Basic Information

Insect: Megachile ligniseca
Gene Symbol: salm
Assembly: GCA_945859565.1
Location: CAMAOB010000030.1:360400-369101[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.7e-06 0.00048 20.8 0.9 1 23 418 440 418 440 0.98

2 9 9.3e-06 0.00095 19.8 2.1 1 23 446 468 446 468 0.98

3 9 0.058 6 7.9 3.8 2 23 836 857 835 857 0.98

4 9 4e-08 4.1e-06 27.3 0.6 1 23 863 885 863 885 0.97

5 9 5.6e-05 0.0058 17.4 2.6 1 23 895 917 895 917 0.98

6 9 0.002 0.2 12.5 1.9 2 23 1219 1240 1218 1240 0.97

7 9 0.029 3 8.8 1.0 1 14 1246 1259 1246 1260 0.92

8 9 5.4e-07 5.6e-05 23.7 2.1 3 23 1441 1461 1439 1461 0.96

9 9 1.9e-07 1.9e-05 25.2 0.9 1 23 1467 1489 1467 1489 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.7e-06	0.00048	20.8	0.9	1	23	418	440	418	440	0.98
2	9	9.3e-06	0.00095	19.8	2.1	1	23	446	468	446	468	0.98
3	9	0.058	6	7.9	3.8	2	23	836	857	835	857	0.98
4	9	4e-08	4.1e-06	27.3	0.6	1	23	863	885	863	885	0.97
5	9	5.6e-05	0.0058	17.4	2.6	1	23	895	917	895	917	0.98
6	9	0.002	0.2	12.5	1.9	2	23	1219	1240	1218	1240	0.97
7	9	0.029	3	8.8	1.0	1	14	1246	1259	1246	1260	0.92
8	9	5.4e-07	5.6e-05	23.7	2.1	3	23	1441	1461	1439	1461	0.96
9	9	1.9e-07	1.9e-05	25.2	0.9	1	23	1467	1489	1467	1489	0.98

Sequence Information

Coding Sequence: ATGCCTGTTGTTGCATCGTTAACACCTATTAACTGCTTCGTATTCATAGAGCGTCTACGGTATCTGAAACGAGTAACGCTTCTTGTTCATTTTTGCGTTATTAATGCGATACATATAAATGGCCCGGACGTCGAATACAAACGAAACGGGCATGGCTTCTTCGCGTACGAGTTTTGTCTTCGCCGTACACCGCGTTCCTCGAACAGGCTTCTATTTCTCTCTGGAGAGGAAAATGACTTCACGTCGGATGGTGAAGAAAGCGCCGGCGGAGGAGGTGGAGGAGACGAGGCCGTGGACCTCACGGCATCCAGGTCTCACCAGGGTGACGAGGACGACAAGGATCAAGAGGATGCTCTGGAGGAGGATGAAGAGGAAGGTGTCGACGAGCAGGACGAGCAGGAGGACGATGAGGAAGGGTCGCGAAAGCAGATGCGCCATAGACAGGACGCGGAGAACAACAACAACTTCGTGGAGGGTGGTACGCCCGCTAGCCTGTTCCCACCTGCTGGAACTAGTCACGTCACCCTGGAAGCTCTCCAGAACACGAAAGTGGCGGTTGCTCAATTCGCAGCGACAGCTTTGGCCGGTGGAGCGGACAGCGAGGCGGCCTTGCAGGATTTGGCGCTGTTGCAGAGCACATTGTACACTCTTCAGCATCAGCAAGTGTTCCAATTGCAGTTGATCAGCCAGCTACAGCAGCAACTGTCCATTACACATAACCAGTCCGTGCAACAAGGAACGCCTGAGCCATCGGACAACAAGGAAATATCGCCGTCTCCTTTGATCCAGCCTAAACCTCTGTCAAGTTTGACATCGCCTCCTTCGTCGCGTCCACCGAGTCATCAACAGACTTCGCCAGCTCCTATGACGCCAAATCTCTCTCAGGAACGGCCAACACCGTCTAACAGCGCCTCTCCGTTGAATTTACCCTTGTCTTCGTCGAATACGACGGGCACAATCGCCACCACCAGTAGCAGTCAGGTGCCGATGGCCCATCAAATGCCACCGCTCTGCTCCATCAGCTCTTCCCTAGCCTCGTCGATAATAACGAATACCGATCCACCACCGCTACACGAACCAAACACGCTGGAGATGCTGCAGAAGAGAGCGCAAGAAGTACTGGACAACGCCAGCCAGGGTCTGCTGGCTAACAACCTGGCGGACGAACTTGCGTTCAGAGGGggcaaaggctcccgtctctccccgtacgattcaaagtccggtagcggtcgcggggagccgttcttcaagcaccgatgccgttattgcggcaaggtgttcggcagcgactcggcacttcagatccacatacgatcgcacacaggtgagcgaccctttaaatgcaacgtctgcggcagccgcttcaccacgaaagggaacctgaaggtccacttccagaggcatacggccaagTTTCCACATGTTAAGATGAACCCGAATCCCGTTCCGGAACACCTGGACAAGTACCACCCACCCTTGCTACAGCAAATAGCGTCTGGTCAAAGACCGATGCCGTCCCCGCCGCCGCCACCACCTTCTCACCATCCCTCTTTTCACCCGGCGGCGGCACACGGTTTTTTACCTCCTCAGCCGCCCCTGCCACTCAGTTTAGCCCTGCCCGGTATGCAACCTCTGTACAGATCACCGGTTGTCGCTCATCGAGACGATCAGGACGTGCCGGAGAACCTGAGTAAGCCTGTTACCACTGCCCCGACCACGTCCCCACATTCCCCCGCGGTTGTGTCGAACTCTCGTCATTCCTTTCACGACAATCACCACCACCAACAACAACAACAACAAAAGCAGCAGCTCGAGCAGAGAGACGAGATCAAACTCGAGCAGAGATCGCCTATGCAGGAGCAGTACCAGCACCAACAGCATCCTACCAGTCAGGAAGCCACAGAGAGGATAACACCGAAAAAGGAACCGGAAGAGGCCGAGGAGCCGACGGAAGAGGAAAGCGAAGATTTCGAGGAGACGACTAGACGGTATTTAAACTCACCCCAATCGTCCGTTAATCCACCCTCTCAACCGCAGACCTACGAAGACTGCAGTATGGACAGCAAAATTAGCGGCCGACTGGAAGGGGATGGCGATATGGAAGTTGACGAGGAGATCGAGGAACAGCCTGAAAACTTGTCCGGTCGGGGACCCATCAATCGGTTGCCTCAGCATATCGTTGCGTACCCTGGTGCTTCTCCTGCCAGCAGTAGTGCGAGCAGTGGAAGTCTTCAAACCTCCTTCGCGGGAATTCTGTTTCCAGGACCACCTGCCCATCATCAAATACCCCATCATCCTGCTTCGTCAACTGTAAACCCACCCGCAGTCTCGGCCAGTGACATGATCGACCCGGCTAAGGATCCAGCCATCTACTCCAGCCTATTACCACGGCCGGGCAGCAACGACAACTCCTGGGAGAGTTTGATCGAGATCACGAAGACCTCGGAGACGTCGAAGCTACAGCAGctggtcgacaacatcgaacacaaactgaccgatcccaaccagtgcgtgatctgccatagggtgctttcctgcaaaagcgcactgcagatgcactacagaacccataccggcgagcgtccgttcaagtgcaagatttgcggccgggcgttcaccaccaagggcaacttgaaaacccacatgggcgtgcacagggcgaaaccgccgctcagggtgctgcatcagtgtcccgtgtgtcacaagaaattcaccaatgcgctcgttctgcagcaacacatacgcttgcacaccggcgagccAACGGAGCTGAGCCCGGAACAAATTCAAGCCGGCGAGGTGAACGAATTCCCACCCGGTTATCCGCACCATCCTCTAGCGTCGTTCCTCCCGCAAGGCTTTCCACCGATTCATCCCGCAGGACCAGGCTTCCCGTTAGGCTTTCCTCCGAGCCGGCAGCAAACGATGGAACGACAGCCTCAGGATAACGACATAGACATTAAAGAAGAATCCCAGCAACAGCAGCAACAGCAACAGCAACAGAGGTACATCGAGGAGCAGAGCGAAGAGGTGGAGGACCAAGATGACGAGGAAGAGGATCGCAGGGACGACGACGAGAGGTGCAGCATGAATCGTGACAATCGTGGCGACGTAGAGGATGAGCAAGATCACGAGAGTGAGGAGAATGAGCACAAGGATCATACTTTGCCCAATTTCTCCACTTCCCTCGCCGCTCTCGAGAACCAGGTCCGAACAATCACGACCACGGCCACGTCGAACTTAGGAAACGCAGCCAGATCGCCACCTTTTCACCGGTACAACGGCAGCGAAAAGAGTAACAGCCCTCCGAATGCCGGTGCTCCTTTAGACTTGACACCACGAGCATCGTCGACACCAGCCTCCGTAGCATCGGTACCGACGCCGCCGCCGCAGCCCACGCACCACCCACATCCCTTCGGCATGTTCGCAGGCCTCCTGCAGGCAGTCTCTTCGTCACCGTCTACCAGCAGCATAGGAACCAGCAGCATAGGAACCACCGGCATAAATAGCGTCAGCTCCATGAACGCTGTTACTCCAGCATCGGGTGCCGCTGGACCATTGGCGTCCCTCACCACGTCAGCCGTGTTAGCTGCCACCTCGACCTACAACCCGCTCGGCCTGGCTGTCGGAGGGCCAGCAGtgcgtggaaacaccacgtgtaacatctgctacaagacatttgcgtgcaactccgcgctggagatccattaccggagccacacgaaggaacgacctttcaaatgcactatttgcgacagaggcttttccaccaagAACGATGGTTCCGGGCAGCAAGCATGCATCTGCGCGTCCCAACCGTTGCCCGCTAACAGTTCGATCACTTCACCCGATCCTCAGTGCGCCAGTAGTCGAGAAAAAGCGAAACGCAGGCGGCGGCGGCGACCTGAGGAGCGGAAGAGCCGGGGGCGGAAAGGAGCTGGAGGGGGGCGGGGGTTGACGCCTGTCTATCCTGCGATCCGCCTACCCCCGCTGATGTCACCCGCCCTCGGACTTCTACCCTCGGCGCACAGCCTCCTGGGCAACATGAAGCAACACATGCTGACACACAAGATCCGCGACATGCCGCCCCATCTGTTCAGCGACTCGAAGCAACAGCATCAGCAGCCCCAAGAGCACGAGAGTTCGAGAAGTCCCATGTGCACGGACGATTCGAGTCTACCTCCACCTCCTCCACCTCCGCCACCACCTCCACCAATGCCTCCGACCTCCATGGAGCAAGCCATTTCGGTGAAAAGATCCCCGTCCGAAGGGGACCTGCCAGCACCAAAGAGACCAGCCAgcgtgccgagcaagcacttgtgccagatatgcaataagaatttctcctcgtcttcggcgctccagatccatatgagaactcacacgggcgacaaaccgttccgatgcaccgtctgccagaaggccttcaccaccaagggcaatctcaagGTGCACATGGGCACTCATATGTGGACCAACGGAGCCTCTCGTCGAGGTCGTCGAATGTCGTTGGACCTACCACCCCTGCCTATCACCCCCAAGGATTCGGAGTTCCTCCAACGACGGCCGGATCTCTTCTACCCTTATCTACCCGCACCGTTCCTTAACGGCGTTCAACAGAAACTGAACGAGATCTCGGTGATACAAAGTAACAACGGATTACCTGGCCACTCGGTGGCCGCCGGAAAGTACGCAGGATTGTTCGGTTCGGTGTACGCGGCCGGTGCCGGATTCCCGTTGGACAAACAGCCAATGGCGGGGACCAACAACGGGCCCCTGATAGACGGGAAATCCTCGATCCCGTCCGGGTCGATGCTGTTCCAAACGCCGTCACCGTCCCATTCACCCGGCACACCATCGTCGAACGGCAGCAATCAAAACACCGGCGGCGTTCCTGCATGGACAGGTGATGCTCTTCAGCATCACTTCGACAGAGAGGCTCCTACGAGACCAGAGAGCAACTCCACACCACCCTCGGCTCGACTTCCGCCTCCGCCGGCGGCAAGGGGTGAAGGATTGGCCACGTGA
Protein Sequence: MPVVASLTPINCFVFIERLRYLKRVTLLVHFCVINAIHINGPDVEYKRNGHGFFAYEFCLRRTPRSSNRLLFLSGEENDFTSDGEESAGGGGGGDEAVDLTASRSHQGDEDDKDQEDALEEDEEEGVDEQDEQEDDEEGSRKQMRHRQDAENNNNFVEGGTPASLFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHNQSVQQGTPEPSDNKEISPSPLIQPKPLSSLTSPPSSRPPSHQQTSPAPMTPNLSQERPTPSNSASPLNLPLSSSNTTGTIATTSSSQVPMAHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSGSGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPSHHPSFHPAAAHGFLPPQPPLPLSLALPGMQPLYRSPVVAHRDDQDVPENLSKPVTTAPTTSPHSPAVVSNSRHSFHDNHHHQQQQQQKQQLEQRDEIKLEQRSPMQEQYQHQQHPTSQEATERITPKKEPEEAEEPTEEESEDFEETTRRYLNSPQSSVNPPSQPQTYEDCSMDSKISGRLEGDGDMEVDEEIEEQPENLSGRGPINRLPQHIVAYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPHHPASSTVNPPAVSASDMIDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTELSPEQIQAGEVNEFPPGYPHHPLASFLPQGFPPIHPAGPGFPLGFPPSRQQTMERQPQDNDIDIKEESQQQQQQQQQQRYIEEQSEEVEDQDDEEEDRRDDDERCSMNRDNRGDVEDEQDHESEENEHKDHTLPNFSTSLAALENQVRTITTTATSNLGNAARSPPFHRYNGSEKSNSPPNAGAPLDLTPRASSTPASVASVPTPPPQPTHHPHPFGMFAGLLQAVSSSPSTSSIGTSSIGTTGINSVSSMNAVTPASGAAGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNDGSGQQACICASQPLPANSSITSPDPQCASSREKAKRRRRRRPEERKSRGRKGAGGGRGLTPVYPAIRLPPLMSPALGLLPSAHSLLGNMKQHMLTHKIRDMPPHLFSDSKQQHQQPQEHESSRSPMCTDDSSLPPPPPPPPPPPPMPPTSMEQAISVKRSPSEGDLPAPKRPASVPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPGHSVAAGKYAGLFGSVYAAGAGFPLDKQPMAGTNNGPLIDGKSSIPSGSMLFQTPSPSHSPGTPSSNGSNQNTGGVPAWTGDALQHHFDREAPTRPESNSTPPSARLPPPPAARGEGLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118182;
90% Identity: iTF_00676196;
80% Identity: -