Basic Information

Insect: Megachile ligniseca
Gene Symbol: -
Assembly: GCA_945859565.1
Location: CAMAOB010000227.1:166827-171320[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.016 1.6 9.6 2.4 1 23 385 407 385 407 0.95

2 18 0.00079 0.081 13.8 0.9 2 23 448 469 447 469 0.98

3 18 0.0039 0.4 11.6 2.2 1 23 580 602 580 602 0.93

4 18 0.0046 0.48 11.3 0.4 2 23 606 627 605 627 0.96

5 18 0.026 2.7 9.0 6.2 1 23 697 719 697 720 0.95

6 18 0.00039 0.04 14.7 0.6 1 21 726 746 726 750 0.92

7 18 0.025 2.6 9.0 5.0 2 23 832 853 831 853 0.95

8 18 0.00023 0.024 15.4 4.2 1 23 907 929 907 929 0.96

9 18 0.00029 0.03 15.1 0.7 1 20 934 953 934 955 0.94

10 18 0.043 4.4 8.3 0.5 2 23 966 987 966 987 0.97

11 18 1.3e-05 0.0014 19.3 0.7 2 23 1026 1047 1025 1047 0.97

12 18 2.7e-05 0.0028 18.4 1.6 1 23 1052 1074 1052 1074 0.95

13 18 0.00015 0.015 16.0 2.9 1 23 1080 1102 1080 1102 0.98

14 18 4.7e-06 0.00049 20.7 0.4 1 23 1118 1140 1118 1140 0.95

15 18 3.9e-07 4e-05 24.2 0.6 1 23 1146 1168 1146 1168 0.99

16 18 4.2e-05 0.0043 17.8 0.2 1 23 1174 1196 1174 1196 0.97

17 18 0.00015 0.016 16.0 4.1 1 23 1202 1224 1202 1224 0.96

18 18 0.011 1.1 10.1 0.4 1 20 1230 1249 1230 1251 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.016	1.6	9.6	2.4	1	23	385	407	385	407	0.95
2	18	0.00079	0.081	13.8	0.9	2	23	448	469	447	469	0.98
3	18	0.0039	0.4	11.6	2.2	1	23	580	602	580	602	0.93
4	18	0.0046	0.48	11.3	0.4	2	23	606	627	605	627	0.96
5	18	0.026	2.7	9.0	6.2	1	23	697	719	697	720	0.95
6	18	0.00039	0.04	14.7	0.6	1	21	726	746	726	750	0.92
7	18	0.025	2.6	9.0	5.0	2	23	832	853	831	853	0.95
8	18	0.00023	0.024	15.4	4.2	1	23	907	929	907	929	0.96
9	18	0.00029	0.03	15.1	0.7	1	20	934	953	934	955	0.94
10	18	0.043	4.4	8.3	0.5	2	23	966	987	966	987	0.97
11	18	1.3e-05	0.0014	19.3	0.7	2	23	1026	1047	1025	1047	0.97
12	18	2.7e-05	0.0028	18.4	1.6	1	23	1052	1074	1052	1074	0.95
13	18	0.00015	0.015	16.0	2.9	1	23	1080	1102	1080	1102	0.98
14	18	4.7e-06	0.00049	20.7	0.4	1	23	1118	1140	1118	1140	0.95
15	18	3.9e-07	4e-05	24.2	0.6	1	23	1146	1168	1146	1168	0.99
16	18	4.2e-05	0.0043	17.8	0.2	1	23	1174	1196	1174	1196	0.97
17	18	0.00015	0.016	16.0	4.1	1	23	1202	1224	1202	1224	0.96
18	18	0.011	1.1	10.1	0.4	1	20	1230	1249	1230	1251	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAAATAAATACATCGGATTCACCGCAAAACGAAGAAGGCATCGTGTCGACGGTAGAAATATGCCGTGTTTGCCTTCTTGGTAATCTAGTGATGCGGGACTTGTTTCTGGAAAACGAGGTTGCTTCTCTTTCGGCGAAAGCGATGAGTTTCGCTAACGTTAAGATGTTACCTGGGGATGGTTTACCAGCCCGCGTATGCTGTGTGTGCGCGGACAAACTAGAATCTGCATACGAATTTAAGTTACAAGTGGAACAAGCCGATACCGTTCTCAGAGAAAGATTTGTCACTATGAATATAAAAGAAGAGTTGTTCTTCGATGAAGTCGAAGTACACTTGGATACCAGAGAACGAAACGAGGGTATAGAAGGAATGCGTATAGAGAATCATTATCGGGATACTACAGAAACTTTACCACCGATGTCTCAGGAAGAGAAATCGTCTCTACTGAAGGATCAGCTGGATCTGTTGCAAATGGAAAAACTAACCGAAAATGAACAGGGTATTAGAGAGCAGAACAATGGCCAAGTAATGGAAGAAGTGATCGATCAAGCGATTAGCGCGGAACAGATATCGGAGGATCGTCTAAATCATGAAGAAGAGACCGTTAAAACTGTCGCGGATAACTCGAAAGACGACGAATCGTTGAAACATGAAAACAGGGAGGACGACTGCATCGGAAGAATTGCGCCGATGGAACACGATTATATATTGCAACAGGAGTGTATATTGTCCGACGATGGTCAGCGAGAGCATCAAGAAGAAGAAGAAGAAGAAGAACAACCGCAAGAACAACAGCAGCAGCAGCAGCAGCAGCTTAACGATTCCGAAGAATCGTTTCCGCGAGAAGATTGCGCGGAATATGTAAATTTATTGGTAAAGGCGGCCGATGTAACGAATCAGGAAGACGAGGACGAGGACGAGGATGAACCAGGAGGTTCGGACGATATGAAACCGGATGTAAAAATGGAAGAAGGGACTTCGTGTCAGAACGAAGCTAGGAGAAGTAAACGTAAACTGGTTCGACGAAACCAAAGTATCGAAACGAAACGAGACTCCGACGAAGAAAATTATTTCGAAAATCTAAATTTAAGTTCGAGATTAAAAAATGTCGAAGATTCCGATAAATCCGATAAGATATTTTTCCTATGTTACCTGTGCGACAAAGAGTTTTTGTCGAAGAGCGTTTTGAAAGAGCATATGCACACTCACGAGGAAGTTAGAAAAGCATTGTCTCTAAAAAAGACGTTAGAGACGTTAGAAACGTTCGAAACGCCGCAAAAGAATGTCAGCAATCCCGTGAAATCGCCACCGTCGGGTAAAAGATCGAATAAATGCCCTTACTGTGGCAAACAGTACATCTATATAATTTCGTTTAGTAAACACTTGAAGAAACACGAACGAGAGAAGGAGGAGGGAAAGGAAGAACCGATGCCGTTAGAAATTTCGTTTCACGAGGACGAGCATAGTTTGGATCTTGACGATTACGAGGAGGCGCAGCGTTCGAATTCCGAGTTTCGAAGAAGAGCCAAAGGAAAAGACGGTTTCGACAGAACGAAGACGAAAAAACCGGTAGAAGAAGGCGAGTTCGAAGACGAGGACGAGGAACAAGGGCAGGAGGAGAACGAAGAGGAAGAAAGGGGAAAGGAAGAGGATAGGGGCGATCAAGGAGACCACGGTTGGAACGGAGAAGAGAAAGAAGGAAGTCAGGGTGTTCGCGCGGAAATGTTCGCTTGCGATAAATGCTCGCAGAAATTCTATACCAAGCGCGGTTTACGGAAACACTCGGTTTCGCACGTTGTTCTTAAATGCAGCGTTTGCGAAGAAGAATTCGATTCGATGGAAAAGCTTAGAAACCATCGTGCGAAGCACGTGGTCGAGGGCGTATTAAGCGAACAAGACTTCGAAGCGGATACGGAGTACACGATCGACGAAAGAACCGACGATCGCGGAACAGACGGGAAAGGAAACGATGGAAAGGTCCAAAATGGAGAGGATGGGGGCGAAGTGGAACGATTTGAAACGGATAATAGATCGGGGAAAAGCGACAGAAATACGGAGACGCACTCGGGGATCGAGTACAATTGCAAGACGTGTTGTCAACGGTTTCCAAGGAAAGATTCGTTGCTGAAGCACATGGAACAGCATCACGAACGCGCGAAAACTTACAAGTGTACACAATGCAATAAAACGTTCGGCAACGAACTTACTTTACGAAATCATCTTATAGCCACCGATCATAAAACTTTCGTTCACGGGCAAGAATACGATCCTAATAAACGCATTAAACGAGTCGCCGCGAGAGCGGCTCAGAAGATCATCGATCAGATTAAAACGGAGGACGGTTTAgaggattatgacgacgacgacgacgacgaggacgatcagagcaatgTCAGGCTCGATCGCGTCGGTTCAGGGTTAGACGGTCGCGGTAAACGAGAAACGTCCATGCAAAAGAAACACAATTACAAAAAGGAGCTGGAATGCGTGAGTTGCAATAAAAAATGCTGTTCGAAGCAGTCGTTGGCAAAACACATGGAACAACACGTGAAAGACGAACGAATCGTAAAATTGGAGAAGCAGAAACAACCGGCGGAGAAAAAGGGACAACGGAACTGTACCGGCGAACGCGTCGATAACGGGGAGAACAAAGATGACGATTACGACTCGGATTTCGAGAGTGGGTTAGACTGGCCGATGGACAATCACGAGTGTGCCAAGTGTAAAAAACGGTACAGTACGAAAAAATCATTGTTGCGACATCAGTTATTGCACGAGGAGCCGAACTTCGAATGCGACATCTGTAACGTGAAATTCTACCGTAAAGATAAATTGAAGGCTCATTACGACAAGTGTTCGGAAAAGAATCCCGATCAAGTGAGAAAGTGCAACATCTGCGGAGATAGTTTCGAAAACAACGAAATCCTACGAGAGCACAGATCGAAACACGTTACCGAGGGTATCCTTACGGAGGAAGATTTGAGGGATACAGAACCGCGGCCGGAAGAGAAAAAACCGGGCGAGAAAATCGGCCGAAAGAGAAGAACCGACATCGTCGGTTTGGAATGTACCGAATGCAACAAACGATACACCTCGAGGAAAGGACTATTGCGACATATTCAAGTTCACGAGGGGAAGAAATACCTGTGCGATATATGTCCGAAAAAGTTTTACAGGAGAGAACATTTGAAGATACACGTAGCTAAGCATAATATGATAAAACCGTACAAGTGTACTCGTTGCACCAAGCGTTTCATTAAAGAGGAGCAATTGACCAATCATTTGTCGAAGCATGATCGTACTTTCAAGAAGAATAAAGAAACGGATAGTTCAAAGAGATTCCTTTGCGAGATCTGTTCGAAAAGTTTCACCCAATCGACCACGTTAATCGCTCATCTTCGAGCGCACAACGGGATCAAACCGTACGTTTGCGAAGTTTGTTCGCGACCGTTTACAACGAACGCGTACCTAAAAATGCATATGAGAACGCATACGCAAGAACGACCGTACATTTGTCAGTACTGTTCACGAGCATTCGCCAGGGCCGATACGCTCGCTAATCATTTGACTTCGCACACGGGCGAAGCCAAGTATCATTGCAAATATTGTCCGAAAAATTTCCGTCGTCTGAAATCCCTGAAAGAGCACGTTTTCATTCACACCGGTCAGAGACCCTACGCTTGTCCAACCTGTGATCGACGGTTCAACAACAACGGAAGTCGTTACGCTCACAGTAAAAGGTGTAAACAAAATTTCGTTCAAAATCAGACTCAGAACCAGAATCAGAATCAGAATCGTGGTCAGATATTGGCCACGCAAGCGCAATCGATTCAAACTCAACAGAAAGTGTTACACCAGGCTACTCTTGGACAATGTCAAGTAGTGAAGGCACAGAATATCAAAACGATCACTATTACCAGACAATCTGAACCGGTTACTGCTCAACAGGTTATGCAACATCAGGAAATACTGATGCCTTTGATTCTTCCGCTTACCGTCACTCTCGCCGACGTTGGCGAAGAAGTTATATTACCAGAGGGAAGTAAAATATTTACTACCACTTAA
Protein Sequence: MDAVEINTSDSPQNEEGIVSTVEICRVCLLGNLVMRDLFLENEVASLSAKAMSFANVKMLPGDGLPARVCCVCADKLESAYEFKLQVEQADTVLRERFVTMNIKEELFFDEVEVHLDTRERNEGIEGMRIENHYRDTTETLPPMSQEEKSSLLKDQLDLLQMEKLTENEQGIREQNNGQVMEEVIDQAISAEQISEDRLNHEEETVKTVADNSKDDESLKHENREDDCIGRIAPMEHDYILQQECILSDDGQREHQEEEEEEEQPQEQQQQQQQQLNDSEESFPREDCAEYVNLLVKAADVTNQEDEDEDEDEPGGSDDMKPDVKMEEGTSCQNEARRSKRKLVRRNQSIETKRDSDEENYFENLNLSSRLKNVEDSDKSDKIFFLCYLCDKEFLSKSVLKEHMHTHEEVRKALSLKKTLETLETFETPQKNVSNPVKSPPSGKRSNKCPYCGKQYIYIISFSKHLKKHEREKEEGKEEPMPLEISFHEDEHSLDLDDYEEAQRSNSEFRRRAKGKDGFDRTKTKKPVEEGEFEDEDEEQGQEENEEEERGKEEDRGDQGDHGWNGEEKEGSQGVRAEMFACDKCSQKFYTKRGLRKHSVSHVVLKCSVCEEEFDSMEKLRNHRAKHVVEGVLSEQDFEADTEYTIDERTDDRGTDGKGNDGKVQNGEDGGEVERFETDNRSGKSDRNTETHSGIEYNCKTCCQRFPRKDSLLKHMEQHHERAKTYKCTQCNKTFGNELTLRNHLIATDHKTFVHGQEYDPNKRIKRVAARAAQKIIDQIKTEDGLEDYDDDDDDEDDQSNVRLDRVGSGLDGRGKRETSMQKKHNYKKELECVSCNKKCCSKQSLAKHMEQHVKDERIVKLEKQKQPAEKKGQRNCTGERVDNGENKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDTEPRPEEKKPGEKIGRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFVQNQTQNQNQNQNRGQILATQAQSIQTQQKVLHQATLGQCQVVKAQNIKTITITRQSEPVTAQQVMQHQEILMPLILPLTVTLADVGEEVILPEGSKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01122592;
90% Identity: iTF_00963981;
80% Identity: -