATATGATCAATTGCTATTACCAAGGTTGAAAGATGAGGTCAATTCTTGGGATCCTATGACAGATACTGTTCCCATTCATACATGGATTCATCCTTGGATTCCTTTAATTGACTCCAGATTACAAGACATTATATATCCAATTATTCAAGAGAAACTAGGAGCAGCTTTGACAAACTGGCATCCATCGGATCGTTCTGCCAAATTTATGTTACAGCCTTGGAAAAGAGCCCTTCCCGATGGTGCTTTTATAGCATTCCTGATAAAGCACATTGTACCTAAATTACAAGTGTGTATGCAGTCACTCGTTATCAGTCCTCTTGAGCAACATCTAGATAATTGGCACTGGGTTATGGATTGGAATGACATGATATCTGTTGGTAACATGACTCTCATTCTCGACAGGTATTTCTTTCCAAGGTGGCTGCAAACGCTTGCATTGTGGTTGAATCACGATCCTAATTACACTCAGGTTACAGAGTGGTATTCTGGATGGAAGAGGATGCTTTCGGAGGAACTTTTAGCCCAGCCAACAATTAAAGAAAACTTTCACAAAGCTCTAGAAATGATGAATAGAGCTGTCAATCTAGAGCAGCAACCAGGAGCCAGAGAATCTATTTCTTATTTAACAACAATAGAAACTAATGTACCTCCACCACCGCCTCCTCCAAAAGTTGAGagctTTGCAGAGGCTGTTAGGTTAACTTCACAGATTCCACAAGGTTTCAAGGATCTTGTAGCAAAAAGATGTGAAGAGAAAGGAATTCTGTTTGTACCTATAACAAATAAGTTCAGAGAATCCAAGCAAGTTTATAGGATTGGTACTAATGGAGTCCAATGCTACATAGATAGAAATGtagtattttattcaaataataatagtaCTTGGTTACCAGTCTCACTAAATAGATTGTTAGATATGGCATGA
- Protein Sequence
- MIFLFQNEFFEEYCRYELAELAPGLAGPLLTSAMAKWSPLITPREFLYVFEQWKEILEMHLRHRGTFEGNKMGIQPYDSLIWHTWMPVIRTCVSTWNPRDCDTLINLLELWIPVLPQWIVDNIYDQLLLPRLKDEVNSWDPMTDTVPIHTWIHPWIPLIDSRLQDIIYPIIQEKLGAALTNWHPSDRSAKFMLQPWKRALPDGAFIAFLIKHIVPKLQVCMQSLVISPLEQHLDNWHWVMDWNDMISVGNMTLILDRYFFPRWLQTLALWLNHDPNYTQVTEWYSGWKRMLSEELLAQPTIKENFHKALEMMNRAVNLEQQPGARESISYLTTIETNVPPPPPPPKVESFAEAVRLTSQIPQGFKDLVAKRCEEKGILFVPITNKFRESKQVYRIGTNGVQCYIDRNVVFYSNNNSTWLPVSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00998682;
- 90% Identity
- -
- 80% Identity
- -