Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_945859635.1
Location
CAMAOE010000042.1:608617-611469[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.29 2.1e+02 2.5 0.0 3 18 163 178 162 179 0.92
2 5 1.3e-11 9.5e-09 35.6 0.9 1 45 265 311 265 312 0.95
3 5 1.8e-07 0.00013 22.4 0.6 4 42 322 364 321 366 0.95
4 5 8.7e-13 6.4e-10 39.4 0.0 1 44 374 418 374 420 0.96
5 5 1.5e-09 1.1e-06 29.0 0.1 3 41 429 467 428 469 0.97

Sequence Information

Coding Sequence
ATGAACGAATTAACAAATTTTGATGATTTCTTCGAATCACTATCGGTGGAAGATATCTCACCCAAACATGAAAATACAATTGATTTTAAAATTGCCCGTGAAGTAAATAAACTCGAAGAATGTAACCTCTCTGAAGAATCCATTCAAGATTATCCAGCACAAGAAAAATACGAAAATGCAACAGACGTTACGGAATACGACGTCGAGGATTGTAACGATGCATTGAATTTGAATAAACAACTAATCTCTTCTCTGTTGGATTTAAAAAGACACATAAACTTTGCTCTTCAAAAATGTGAAAAAAAATTGGCAGTAATAGAAACCAGTTTACAGAAACACGCAGTTGGAGATGCAAAAGTTTTAATTTGCAATGCTGGTATACCTTACTTCAAAGATAGAAATTATTTTTTTGCACCCAATAATGAAGATGAAATATTGAAGGAAAGTCAGAAAGAACTACAACTCAGAAACCTGCCTAAAGTTTGCCCATGGACAATGAAAGAAAGAAATACATTACTAGATGCAATCAAAGAAGAAGCTTATGCAGATGTACTGTGCCCTCAAAAGGAAGATGATGAAATAGTCGATGATGTATCGGTTGATTCCACCCATAATATTAAAGACAAGAAGAAGGCTAATGAAACATTCCCTACAGATTTTTCAGCTTTGATCGGTCCATTGAAAGAAAAAGAATTCGATTGGTTTAAAATATCATCTATTCATTTTGATGATATACATTCTCCGCTAGATTGTCGTGTTATGTGGAATGTATTTCTTCATCCTGACATCAATAAAAATGTTTGGACAAAGTTGGAAGATGTTAAATTAAAAGAAATAGCAAAGAAACATAAATTTCAAAACTGGGACAAAATTGCAGAGGAATTGGATACAAATCGTACAGCATACCAATGTTTTATTAGGTATAACACAACTAAAAAACTGCCTAAAGTTCAAAATTACACATGGAAACCAGAAGAAGATGAAAGACTTTTGAAACTGGTGGAAATATTTAAGATTGGTGATTTTATTCCTTGGGGTGAGGTAGCCAATTGGATACAAAATAGAACTAAACAGCAAGCTTATTTCAGATGGACATACAGTGTAGCACCTTATTTAACTAAGGGTAGATTCACTAAAAACGAAGACAGACTTTTAAAAGATGCAGTCAGCAAGTATGGTACAAATTTTCGTAAAATATCTGCAGCATTGATGCCCAACAGATCAACTGTTCAACTTCATGATCGTTATGAAACGTTAACCAACAATCAGATTGAAAATTGGAGGGTATGGACGTTTGCGGAAGATTCTAAATTGATGGATCTCTATGCACGCTTTGGTCCAAGTTGGTCGAGAATAGCTAAAGCATTTTCGCATAAAACGAGAACCCAGCTAAGACATCGGCACAAAGCTCTGCAGAAGTACATTAAAAGAGGCAAAATTTCCTTGGTTGACTTACATAGAAAGCAGTATTTGAATGCAAATGAGACAAGAaagacacagacagaagcgataccttgcaacgatacgtatgatcatagaatcggttcgttcaataaacacgatgacaatgacaatgatgtcgacgatgacaatgacaatgacaatgacgatgatgatgacaatgacaatgacaatgataatgataataatgatgacgatgatgatgtcgatggtaataacgtagacatagaattgatcaaatactttcatgaaaaacaACAAACCAGATCTACTCGGAAGAGTAAGTTTTATACTAGCAAAGAGTTAATGCGCGATACAAAAAATTTATACGATATTTTACAACAATTAAATGCTAAACTTTTCATACCCGACAATGTCACTGATATTGATTTAAATGACAGAGATCAACAACTTTTATGTTCGTTGAAAGAATACGCTATGCTGAAGTCTGATCAAGAAAAACGCTGTGAACTTATAGATAAATACAGTGTACGTATGTTCGGAGAAAATCATAATAAACAAGGAGGTTCTTATTTTATACCGCCTCCTCCTTTTGATTCGCGAGTAAAGTTAAAGAAATCTGTGGCAAATAACTGCATCGATTACAATTTAAACGTAAAGAATAAGTTTTTGCTCGAAAAACCAATAGAAATGGATACTCCAGATTTCATTATTTCTCAAATTGGTGGTCACGAGCAACAATTACAATTTCAAAAGATTAGTCGGTGCTTTCGAGTTACCAATGCCGGCGATAAATGGTGTTATCTTCGAAATATTCCAATACGTCAACATCAGCGCAATAATGATACTGGTATCAATAGGAACGATTCGAACGGCAATAAATTGAACAAGAGTGGATCAATACATTTGGATTATGAACATATTACCATGTTTAATACATTATCCGAAAGAAAGGACCTCGATACTCGTAGGTGCGCTAAGCTGCAGAACAAACATCATAAAAAATCGCGTGTGCAAATTGTTAAAAAAAATTACGCGTTATTTAATATGCCTGAAGAAACGTTGTATTCGTCGCCTACCTCCGAAACGGAAATAACCACGGACAAAGATGTGCCCGCGATACAAGCAACCCATGCGACTGTATCTAGTTTGAAGAACTTAATATTTTCAAGACGATCGACTGAAAAATATATGAGATTAAATAAGTGTATAGCACAACGCTCGTATCGATGTCAAGAAGCCCTTAAATTATTGGAGACGCGTTTAGAACAATTATTTCGGTATCCGATAGGTTTGTCCAAAACAGCGTTGCCAGAAGTGTATGTGATAGATACGATCGATGACATAAACTCAGATGGAAAAAGAAAATCGTCCGAGGTGTCAGATACATTAGAAGAACTATCAAATAAAAAAGTTACGAACGTTAGATAA
Protein Sequence
MNELTNFDDFFESLSVEDISPKHENTIDFKIAREVNKLEECNLSEESIQDYPAQEKYENATDVTEYDVEDCNDALNLNKQLISSLLDLKRHINFALQKCEKKLAVIETSLQKHAVGDAKVLICNAGIPYFKDRNYFFAPNNEDEILKESQKELQLRNLPKVCPWTMKERNTLLDAIKEEAYADVLCPQKEDDEIVDDVSVDSTHNIKDKKKANETFPTDFSALIGPLKEKEFDWFKISSIHFDDIHSPLDCRVMWNVFLHPDINKNVWTKLEDVKLKEIAKKHKFQNWDKIAEELDTNRTAYQCFIRYNTTKKLPKVQNYTWKPEEDERLLKLVEIFKIGDFIPWGEVANWIQNRTKQQAYFRWTYSVAPYLTKGRFTKNEDRLLKDAVSKYGTNFRKISAALMPNRSTVQLHDRYETLTNNQIENWRVWTFAEDSKLMDLYARFGPSWSRIAKAFSHKTRTQLRHRHKALQKYIKRGKISLVDLHRKQYLNANETRKTQTEAIPCNDTYDHRIGSFNKHDDNDNDVDDDNDNDNDDDDDNDNDNDNDNNDDDDDVDGNNVDIELIKYFHEKQQTRSTRKSKFYTSKELMRDTKNLYDILQQLNAKLFIPDNVTDIDLNDRDQQLLCSLKEYAMLKSDQEKRCELIDKYSVRMFGENHNKQGGSYFIPPPPFDSRVKLKKSVANNCIDYNLNVKNKFLLEKPIEMDTPDFIISQIGGHEQQLQFQKISRCFRVTNAGDKWCYLRNIPIRQHQRNNDTGINRNDSNGNKLNKSGSIHLDYEHITMFNTLSERKDLDTRRCAKLQNKHHKKSRVQIVKKNYALFNMPEETLYSSPTSETEITTDKDVPAIQATHATVSSLKNLIFSRRSTEKYMRLNKCIAQRSYRCQEALKLLETRLEQLFRYPIGLSKTALPEVYVIDTIDDINSDGKRKSSEVSDTLEELSNKKVTNVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00961750;
80% Identity
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