Mrot005956.1
Basic Information
- Insect
- Megachile rotundata
- Gene Symbol
- dmrt1
- Assembly
- GCA_000220905.1
- Location
- NW:2294829-2296561[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-26 1.4e-22 78.5 11.2 1 47 20 66 20 66 0.99 2 2 1.6 5.2e+03 -3.4 0.2 3 10 106 113 105 118 0.67
Sequence Information
- Coding Sequence
- ATGAAGACCGAAAACGGCAACTCAAGCCAAATGACTTCGGGTATCGAGCAACGTCTGCGTAGTCCAAAGTGCGCGAGATGCAGGAACCACGGTGTGATTTCCGGTTTGAAGGGCCACAAGAGGTCCTGCGCATGGAAGGACTGCCGTTGTCCTTGTTGTTTGTTAGTGGTCGAAAGACAGCGGGTGATGGCTGCGCAAGTTGCCCTAAGAAGACAGCAACAGGCTCATGGTAATTACTTCGGTGATAATGTCTCGACTGTCTGTCACACGCCAATGGATACAACCAGTCCGCCGTACttgattaaaaatgatcaacCTGTGTGCAGAAGAACGAAGAACTTTCAACGTCATCAGTTACACTTCACGCAAACTAGCATCAGCGTAACGCAAGGTTTCTACGGATTAAAGACTATTCACGGCTTACCTACAGCATTTACCGCAGATCCTCCGTTACTGAATGGTTTATCACACAATCAGGAATATAATCAAGAACCTGAGAGTTCGAAGAAGATACAGCCCTTTCCTTCGATGTATTCCTCGATTCCGTGGTTTGAACATGTCGCAGAACCCCGTAAGgtgaaaaagaatttcaacaatttcgcTTCCACGGATCGCGATGATATTTCTACATCCAAGAATGGATCTTGCATGGAGAAGAAATCGACGATTTCTTTTAGCGTGGAATCTATCATTGGAACGAAATGA
- Protein Sequence
- MKTENGNSSQMTSGIEQRLRSPKCARCRNHGVISGLKGHKRSCAWKDCRCPCCLLVVERQRVMAAQVALRRQQQAHGNYFGDNVSTVCHTPMDTTSPPYLIKNDQPVCRRTKNFQRHQLHFTQTSISVTQGFYGLKTIHGLPTAFTADPPLLNGLSHNQEYNQEPESSKKIQPFPSMYSSIPWFEHVAEPRKVKKNFNNFASTDRDDISTSKNGSCMEKKSTISFSVESIIGTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00232623;
- 90% Identity
- iTF_00962533;
- 80% Identity
- -