Mrot006251.1
Basic Information
- Insect
- Megachile rotundata
- Gene Symbol
- bab2
- Assembly
- GCA_000220905.1
- Location
- NW:527344-552120[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.7e-13 7.7e-10 37.5 0.0 1 39 413 452 413 456 0.90 2 4 2.4e-12 2.4e-09 36.0 0.1 2 39 468 505 467 508 0.94 3 4 8.6e-19 8.6e-16 56.6 0.0 2 45 523 567 522 567 0.97 4 4 0.00053 0.53 9.2 0.0 1 18 574 596 574 598 0.79
Sequence Information
- Coding Sequence
- ATGGGGGATGGGATGAAAGGAAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAATTACCAATCAAACATGACGTCCGTTTTCCACCAACTCCTTCAGACGGAAGCGTTCGTCGATGTCACGCTAGCGTGCAACGAAGCTTCCTTAAAGGCACACAAGGTGGTATTGTCAGCGTGCAGTTCCTACTTTCAAAAGCTTCTGCTCTCGAATCCGTGCAAGCATCCGACGATCATCATGCCCCAGGACGTTTGTTTCAATGATCTGAAATTCATCATAGAATTCGTCTACAGGGGCGAAATCGACGTGTCGCAAGCGGAACTTCAGTCGTTGTTGAAAACGGCCGATCAGCTGAAGATCAAGGGACTCTGCGAGGTGCCGGAAAGCAGAGACGGTCCACCCTCGGTTAGTCTGAGTTCGCCACCGAGGGAACCCGGAACTCCTAGAATAAATTTCACCAAACTGAAGCGACATCATCCGAGATACAAGAGAGCCAGAACCAGCTTCGAGCCTCGAGCAACGGACTCGAGACACTACGACAGGTACAAAGAAGaggaatcgaacgaaaatTATAATCGAGAGAACAAAGAGAACCACAGAGATTGGCAAGCGGACGATGAAGAGTGCACGGAAGCAACCACCGCAGCAGTAGCCTTGGAAACTTGTCAgcgcaacaacaacaacaacaacatcAACATTGCTAACACCAGCAAcatcaacaacaacaataacaataacaacaacaacaacaacaataataacgGTAGCAATAGCAGCAACGGTAACGCCACCAACAATAACAACGGTGACATGTTCTGTCATACAGGACTCGGTCATTATGGTCACCATCCGGATCCTGGAGAGGTCGATCTGCCTCCAGAGACCCAACCTACGCCGCCTAGCGCCACCTTAGTCGGAACCACGATCACGCATCTCAGAGATCCGGATCATCATGCCACAGAGATCCAAAACTGTGACAGTGTAAAGATCAAGTTCGAAACGTTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCCGATCGGGCGAGCGTCAGTTCGAAGAACGCGACCGACAACGACAACATGATGATGATCACGCCGGAACTGCTCGGTTTAATGCCTTCCGGAAGCTCCGTTCACTCGGATTCCGGCGAAAATAACTCGAGGGGTCATTCCGGACAGTCTACCTCCCACCATCACGGTTCCAAGTCGTGGACTCAAGAGGACATGGACGCCGCTCTGGAAGCGCTGCGAAATCACGACATGAGTCTCACGAAGGCCTCCGCGACATTCGGTATACCTTCGACGACGTTGTGGCAAAGAGCGCATCGACTAGGTATAGACACGCCGAAAAAGGACGGGCCGACCAAGTCTTGGAGCGACGAGAGTTTGAATAACGCGCTCGAGGCTCTGCGAACCGGAACGATCTCGGCCAACAAAGCGTCGAAGGCGTTCGGGATACCTTCCAGCACCTTGTACAAAATCGCCAGAAGGGAAGGCATTCGGCTGGCTGCGCCTTTCAACGCGAGTCCCACCACTTGGTCACCCGCCGATCTCGATCGGGCGCTCGAGGCGATAAGATCCGGCCAAACGTCCGTGCAAAGGGCATCCACCGAATTCGGTATACCGACGGGAACCTTGTACGGCAGATGCAAGAGAGAGGGCATCGAACTCAGCAGGAGTAACCCTACACCCTGGAGCGAAGACGCTATGACCGAAGCTCTCGAGGCGGTCAGGACACATGAGCATCAATCAGGCGGCTATTCACTACAATCTACCGTATTCTTCTCTGTACGGCCGTTTCAAGAGAGGAAAGTACGAAGAACCAGCCGTCGGAGACTTGTCGCAAGACGGCAGCAATCCTCATTTCCATCAGAGTCCTACTCAGAATCATTCGTCCGCCGTACCGGATCAGATGCCGTACCAGGGCAGCTGAAACTTACCTCTCTACTAGAGCGATAA
- Protein Sequence
- MGDGMKGSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTSFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQADDEECTEATTAAVALETCQRNNNNNNINIANTSNINNNNNNNNNNNNNNNGSNSSNGNATNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHATEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNATDNDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSTSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRTHEHQSGGYSLQSTVFFSVRPFQERKVRRTSRRRLVARRQQSSFPSESYSESFVRRTGSDAVPGQLKLTSLLER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00391429;
- 80% Identity
- iTF_00963932;