Mrot000083.1
Basic Information
- Insect
- Megachile rotundata
- Gene Symbol
- SNAPC4
- Assembly
- GCA_000220905.1
- Location
- NW:1077330-1080906[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.048 37 3.7 0.0 3 18 163 178 162 179 0.93 2 5 5.1e-12 4e-09 35.6 0.9 1 45 264 310 264 311 0.95 3 5 6.8e-08 5.2e-05 22.5 0.5 3 42 320 363 318 365 0.95 4 5 1.3e-12 9.8e-10 37.6 0.0 1 44 373 417 373 419 0.96 5 5 1.4e-10 1.1e-07 31.1 0.0 3 41 428 466 427 467 0.97
Sequence Information
- Coding Sequence
- atgaacgaaataacaaattttgacgATTTCTTCGAATCACTGTCAGTGGAAGATATCTCACCTAAACATGAAAAtacaattgattttaaaattgcccGAGAAGTAAATAAACTCGAAGAATGTAACCTCTCTGAAGAATCCATTCAAGATTATCCATCaccagaaaaatatgaaaatgcaGTAGACGCTCCGGAATACAATGTTGAGGATTGTAATGATGCATTGAATTTGAATAAGCAACTAATCTCTTCTCTGTTGGATTTAAAAAGACACATAAACTTTGCGCttcagaaatgtgaaaaaaaaTTGGCAGTAATAGAAACGAGTTTACAGAAACACGCAGTTGGAGATGCAAAAGTTTTAGTTTGCAATGCTGGTATACCTTACTTCAaagatagaaattatttttttccaaCCAATAATGaagatgaaataataaagGAAAGTCAAAAAGAACTGCAGCTCAGAAACCTGCCTAAAGTTTGTCCATGGAcgatgaaagaaagaaatacgCTGCTGGATGCAGTCAAAGAAGAGGCTTATGCGAATGTACTGTGCCCTCAAAAGGAAGATGATGAATTAGTCGATGATGCATCAGTTGATTCCTCCCACaatatcaaatacaaaaagaagaaTGATACATTCCCTACAGATTTTTCAGCTTTGATCGGTCcattgaaagaaaaagaatttgattGGTTTAAAATATCATCTATTCACTTTGATGATATACATTCTTCACTCGATTGTCGCGTTATGTGGAATGTATTTCTTCATCCTGAcatcaataaaaatgtttggaCAAAGTTGGAAgatgttaaattaaaagaaatagcGAAGAAACATAAGTTTCAAAACTGGGACAAAATTGCAGAAGAATTAGATACAAATCGTACAGCATATCAATGTTTTATCAGGTATAATACTACTAAAAAATTGCCTAAAGTTCAAAATTGCACATGGAAACCAGAAGAGGATGAAAGACTTTTAAAACTGGTGGAAATATTCCAAATTGGTGATTTTATTCCTTGGGGTGAGGTAGCCAATTGGGTACAAAATAGAACTAAACAGCAAACTTATTTCAGATGGACATACAGTATAGCACCTTATTTAACCAAGGGTAGATTCACTAAAAATGAAGACAGACTTTTAAAAGATGCAGTCAGCAAGTTTGGTACAAACTTTCGTAAAATATCTGCAGCATTGATGCCTAACAGATCAACTGTTCAACTTCATGATCGTTATGAAACATTAACCAACAATCAGATTGAAAATTGGAGGGTATGGACGTTTGCAGAAGATTCTAAATTGATGGATCTCTATGCACGCTTTGGTCCAAATTGGTCAAGAATAGCTAAAGCATTTTCGCATAAAACGAGAACTCAGCTAAGACATCGGCACGCTGCTTTGCAGAAGCACATTAAAAGAGGCAAAATTTCTATGGTTGATTTACGTAGAAAGCAGTATTTGAATGCAAATGAGGTAAAAAAACCACAGACAGAAGAGGTATCGTGCAACAATACGTTTGATCATAGAATAGGTTCGTTCAATAAACACGATAACAATGACTACGATGTCGATGATGACAACGACGATGATGATGACAATGACATTGATAataacgacgacgacgatgatgTCGATGATAACAACGTAGATATAGaattgatcaaatattttcatgaaaagcAACAAACCAAACCTACTCGGAAGACTAAGTTTTATACTAGCGAAGAGTTAATGCGcgatacaaaaaatttatacgaTATTTTACAACAATTAAATGCTAAGCTTTTCATACCTGATAATGTCACTGCTATTGATTTAAATGACAGAGATCAACAACTTTTATGTTCGTTGAGAGAATACGCTATACTGAAGTCTGATCAAGAAAAACGCTGCGAACTTATAGATAAATATAGTTTACGCATGTTCGGAGAAAATCATAATAAACAAGGAGGTTCTTATTTTATACCGCCTCCTCCTTTTGATTCGCGAGTAAAGTTAAAGAAATCTGTGGCAAATAACTGCATCGATTACAATttagatataaataataagttcTTGCTCGAAAAACCAATAGAAATGGATACTCCACATTTCGTTATTTCTCAAATTGGTGGTCACGAGCAACaattacagtttcaaaagATTAGCCGGTGCTTTCGAGTAACCAATGCCAGCGATAAATGGTGTTATCTTCGAAATATTCCAATACGTCACCATCAGCGCAATAATGATAATAGTATCAATAGGAACGATTCGAACGGCAATAAATTGAACAAGAATGGACCAACACATTTGGATTACGAACACATTAccatgtttaataaattatccgACAGAAAGGACCCCGATACTCGTAGGTGcgccaaattacaaaataaacataaaaaatcgCGCGTGCAAATTGTTCAGAAAAATTACTCGTTATTTAATATGCCTGAAGAAACGTATTCGTTGCCTACCTCCGAAACGGAAGTAACCACGGACAAAGATGTGCCCGCGATACAAGCAACCCATGCGACTGTATCTAGTTTGAAGAATATAATAGTTTCAAGACGATCGACTGAAAAATATATGAGATTAAATAAGTGTATAGCACAACGCTCGTACAGAGGTCAAGAAGCCCTTAAGTTATTAGAAACGCGTTTAGAACAATTATTTCGTTATCCGATAGGTTTGTCAAAGACAGCGTTGCCAGAAGTGTATGTGATAGATACGATGGAGGACATAAACTCAGAACATGGAAAGAGAAAAACGTCCGAGGTGTCAGATATATTAGAactatcaaataaaaaagttacgaacgttagataa
- Protein Sequence
- MNEITNFDDFFESLSVEDISPKHENTIDFKIAREVNKLEECNLSEESIQDYPSPEKYENAVDAPEYNVEDCNDALNLNKQLISSLLDLKRHINFALQKCEKKLAVIETSLQKHAVGDAKVLVCNAGIPYFKDRNYFFPTNNEDEIIKESQKELQLRNLPKVCPWTMKERNTLLDAVKEEAYANVLCPQKEDDELVDDASVDSSHNIKYKKKNDTFPTDFSALIGPLKEKEFDWFKISSIHFDDIHSSLDCRVMWNVFLHPDINKNVWTKLEDVKLKEIAKKHKFQNWDKIAEELDTNRTAYQCFIRYNTTKKLPKVQNCTWKPEEDERLLKLVEIFQIGDFIPWGEVANWVQNRTKQQTYFRWTYSIAPYLTKGRFTKNEDRLLKDAVSKFGTNFRKISAALMPNRSTVQLHDRYETLTNNQIENWRVWTFAEDSKLMDLYARFGPNWSRIAKAFSHKTRTQLRHRHAALQKHIKRGKISMVDLRRKQYLNANEVKKPQTEEVSCNNTFDHRIGSFNKHDNNDYDVDDDNDDDDDNDIDNNDDDDDVDDNNVDIELIKYFHEKQQTKPTRKTKFYTSEELMRDTKNLYDILQQLNAKLFIPDNVTAIDLNDRDQQLLCSLREYAILKSDQEKRCELIDKYSLRMFGENHNKQGGSYFIPPPPFDSRVKLKKSVANNCIDYNLDINNKFLLEKPIEMDTPHFVISQIGGHEQQLQFQKISRCFRVTNASDKWCYLRNIPIRHHQRNNDNSINRNDSNGNKLNKNGPTHLDYEHITMFNKLSDRKDPDTRRCAKLQNKHKKSRVQIVQKNYSLFNMPEETYSLPTSETEVTTDKDVPAIQATHATVSSLKNIIVSRRSTEKYMRLNKCIAQRSYRGQEALKLLETRLEQLFRYPIGLSKTALPEVYVIDTMEDINSEHGKRKTSEVSDILELSNKKVTNVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00964395;
- 90% Identity
- iTF_00961750;
- 80% Identity
- -