Mwil014747.1
Basic Information
- Insect
- Megachile willughbiella
- Gene Symbol
- -
- Assembly
- GCA_945859635.1
- Location
- CAMAOE010000098.1:352461-356947[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.013 1.7 9.6 2.4 1 23 384 406 384 406 0.95 2 18 0.00065 0.084 13.8 0.9 2 23 447 468 446 468 0.98 3 18 0.0032 0.42 11.6 2.2 1 23 579 601 579 601 0.93 4 18 0.0038 0.5 11.3 0.4 2 23 605 626 604 626 0.96 5 18 0.021 2.8 9.0 6.2 1 23 696 718 696 719 0.95 6 18 0.00032 0.042 14.7 0.6 1 21 725 745 725 749 0.92 7 18 0.02 2.7 9.0 5.0 2 23 830 851 829 851 0.95 8 18 0.00019 0.025 15.4 4.2 1 23 905 927 905 927 0.96 9 18 0.00024 0.031 15.1 0.7 1 20 932 951 932 953 0.94 10 18 0.035 4.6 8.3 0.5 2 23 964 985 964 985 0.97 11 18 1.1e-05 0.0014 19.3 0.7 2 23 1024 1045 1023 1045 0.97 12 18 2.2e-05 0.0029 18.4 1.6 1 23 1050 1072 1050 1072 0.95 13 18 0.00012 0.016 16.0 2.9 1 23 1078 1100 1078 1100 0.98 14 18 3.9e-06 0.00051 20.7 0.4 1 23 1116 1138 1116 1138 0.95 15 18 3.2e-07 4.1e-05 24.2 0.6 1 23 1144 1166 1144 1166 0.99 16 18 3.4e-05 0.0045 17.8 0.2 1 23 1172 1194 1172 1194 0.97 17 18 0.00013 0.017 16.0 4.1 1 23 1200 1222 1200 1222 0.96 18 18 0.009 1.2 10.2 0.4 1 20 1228 1247 1228 1249 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCGTAGAAATAAATACATCGGATTCACCGCAAAACGAAGAAGGCATCGTGTCGACGGTAGAAATATGCCGTGTTTGCCTTCTTGGTAATCTAGTGATGCGGGACTTGTTTCTGGAAAACGAGGTTGCTTCTCTTTCGGCGAAAGCGATGAGTTTCGCTAACGTTAAGATGTTACCTGGGGATGGTTTACCAGCCCGCGTATGCTGTGTATGCGCGGACAAACTGGAATCCGCATACGAATTTAAGTTACAAGTGGAACAAGCCGATACAGTTCTCAGAGAGAGATTTGTCACAATGAATATAAAAGAAGAGTTGTTCTTCGATGAAGTCGAAGTACACTTGGATACCAGAGAACGAAACGAGGGTATAGAAGGAATGCGTATAGAAAATCATTATCGAGATACTACAGAAACTTTACCACCGATGTCTCAGGAAGAGAAATCGTCTCTATTGAAGGATCAGCTGGATCTGTTGCAAATGGAAAAACTAACCGAAAATGAACAGGGTATTAGAGAGCAGAACAATGGCCAAGTAATGGAAGAAGTGATCGATCAAGCGATTAGCGCGGAACAGATATCGGAGGATCGTCTAAATCATGAAGAAGAGACCGTTAAAACTGTCGCGGATAACTCGAAAGACGACGAATCGTTGAAACATGAAAGCAGGGAGGACGATTGCATCGGAAGAATTGCGCCAATGGAACACGATTATATATTGCAACAAGAGTGTATATTGTCCGACGATGGTCAACGAGAGCATCAAGAAGAAGAAGAAGAAGAAGAAGAACAACCGCAAGAACAACAACAACAGCAGCAGCTTAACGATTCCGAAGAATCGTTTCCGCGAGAAGATTGCGCGGAATATGTAAATTTATTGGTAAAGGCGGCCGATGTAACGAATCAGGAAGACGAAGACGAGGACGAGGATGAACCAGGAGGTTCGGACGATACGAAACCGGATGTAAAAATGGAAGAAGGGTCACCGTGTCAGAACGAAGCTAGGAGAAGTAAACGTAAACTGGTTCGACGAAACCAAAGTATCGAAACGAAACGAGACTCCGACGAAGAAAATTATTTCGAAAATCTAAATTTAAGTTCGAGATTAAAAAATGTCGAAGATTCCGATAAATCCGATAAGATATTTTTCCTATGTTACCTGTGCGACAAAGAGTTTTTGTCGAAGAGCGTTCTGAAAGAACATATGCACACTCACGAAGAAGTTCGAAAAGCATTGTCTCTAAAAAAGACGTTAGAGACGTTAGAAACGTTCGAAACGCCGCAAAAGAATGTTAGCAATCCCGTCAAATCCCCCCCGTCGGGTAAAAGATCGAATAAATGCCCTTACTGTGGCAAACAGTACATCTATATAATTTCGTTTAGTAAACACTTGAAGAAACACGAACGGGAGAAGGAAGAAGGAAAGGAAGAGCCGATGCCGTTAGAAATTTCATTTCACGAGGACGAGCATAGTTTGGATCTTGACGATTACGAGGAGGCGCAGCGTTCGAATGTCGAGTTTCGAAGAAGAGCCAAAGGAAAAGACGGTTTCGACAGAACGAAGACGAAGAAATCGGTAGAAGAAGGCGAGTTCGAAGAGGAGGACGAGGAACAAGAGCAGGAGGAGAACGAAGAGGAAGAAAGGGGGAAGGACGAGGATAGAGGCGATCAAGGAGAGCACGGTTGGAACGGAGAAGAGAAAGAAGGAAGTCAGGGCGTTCGCGCGGAAATGTTCGCTTGCGATAAATGCTCGCAGAAATTCTATACCAAGCGCGGTTTACGGAAACACTCGGTTTCGCACGTTGTTCTTAAATGCAGCGTTTGCGAAGAAGAATTCGATTCGATGGAAAAGCTTAGAAACCATCGTGCGAAGCACGTGGTCGAGGGCGTATTAAGCGAACAAGACTTCGAAGCGGATACGGAGTACACGATCGACGAAAGAACCGACGATCGCGGAACAGACGGGAAAGGAAACGATGGAAAGGTCCAAAATGGAGAGGATGGGGCCGAAGTGGAACGATTTGAAACGGATAACAGATCGGGCAAAAGCGACAGAAATACGGAGACGCACTCGGGGATCGAGTACAATTGCAAGACGTGTTGTCAGCGGTTTCCGAGGAAAGATTCGTTGCTGAAGCACATGGAACAGCATCACGAACGCGCGAAAGCTTACAAGTGTACACAATGTAATAAAACGTTCGGCAACGAACTTACTTTACGAAATCATCTTATAGCCACCGATCATAAAACTTTCGTTCACGGGCAAGAATACGATCCTAATAAGCGCATTAAACGAGTCGCCGCGAGAGCGGCTCAGAAGATCATCGATCAGATTAAAACGGAGGACGGTTTagaggattacgacgacgatgacgacgaggacgATCAGAGCAACGTCAGGCTCGATCGCGTCGGTTCAGGGTTAGACGGTCGCGGTAAACGAGAAACGTCGATGCAAAAGAAGCACAATTACAAAAAGGAGCTGGAATGCGTGAGTTGCAATAAAAAATGCTGTTCGAAGCAGTCGTTGGCAAAACACATGGAACAACACGTGAAAGACGAACGAAGCGTAAAATTGGAAAAGCAGAAACAACCGGCGGAGAAAAAGGGACCACGGAACTGTACCGGTGAACGCGTCGATAACGGAGAGAACAAAGATGACGATTACGACTCGGATTTCGAGAGTGGGTTAGACTGGCCGATGGACAATCACGAGTGTGCCAAGTGTAAGAAACGGTACAGTACGAAAAAATCATTGTTGCGACATCAGTTATTGCACGAGGAGCCGAACTTCGAATGCGACATCTGTAACGTGAAATTCTACCGTAAAGACAAATTGAAGGCTCATTACGACAAATGTTCGGAAAAGAATCCTGATCAAGTGAGAAAGTGCAACATCTGCGGAGATAGTTTCGAAAACAACGAAATCCTACGAGAGCACAGATCGAAACACGTTACCGAGGGTATCCTTACCGAGGAAGATTTGAGGGATACAGAACCGCGGCCGGAAGAGAAAAAACCGGGCGAGAAAATCGGCCGGAAGAGAAGAACCGACATCGTCGGTTTAGAATGTACCGAATGCAACAAACGATACACCTCGAGGAAAGGACTATTACGACATATTCAAGTTCACGAGGGGAAGAAATACCTGTGCGATATATGTCCGAAAAAGTTTTACAGGAGAGAACATTTGAAGATACACGTAGCTAAGCATAATATGATAAAACCGTACAAGTGTACTCGTTGCACCAAGCGTTTCATTAAAGAGGAGCAATTGACCAATCATTTGTCGAAGCATGATCGTACTTTCAAGAAGAATAAAGAAACGGATAGTTCGAAGAGATTCCTTTGCGAGATCTGTTCGAAAAGTTTCACCCAATCGACCACGTTAATCGCTCATCTTCGAGCGCACAACGGAATCAAACCGTACGTTTGCGAAGTTTGTTCGCGACCGTTTACAACGAACGCCTACCTAAAAATGCATATGAGAACGCATACGCAAGAACGACCGTATATCTGTCAGTACTGTTCGCGAGCATTCGCCAGGGCCGATACGCTCGCTAATCATTTGACTTCGCACACGGGCGAAGCCAAGTATCATTGCAAATATTGTCCGAAAAATTTCCGTCGTCTGAAATCCCTGAAAGAGCACGTTTTCATTCACACCGGTCAGCGGCCTTACGCTTGTCCAACCTGTGATCGACGGTTCAACAACAACGGAAGTCGTTACGCTCACAGTAAAAGGTGTAAACAAAATTTCGTTCAAAATCAGACTCAGAACCAGAGTCAGAATCAGACTCGTGGTCAGATATTGGCCACGCAAGCGCAGTCGATTCAAACTCAACAGAAAGTGTTACATCAGGCTACTCTTGGACAATGTCAAGTAGTGAAGGCACAGAATATCAAAACGATCACTATTACCAGACAATCTGAACCGGTTACTGCTCAACAGGTTATGCAACATCAGGAAATACTGATGCCTTTGATTCTTCCGCTTACCGTCACTCTCGCCGACGTTGGCGAAGAAGTTATATTACCAGAGGGAAGTAAAATATTTACTACCACTTAA
- Protein Sequence
- MDAVEINTSDSPQNEEGIVSTVEICRVCLLGNLVMRDLFLENEVASLSAKAMSFANVKMLPGDGLPARVCCVCADKLESAYEFKLQVEQADTVLRERFVTMNIKEELFFDEVEVHLDTRERNEGIEGMRIENHYRDTTETLPPMSQEEKSSLLKDQLDLLQMEKLTENEQGIREQNNGQVMEEVIDQAISAEQISEDRLNHEEETVKTVADNSKDDESLKHESREDDCIGRIAPMEHDYILQQECILSDDGQREHQEEEEEEEEQPQEQQQQQQLNDSEESFPREDCAEYVNLLVKAADVTNQEDEDEDEDEPGGSDDTKPDVKMEEGSPCQNEARRSKRKLVRRNQSIETKRDSDEENYFENLNLSSRLKNVEDSDKSDKIFFLCYLCDKEFLSKSVLKEHMHTHEEVRKALSLKKTLETLETFETPQKNVSNPVKSPPSGKRSNKCPYCGKQYIYIISFSKHLKKHEREKEEGKEEPMPLEISFHEDEHSLDLDDYEEAQRSNVEFRRRAKGKDGFDRTKTKKSVEEGEFEEEDEEQEQEENEEEERGKDEDRGDQGEHGWNGEEKEGSQGVRAEMFACDKCSQKFYTKRGLRKHSVSHVVLKCSVCEEEFDSMEKLRNHRAKHVVEGVLSEQDFEADTEYTIDERTDDRGTDGKGNDGKVQNGEDGAEVERFETDNRSGKSDRNTETHSGIEYNCKTCCQRFPRKDSLLKHMEQHHERAKAYKCTQCNKTFGNELTLRNHLIATDHKTFVHGQEYDPNKRIKRVAARAAQKIIDQIKTEDGLEDYDDDDDEDDQSNVRLDRVGSGLDGRGKRETSMQKKHNYKKELECVSCNKKCCSKQSLAKHMEQHVKDERSVKLEKQKQPAEKKGPRNCTGERVDNGENKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDTEPRPEEKKPGEKIGRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFVQNQTQNQSQNQTRGQILATQAQSIQTQQKVLHQATLGQCQVVKAQNIKTITITRQSEPVTAQQVMQHQEILMPLILPLTVTLADVGEEVILPEGSKIFTTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122592;
- 90% Identity
- iTF_00963981;
- 80% Identity
- -