Basic Information

Insect: Megachile lagopoda
Gene Symbol: salm
Assembly: GCA_036983795.1
Location: CM072793.1:1903005-1911441[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.7e-06 0.00055 20.8 0.9 1 23 348 370 348 370 0.98

2 9 9.3e-06 0.0011 19.9 2.1 1 23 376 398 376 398 0.98

3 9 0.059 6.8 7.9 3.8 2 23 767 788 766 788 0.98

4 9 4.1e-08 4.7e-06 27.3 0.6 1 23 794 816 794 816 0.97

5 9 5.7e-05 0.0066 17.4 2.6 1 23 826 848 826 848 0.98

6 9 0.002 0.23 12.6 1.9 2 23 1150 1171 1149 1171 0.97

7 9 0.029 3.4 8.9 1.0 1 14 1177 1190 1177 1191 0.92

8 9 5.5e-07 6.3e-05 23.8 2.1 3 23 1373 1393 1371 1393 0.96

9 9 1.9e-07 2.2e-05 25.2 0.9 1 23 1399 1421 1399 1421 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.7e-06	0.00055	20.8	0.9	1	23	348	370	348	370	0.98
2	9	9.3e-06	0.0011	19.9	2.1	1	23	376	398	376	398	0.98
3	9	0.059	6.8	7.9	3.8	2	23	767	788	766	788	0.98
4	9	4.1e-08	4.7e-06	27.3	0.6	1	23	794	816	794	816	0.97
5	9	5.7e-05	0.0066	17.4	2.6	1	23	826	848	826	848	0.98
6	9	0.002	0.23	12.6	1.9	2	23	1150	1171	1149	1171	0.97
7	9	0.029	3.4	8.9	1.0	1	14	1177	1190	1177	1191	0.92
8	9	5.5e-07	6.3e-05	23.8	2.1	3	23	1373	1393	1371	1393	0.96
9	9	1.9e-07	2.2e-05	25.2	0.9	1	23	1399	1421	1399	1421	0.98

Sequence Information

Coding Sequence: ATGTTTCGTCACAGAGAGGAAAATGACTTCACGTCGGATGGTGAAGAAAGCGCCGGCGGAGGGGGTGGAGGAGACGAAGCCGTGGACCTCACGGCATCCAGGTCTCACCAGGGTGACGAGGACGACAAAGATCAAGAGGATGCTCTGGAGGAGGATGAAGAGGAAGGTGTGGACGAGCAGGACGAGCAGGAGGACGATGAGGAAGGGTCGCGAAAACAGATGCGCCATAGACAGGACGCGGAGAACAACAACAACTTCGTGGAGGGTGGTACGCCCGCTAGCCTATTCCCACCTGCTGGAACTAGTCACGTTACCCTGGAAGCTCTCCAGAACACGAAAGTGGCGGTTGCTCAATTCGCAGCGACAGCTCTGGCCGGTGGAGCAGACAGCGAGGCGGCCTTGCAGGATTTGGCGCTGTTGCAGAGCACATTGTACACTCTTCAGCATCAGCAAGTGTTCCAATTGCAGTTGATCAGCCAGCTACAGCAGCAACTGTCCATTACACATAGCCAGTCCGTGCAACAAGGAACGCCTGAGCCATCGGACAACAAGGAAATATCGCCGTCTCCTTTGATCCAGCCTAAACCTCTGTCAAGTTTGACGTCACCTCCTTCGTCGCGTCCACCGAGTCATCAACAGACTTCGCCAGCTCCTATGACGCCAAATCTCTCTCAGGAACGGCCAACACCGTCTAACAGCGCCTCTCCGTTGAATTTACCCTTGTCTTCGTCGAATACGACGGGCACAATCGCCACCACCAGTAGCAGTCAGGTGCCGATAGCCCATCAAATGCCACCGCTCTGCTCCATCAGCTCTTCCCTAGCCTCGTCGATAATAACTAATACCGATCCACCACCGCTACACGAACCAAACACGCTGGAGATGCTGCAGAAGAGAGCGCAAGAAGTACTGGACAACGCCAGCCAGGGTCTGCTGGCTAACAACCTGGCGGACGAACTTGCGTTCAGAGGGGGCAAAGGCTCCCGTCTCTCCCCGTACGATTCAAAGTCCGGTAGCGGTCGCGGGGAGCCGTTCTTCAAGCACCGATGCCGTTATTGCGGCAAGGTGTTCGGCAGCGACTCGGCACTTCAGATCCACATACGATCGCACACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGCAGCCGCTTCACCACGAAAGGGAACCTGAAGGTCCACTTCCAGAGGCATACGGCCAAGTTTCCACATGTTAAGATGAACCCGAATCCCGTTCCGGAACACCTGGACAAGTACCACCCACCCTTGCTACAGCAAATCGCGTCTGGTCAAAGACCGATGCCGTCCCCGCCGCCGCCACCACCTTCTCACCATCCCTCTTTTCACCCGGCGGCGGCACACGGTTTTTTACCTCCTCAGCCGCCCCTGCCACTCAGTTTAGCCCTGCCCGGTATGCAACCTCTGTACAGATCACCGGTTGTCGCTCATCGGGACGATCAGGACGTGCCGGAGAACCTGAGTAAGCCTGTTACCACTGCCCCGACCACGTCCCCACATTCCCCCGCGGTTGTGTCGAACTCTCGTCATTCCTTTCACGACAATCACCACcaccaacaacaacaacaacaacaaaagcAGCAGCTCGAGCAGAGAGACGAGATCAAACTCGAGCAGAGATCGCCTATGCAGGAGCAGTACCAGCACCAACAGCATCCTACCAGTCAGGAAGCCACAGAGAGGATAACGCCGAAAAAGGAACCGGAAGAGGCCGAGGAGCCGACGGAAGAGGAAAGCGAAGATTTCGAGGAGACGACTAGACGGTATTTAAACTCACCCCAATCGTCCGTTAATCCACCCTCTCAGCCGCAGACCTACGAAGACTGCAGTATGGACAGCAAAATTAGCGGCCGACTGGAAGGGGATGGCGACATGGAAGTTGACGAGGAGATCGAGGAACAGCCTGAAAACTTGTCTGGTCGGGGACCCATCAATCGGTTGCCTCAGCATATCGTTGCGTACCCTGGTGCTTCTCCTGCCAGCAGTAGTGCGAGCAGTGGAAGTCTTCAAACCTCCTTCGCGGGAATTCTGTTTCCAGGACCACCTGCCCATCATCAAATACCCCATCATCCTGCTTCGTCAACTGTAAACCCACCCGGAGTCTCGGCCAGTGACATGATCGACCCGGCTAAGGATCCAGCCATCTACTCCAGCCTATTACCACGGCCGGGCAGCAACGACAACTCCTGGGAGAGTTTGATCGAGATCACGAAGACCTCGGAGACGTCGAAGCTCCAGCAGCTGGTCGACAACATCGAACACAAACTGACCGATCCCAACCAGTGCGTGATCTGCCATAGGGTGCTCTCCTGCAAAAGCGCACTGCAGATGCACTACAGAACCCATACCGGCGAGCGTCCGTTCAAGTGCAAGATTTGCGGCCGGGCGTTCACCACCAAGGGCAACTTGAAAACCCACATGGGCGTGCACAGGGCGAAACCGCCGCTCAGGGTGCTGCATCAGTGTCCCGTGTGTCACAAGAAATTCACGAATGCGCTCGTTCTGCAGCAACACATACGCTTGCACACCGGCGAGCCAACGGAGCTGAGCCCGGAACAAATTCAAGCCGGCGAGGTGAACGAATTCCCACCCGGTTATCCGCACCATCCTCTAGCGTCGTTCCTCCCGCAAGGCTTTCCACCGATTCATCCCGCAGGACCAGGCTTCCCGTTAGGCTTTCCTCCGAGCCGGCAACAAACGATGGAACGACAGCCTCAGGATAACGACATAGACATTAAAGAAGAATCccagcaacaacagcagcagcaacagcaacagagGTACATCGAGGAGCAGAGCGAAGAGGTGGAGGACCAAGATGACGAGGAAGAGGATCGCAGGGACGACGACGAGAGGTGCAGCATGAATCGTGACAATCGTGGTGACGTAGAGGATGAGCAAGATCACGAGAGTGAGGAGAATGAGCACAAGGATCCATCTTTGCCCAATTTCTCCACTTCCCTCGCCGCTCTCGAGAACCAGGTCCGAACAATCACGACCACGGCCACGTCGAACTTAGGAAACGCAGCCAGATCGCCACCTTTTCACCGGTACAACGGCAGCGAAAAGAGTAACAGCCCTCCGAATGCCGGTGCTCCTTTAGACTTGACACCACGAGCATCGTCGACACCAGCCTCAGTAGCATCGGTACCAACGCCGCCGCCGCAGCCCACGCACCACCCACATCCCTTCGGCATGTTCGCAGGCCTCCTGCAGGCAGTCTCTTCGTCACCGTCTACCAGCAGCATAGGAACCAGCAGCATAGGAACCAGCAGCATAAATAGCGTCAACTCCATGAACGCTGTTACTCCAGCATCGGGTGCCGCTGGACCATTGGCGTCCCTCACCACGTCAGCCGTGTTAGCTGCCACCTCGACCTACAACCCGCTCGGCCTGGCTGTCGGAGGGCCAGCAGTGCGTGGAAACACCACGTGTAACATCTGCTACAAGACATTTGCGTGCAACTCCGCGCTGGAGATCCATTACCGGAGCCACACGAAGGAGCGACCTTTCAAATGCACTATTTGCGACAGAGGCTTTTCCACCAAGAACGATGGTTCCGGGCAGCAAGCATGCATCTGCGCGTCCCAACCGTTGCCCGCTAACAGTTCGATCACTTCACCCGATCCTCAGTGCGCCAGTAGTCGAGAAAAAGCGAAACGCAGGCGGCGGCGGCGACCTGAGGAGCGGAAGAGCCGGGGGCGGAAAGGAGCTGGAGGGGGGCGGGGGTTGACGCCTGTCTATCCTGCGATCCGCCTACCCCCGCTGATGTCACCCGCCCTCGGACTTCTACCCTCGGCGCACAGCCTCCTGGGCAACATGAAGCAGCACATGCTGACGCACAAGATCCGCGACATGCCGCCCCATCTGTTCAGCGACTCGAAGCAACAGCATCAGCAGCAGCCCCAAGAGCACGAGAGTTCGAGAAGTCCCATGTGCACGGACGATTCGAGTCTACCTCCACCTCCCCCACCTCCGCCACCACCTCCACCAATGCCTCCGACCTCCATGGAGCAAGCCATTTCGGTGAAAAGATCCCCGTCCGAAGGGGACCTGCCAGCACCAAAGAGACCAGCCAGCGTGCCGAGCAAGCACTTGTGCCAGATATGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCAGATCCATATGAGAACTCACACGGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTCAAGGTGCACATGGGCACTCATATGTGGACCAACGGAGCCTCTCGTCGAGGTCGTCGAATGTCGTTGGACCTACCTCCTCTGCCTATCACCCCCAAGGATTCGGAGTTCCTCCAACGACGGCCGGATCTCTTCTACCCTTATCTACCCGCACCGTTCCTTAACGGCGTTCAACAGAAACTGAACGAGATCTCGGTGATACAAAGTAACAACGGATTACCTGGCCACTCGGTGGCCGCCGGGAAGTACGCAGGATTGTTCGGTTCGGTGTACGCGGCCGGTGCCGGATTCCCGTTGGACAAACAGCCAATGGCGGGGACCAACAACGGGCCCCTGGTAGACGGGAAATCCTCGATCCCGTCCGGGTCGATGCTGTTCCAAACGCCGTCACCGTCCCATTCACCCGGCACACCATCGTCGAACGGCAGCAATCAAAACACCGGCGGCGTTCCTGCATGGACAGGTGATGCTCTTCAGCATCACTTCGACAGAGAGGCTCCTACGAGACCAGAGAGCAACTCCACACCACCCTCGGCTCGACTTCCGCCTCCGCCGGCGGCAAGGGGTGAAGGATTGGCCACGTGA
Protein Sequence: MFRHREENDFTSDGEESAGGGGGGDEAVDLTASRSHQGDEDDKDQEDALEEDEEEGVDEQDEQEDDEEGSRKQMRHRQDAENNNNFVEGGTPASLFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHSQSVQQGTPEPSDNKEISPSPLIQPKPLSSLTSPPSSRPPSHQQTSPAPMTPNLSQERPTPSNSASPLNLPLSSSNTTGTIATTSSSQVPIAHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSGSGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPSHHPSFHPAAAHGFLPPQPPLPLSLALPGMQPLYRSPVVAHRDDQDVPENLSKPVTTAPTTSPHSPAVVSNSRHSFHDNHHHQQQQQQQKQQLEQRDEIKLEQRSPMQEQYQHQQHPTSQEATERITPKKEPEEAEEPTEEESEDFEETTRRYLNSPQSSVNPPSQPQTYEDCSMDSKISGRLEGDGDMEVDEEIEEQPENLSGRGPINRLPQHIVAYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPHHPASSTVNPPGVSASDMIDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTELSPEQIQAGEVNEFPPGYPHHPLASFLPQGFPPIHPAGPGFPLGFPPSRQQTMERQPQDNDIDIKEESQQQQQQQQQQRYIEEQSEEVEDQDDEEEDRRDDDERCSMNRDNRGDVEDEQDHESEENEHKDPSLPNFSTSLAALENQVRTITTTATSNLGNAARSPPFHRYNGSEKSNSPPNAGAPLDLTPRASSTPASVASVPTPPPQPTHHPHPFGMFAGLLQAVSSSPSTSSIGTSSIGTSSINSVNSMNAVTPASGAAGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNDGSGQQACICASQPLPANSSITSPDPQCASSREKAKRRRRRRPEERKSRGRKGAGGGRGLTPVYPAIRLPPLMSPALGLLPSAHSLLGNMKQHMLTHKIRDMPPHLFSDSKQQHQQQPQEHESSRSPMCTDDSSLPPPPPPPPPPPPMPPTSMEQAISVKRSPSEGDLPAPKRPASVPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPGHSVAAGKYAGLFGSVYAAGAGFPLDKQPMAGTNNGPLVDGKSSIPSGSMLFQTPSPSHSPGTPSSNGSNQNTGGVPAWTGDALQHHFDREAPTRPESNSTPPSARLPPPPAARGEGLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118182;
90% Identity: iTF_00676196;
80% Identity: -