Basic Information

Gene Symbol
JARID2
Assembly
GCA_945859635.1
Location
CAMAOE010000053.1:2706099-2712863[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 10 2.4e+04 -3.9 0.1 68 82 161 177 144 178 0.57
2 2 9.5e-23 2.2e-19 70.0 0.0 6 89 1372 1453 1368 1453 0.94

Sequence Information

Coding Sequence
ATGGTGTTAAGTCGAAATGATAAAAGAAAGAGAAAAGAAGGAGATTTAGTGGATCTTATGGAACCACTTTCAGAATCTCCAAAGAGAACTAAAGTGCATGCACAAAGAAAATTTGCGCAAGGAGCAACAAATGTTTTTAATCCTACACATACTCCCATTAAGGATAAAGAGAAAGCTAAACCAGCAGTTATAACTGAATTAATAACACATAAACGACCAAATACAGAAGATTTCTTAACATTTCTATGCTTTAGAGGAACATCAATTTTACCTCCAAGTTTAAATTTTTTCAATGTTGGAAACAAGAAAGAAAAGTCTGAACCCAAACCATTACGTACATCAGTTGATAAGACTGTATGTCCTAGTACTACATCTAATGAAAATCAAAAATTAGATACGAGTCAAAAAACAGTTACCAGAGTAAAACCTGCTGTTAATGATAAAAAGAAAGTTTCAGGTACAATACAAAAAAATATTAATACATTTAAAAGTGCTACTTCTACTGTACAAGCACTCAAGAAAAAATATCAAGAACAACGTCTTGCTAAAGAAAGGATTAAACATAAATTTAAAGCATCCTGTGTTATGAGAACAAGATCTTGTACAGAAAGGACAATGTTAAAATCCACAAATCAATTAGCCCCCAGAAAATTTCTTCCAAGAATTGAAACTAAGAGACTTGGTTTAAGGAGCAGTGTACTTGCAGACAAAATGAAAAAGACTTCTCCAAAAGTTAAATCTGTTCCACCTAAACCAAAGAAAAAAGTTACCATAAAACAAAATAATAGTGATACATCAAATTCAGACTCCACATCTGAATATGAAGAGGAAGGTCCTTCAGAGAAATCAGTATCACAAATAAAACGTACAGTTCAAAAGAATGTTCAAAAAAATATGTGTACTAGAAGTAAATCTGAAACAAGAAGAATTACTCGATCTCATACTGGGACAATTTCACCAAAAAATCTTAATAAAAGACCAACAAGAAAGACAAAAGAAGCAGCTGCAGTATATATGGAAATTCTTGGAAGAAAACTTGTAAGTCCTGATTTAGAAAATGATGATAATGGATCTATGGACAGTTTTCCAGAATTACCAAATGCACGTAAAAGTGCTCAAACAGAAAATGAAGCTAAAGTTAAAGTAAAACAGTCTGCTTCAAAACCAGTTACTAAAACTAAGGATGGTAAAGTTACTGCTATCCACAGTGTAGCGAAAAAACGATTAGACAAAACTACAGTGAGTAAAATTGCTTTCAAAAGTAAAAGACTAATAAGGGTTCAGAAATATTGTGAAATAGATAGCGACGAAGATTCAGTAAGTTCTTCTAATGACACTAGTAATAATAACAATAATAATAACAATAATACAAGGCCTGTTACAAGACGAAGTTTAGGAAAATTAAATAAACCCGCAAGTCGATTTCTTCGATCTTCTACGAAAAATGTAGTTACGCGAATTGAGGTTCAAAATAATGTAAATATTAAACCGAAACCCCAAGTTCAAAGTAATGTACGATTTAATAAGGAGAAATTTGTGATAAAACGTAAACGAGAACAAAATTTTAGTAAATCATTACCTGAAAAAGGTAGTGAATTAAAACAAAAAGAAACAAAGGTGCAAAGTAATGCAGATGGAACTGCAGATTCTGACGAAGAAACTTTAGGAACAGTGCTTAATAAAATAAAGAGAAAGAAAGATGATCATCCACAAACTGAAGAAATTTCTAGTAATAATAACAACAACAATAATTGTGATGTTACAGATAAGGTTGAACAATCTTTGGATGAGAATTCTATAAAGGTGGATCTTTCAAAAGTATCAGATGATGAAGAATCTTTTCGCGGATTTACAAAGAAAACAATATCTAAAGTATTAAACTCTTGTCAAACCCATGTTAATGCTAATCTTCTAGTTGCAGAGAAAACCGCTGATACACCAAAGCCAACTAAAATAGAAGATGTGAAAAATTCAGATCCACCTAATAATAAAGAAGAAAACACAGAATTAATAAATAATGAATCTTTCTTACACAAAACATCTGTTGTAGCAAATGTGCCAAATAATCAGTGTACCCAATCTGAAAGAATGCAAAAGGCAAAATTGAAATCATCTAATGAAATAGAATTTATGAAACATATTGAAAAAGAATGTCATCATAAACCAGAAATGTCTTCTGGAAATGATGTAGATATATCTTTATCAACATTACATGTAAGGAAAGAAAAAGTGAACATGTCAACTGAACAAATTGAGAAATGGTTAAATGAAAGTTCATTTGCTAAAGAAGAGAGTAAGTTGGAGATGGAAAATGTATCTACTTTTAAATATGATATCTGTGAGAAAAAGGCGGATGTATCGCATTTATCTATTTCAACAAAGATTCAACATTTGGTAAGACCAGTTAATGTTACACTTTCGAAGTTGGCAGAAAAGGCAAACGCAAAAGATCGTATGAGTATACAAAGTAAATTTATATCTACTACAATAATAGATACGAAATCTAGTGATATAAAGCAAGAAAATGAATCTACTACTGTGAATAAAAGTAATATAGATTTGAAAGATGTTAATAAAGGACGAAATGCAAAATTATGTAAAGATTTATGTGCTGGAGAAGAAAGCGATGGTACATTAAAATCTGATCAAATTGTAGCAGATGGAATTGGTGAAAAGAAATTGTCAAGTGAGAAGAAGACCATATTTCAGCCAAGAAAACCATTTTTACCGAAAGTTAAAGAACGCAAAACAGTCATTCCTAATGCAAATGCATTTTCTCCAGAAAATGAAAGTAGTGTTTATGCATTTGAAAGCGATACTGAGATTCCAGTTAATACTCCATTTAGACGTAAAATTCGTGAATCGACCAAATCAAATGTAACTACTGTTTTGTCCGAAAACACTGAACAAAAGTCTGAAATTGATACAAATAAATCTGAAAATAATGCAAATAAAACTGTAGAAAAGATGATTACGGATAATAGTGAGATATTGGAATCAAAAGAGACCTCCAATAATATCCTCTCACAAAAAGAATGTGAAACAATTGAAACAAAAAATACATCAAATACTACACTGAATATAAATAAATTTGAATTACCCAAAAATTTTGCAACTTTAGCTAATATACAAGTTCTACCATTGGATAAGTTAACTACAACTTGGAGTAATGTAAATTGTAGTGCATCAATAGCTGTGCAAGTAAATCTTGATGATAATGCACAAACACAAGAACAAACAGGAGAAGGAGATTCAAACCAACATAAAAGCACAGAAATATCTACACAAACTGAGAGTAATAACGAAAATGATGATGAAAATGATGGTCAACTATTTTATATACCATTACAAGCAGTTACAAGAAATGGACCAAATTTAGTTCAAGGGCAACAATTAATTCAAGGTGTAGCTGTTAAACTTGGTACTGAAGGACCAAATGGACCTAATCAAAAAGTTCTTTTAAGAGCCAAATTAGTTACAAAACCTCCATCATCTATCGCACGTTGTCCTCCTGTGGGTACTGTACAACCCACAACTCGTACTCCACCAAATTCTACTTTTGTAACTACAGATCACTCAACACCATCTACCTCTTCAAGTGTTACTTCGGTTATCCCTGCATCTAGTTCTGAAATTCAGTCAACTTCTCCATGTAAAAATGAAAACATAATACAAACTGTTAACAAACAGAACACTGGAATTTTATCAAGTACAGGAACAGAAAAATTACCAAAATCTCCAAAAACTTCTAGAGAGAGAAAGACCTCCATTGACTCAAATAAAAATGGAAAAAGATGTCAAATCAAATCAAAACAAAAAAGTGCCGAAGTTTATTCACCATCTAATAATGTAACATTTCCAAGTGCAAAAGACCTAAACAGTGAAGCATGTTTAGTTGAAGCTCCAACATTTCATCCTAGTGAAAAAGATTTTCAAGATCCTTTAGAATATATAGACAAAATAAGACCAGTGGCAGAGAAATTTGGAATATGCAGAGTTGTACCACCACCAAATTTTAAACCGGAATGTAAAGTGTCAGATGACATGAGATTTACTGCTTATAATCAGTATGTACATCGCATGCTTCATAGATGGGGACCTAATGTGAAAGAAATGATGGCTATAAAAAAATACTTGGCCACACAAAGTATAACATTGACTCACCCACCTTGGATTGGTGGCATGGAAGTTGATTTACCTCATTTATATCAGACAGTTCAAAGCTTAGGTGGATTAAAGGAAGTCATTGAAAAGAAAAAGTGGCAAAAAGTCGCTGATGGTATGAAGATACCAAAATCTGCCCAAGATCGTGTAACTAAATTAGATGACATTTATTGTAAATACTTATTACCGTATGATACATTATCCCCAGAGGAAAGAAGCAAATTATTTGATGAAGTTGAATCTGAATGGATAAAACGGGAAAGTAGAGCTTTACAGAGACAAAATGCACCAAGTACTGAAAATGAAGAAGACGAAGAAGATGATAGCTCCGATGAAATTGAAGAATGCATTGTAAAGGGTAGAAATATGCCATTAAATGCTTTCTATCGTATCGCACGAAACACACAACGTATGTGGTTTGGTGAAAATCAACGATCCGGAAATGAAGCTGAAGGTGCTTCTGCTGATGAGGTTGAAAGTGCATTTTGGAAACATGTTGCAGAACGAAAACGGCATGTATGTGTACATGCTGCAAGCATTGATTCAAGTGGTCGTGGTTTTGGATTCTCTGTTGCAAAAAATAGTCCATTTGCAAGACATCCATGGAATCTTAAAGTACTCACTAATAATGCTGGATCAGTGTTACGAGCTTTAGGTCCAATAATGGGTGTGACAGTACCAACACTTCATGTAGGAATGTTATTCAGTGCATGTTGTTGGTATCGCGACCCCCACGGTCTTCCTTGGATAGAATATTTGCACACTGGTGCTAAAAAGATTTGGTATGGTATACCAGATGAACATAACAATAATTTCAGAGAAGCTCTTTCAAAAATGGTACCACGATACTGTAAAAATAAAACTATATGGTTACCATCAGACACAGCAATGGTTCCTCCTGAATTGTTAGTTAGTAATGGAGTATCATTGTGTCACACTGTACAAGAACCAGGACAATTTATAATTGTATTTCCTAAAGCATTTACATCAAGCATATGTACTGGTTATGTGGTTTCTGAAAGTGTTTACTTTGCACAACTATCGTGGCTAGAAACTGCGGAACAAGTATTTAAAGACATACAAGATAGCTGTGAACCATCAATTTTCTCATTTGAAAGATTATTATTCAACATTATTAACGATTCTAGATCTCATATAGAAGTGTTAAAACAGATTTTGCCAAGTGTAGTTAAAATTCGTGAAAAAGAAATAAGTTCTCGAAAACAGTTAGTATCGGTGGGTCTTTTAAATACAGAAAGATTACCTCTGCCAGATAGTGGAAAACGAAAAAAAGGAAAGAAAGTGAAAGAAGATGATGGTGATTTTGAATGTGAAGTTTGTAGAGCTAATCTATTTGTTTCATTGGTTAGTAATTCCCAAGATGACAGTATTTACTGTTTGCCACACGCATTGCAATTATTTAACAAGAAAAAACAAACTTTAAAACATTGTACTTTAATGTATACATACAATGAGGATGAATTGGACGAGTTAATCCATAAGCTGGAAGAAAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATCAAACAGACAAAGTAA
Protein Sequence
MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATNVFNPTHTPIKDKEKAKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGNKKEKSEPKPLRTSVDKTVCPSTTSNENQKLDTSQKTVTRVKPAVNDKKKVSGTIQKNINTFKSATSTVQALKKKYQEQRLAKERIKHKFKASCVMRTRSCTERTMLKSTNQLAPRKFLPRIETKRLGLRSSVLADKMKKTSPKVKSVPPKPKKKVTIKQNNSDTSNSDSTSEYEEEGPSEKSVSQIKRTVQKNVQKNMCTRSKSETRRITRSHTGTISPKNLNKRPTRKTKEAAAVYMEILGRKLVSPDLENDDNGSMDSFPELPNARKSAQTENEAKVKVKQSASKPVTKTKDGKVTAIHSVAKKRLDKTTVSKIAFKSKRLIRVQKYCEIDSDEDSVSSSNDTSNNNNNNNNNTRPVTRRSLGKLNKPASRFLRSSTKNVVTRIEVQNNVNIKPKPQVQSNVRFNKEKFVIKRKREQNFSKSLPEKGSELKQKETKVQSNADGTADSDEETLGTVLNKIKRKKDDHPQTEEISSNNNNNNNCDVTDKVEQSLDENSIKVDLSKVSDDEESFRGFTKKTISKVLNSCQTHVNANLLVAEKTADTPKPTKIEDVKNSDPPNNKEENTELINNESFLHKTSVVANVPNNQCTQSERMQKAKLKSSNEIEFMKHIEKECHHKPEMSSGNDVDISLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSTFKYDICEKKADVSHLSISTKIQHLVRPVNVTLSKLAEKANAKDRMSIQSKFISTTIIDTKSSDIKQENESTTVNKSNIDLKDVNKGRNAKLCKDLCAGEESDGTLKSDQIVADGIGEKKLSSEKKTIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESDTEIPVNTPFRRKIRESTKSNVTTVLSENTEQKSEIDTNKSENNANKTVEKMITDNSEILESKETSNNILSQKECETIETKNTSNTTLNINKFELPKNFATLANIQVLPLDKLTTTWSNVNCSASIAVQVNLDDNAQTQEQTGEGDSNQHKSTEISTQTESNNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPVGTVQPTTRTPPNSTFVTTDHSTPSTSSSVTSVIPASSSEIQSTSPCKNENIIQTVNKQNTGILSSTGTEKLPKSPKTSRERKTSIDSNKNGKRCQIKSKQKSAEVYSPSNNVTFPSAKDLNSEACLVEAPTFHPSEKDFQDPLEYIDKIRPVAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERSKLFDEVESEWIKRESRALQRQNAPSTENEEDEEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNEAEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCHTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQLSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILPSVVKIREKEISSRKQLVSVGLLNTERLPLPDSGKRKKGKKVKEDDGDFECEVCRANLFVSLVSNSQDDSIYCLPHALQLFNKKKQTLKHCTLMYTYNEDELDELIHKLEERIEAKSKKTNQIKQTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01424161;
90% Identity
iTF_00961614; iTF_00962976;
80% Identity
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