Basic Information

Insect: Megalocaria dilatata
Gene Symbol: bab1
Assembly: GCA_034642435.1
Location: CM067854.1:36260146-36308391[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.5e-11 2.4e-08 34.7 0.0 1 39 370 409 370 413 0.90

2 4 6.6e-12 4.5e-09 37.0 0.0 1 39 424 462 424 465 0.95

3 4 1.6e-18 1.1e-15 58.2 0.0 1 45 479 524 479 524 0.98

4 4 4.5e-16 3e-13 50.4 0.0 1 39 531 570 531 574 0.94

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.5e-11	2.4e-08	34.7	1	39	370	409	370	413	0.90
2	4	6.6e-12	4.5e-09	37.0	1	39	424	462	424	465	0.95
3	4	1.6e-18	1.1e-15	58.2	1	45	479	524	479	524	0.98
4	4	4.5e-16	3e-13	50.4	1	39	531	570	531	574	0.94

Sequence Information

Coding Sequence: ATGACGAGCCAGCATTATTGTCTGAGATGGAACAATTATCAGAGTAATATGACTTCCGTCTTCCACCAGCTTCTAAGAAACGAAGACTTCGTCGATGTCACTTTGGCCTGTGACGACCTTTCACTTAAGGCACACAAAGTGGTTTTATCGGCTTGTTCATCTTACTTCCAGAAACTGTTATTAAATAATCCATGCAAACATCCTACCATCATTATGCCACAGGACATAAGCTTTTCCGACTTGAAATTTATCATTGACTTTGTATATAAGGGAGAGATCGACGTTTCACAGACTGAATTACAGTCCCTCCTAAAAACCGCCGATCAACTGCGTATCAAAGGTCTGTGCGAATCCCACAATAAGGAGAACAATCCCGAATTCCTGCATAATCAGTCGTCCAACGTAACTAGAATAAGAAAATCGTCCCATCTGAGGGACGAAGAACCACTGGATGATTACAGAAGGgagaaagtaaggaagttgaCCACTCCTAAATTGGAACAACTCGACGAGATTGAAGACGGTTCCGTAAACGATGGGCAGAATGATGAAATGCCAGTGAATTCAGATGATACGATACATGATAGGCCGAATTCTGAATCGAAAACAGCATTAAATATGAGTAGCCACGGGCTACTTGCTGGTCAAACGCTATTCTCCCATTTTGGGGTGGATACAGATGATTTCCCTCCAGAGCCACCGGCGCCATCGGCGATTCCGGTCGGTCACGTGGACATGGACCATTCGCCCACAAGAACCTTGCTCAACAGTAGTTCCATCCATAGAACGGATATCTCCGATTCTAAATACGAAATCAAGAAGGAGGCCATAGACATCAAATTCGAGACTTTGCGTTCATATGATCAGGACTCTTTGCTTGAGATGGATTCTCACAATTCCAGGATGTCTGGCGCTGACCTTTCCAGGGACAGCCACGAGGATCAGGATCAGTCGATGCATTCTATGTTGGTGACGCCTGAACTCATGGGACTTGTGCCGGGAGTGTCTAGTCGTACTGAAGATATATTGAATGGTAGTGGTGATATGTTGATGGGAAAAAATTCATCAGAATCGTCGAGGAATCACACGGGCGGTCCGAAGACTTGGACTCAAGAAGACATGGATATGGCGTTAGACGCATTAAGGAACCATAACATGAGCTTGACAAAGGCTTCCGCAACGTACGGTATTCCCTCCACTACCCTATGGCAAAGAGCCCATAGATTAGGAATAGACACTCCAAAAAAAGAAGGCCCAACAAAGTCTTGGACTGAAGAGAATCTAAATAACGCCTTAGATGCTCTAAGAACAGGAACAATATCCGCCAATAAAGCCAGCAAAGCCTTTGGTATTCCAAGTAGTACATTATACAAAATCGCCAGAAGGGAGGGTATTAGATTGGCAGCACCGTTCAATGCAGCCCCAACTACTTGGACACCCGAAGATCTCGAAAAAGCCTTGGAATCGATAAGATCTGGTCAAACGTCGGTTCAAAAAGCATCAACAGAATTCGGTATTCCAACAGGAACACTTTATGGAAGATGCAAAAGAGAGGGAATAGAACTTTCGAGATCTAATCCGACACCTTGGTCTGAGGATGCAATGGGAGAAGCCCTAGAAGCAGTCAGACTTGGTCATATGTCCATCAACCAAGCAGCCATCCATTATAACCTACCTTATTCATCTTTATACGGTAGGTTCAAGAGAGGTATAAAGTACGATTCCGAGAACTTGGAGGGAAATTCTGACAGCAACTCACACCTTGAAGTCGCTTTTGGTATGGACTATACCAATCCGCATCCACAACAGATTCAATATCAGAATCAAACCAGCtga
Protein Sequence: MTSQHYCLRWNNYQSNMTSVFHQLLRNEDFVDVTLACDDLSLKAHKVVLSACSSYFQKLLLNNPCKHPTIIMPQDISFSDLKFIIDFVYKGEIDVSQTELQSLLKTADQLRIKGLCESHNKENNPEFLHNQSSNVTRIRKSSHLRDEEPLDDYRREKVRKLTTPKLEQLDEIEDGSVNDGQNDEMPVNSDDTIHDRPNSESKTALNMSSHGLLAGQTLFSHFGVDTDDFPPEPPAPSAIPVGHVDMDHSPTRTLLNSSSIHRTDISDSKYEIKKEAIDIKFETLRSYDQDSLLEMDSHNSRMSGADLSRDSHEDQDQSMHSMLVTPELMGLVPGVSSRTEDILNGSGDMLMGKNSSESSRNHTGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSENLEGNSDSNSHLEVAFGMDYTNPHPQQIQYQNQTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00415795;
90% Identity: iTF_00349400;
80% Identity: iTF_00965294;