Mfla022602.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- zfy1
- Assembly
- GCA_949319885.1
- Location
- OX439433.1:2044702-2063242[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.2 4.6e+02 2.5 0.3 2 23 6 27 5 27 0.95 2 13 0.93 82 4.9 0.1 1 23 1008 1031 1008 1031 0.92 3 13 1.9e-05 0.0016 19.7 2.3 2 23 1142 1163 1141 1163 0.96 4 13 6.3e-05 0.0055 18.0 2.8 1 23 1169 1191 1169 1191 0.98 5 13 0.00022 0.02 16.3 2.6 2 23 1198 1219 1197 1220 0.95 6 13 0.7 62 5.2 2.2 5 23 1233 1251 1231 1251 0.97 7 13 0.029 2.6 9.6 1.2 3 23 1258 1279 1257 1279 0.96 8 13 0.0061 0.54 11.7 0.1 2 23 1297 1317 1296 1317 0.97 9 13 0.0001 0.0089 17.3 0.4 1 20 1323 1342 1323 1345 0.91 10 13 0.00029 0.026 15.9 0.4 1 23 1353 1375 1353 1375 0.99 11 13 0.0064 0.57 11.7 7.2 1 23 1381 1403 1381 1403 0.98 12 13 7.5e-06 0.00066 20.9 1.3 1 23 1409 1433 1409 1433 0.98 13 13 0.00079 0.07 14.5 4.6 1 23 1439 1461 1439 1462 0.95
Sequence Information
- Coding Sequence
- ATGGATCAGCTAGTGCAATGCCCCGTCTGCACGCTATATCTGCATAATGGCATGACTCTGGAGTCACATTTAGACACCCATCCCAAAGATCAGGTTATAAAAGCTTTATGCAGTCTAACAACTAAAACAGGAAGTGGCAGTAGTTATGGCAGCAGAACATCTACACCATTGCATTCAGAGCGCTCATACCGGAGCCGGTCTAGGACTCCAGCTCCAGATGAGAGGTGGCCCAATTCACATCGGAGTAGTGATAATGAACGTTACTGGCGCAGGACACCTAGTAGAACATCTAAGTCAAGTCAATTGCTGTCCAATTCTCGCCATGGGACCCCTGATATTAGGATTAGTGACATAAATTTTGAGAACAACTTAAATGGTGCAAGCCAGTTTCCTGTTTCCTCATATCCTATAAAGACGGATAAAATTCAACAAACATATGCAAATGCTGCCATGGTGTCTGACTTTGAGCAACCCTATGTGTATTATCAAGATCCCAATACAGAGGACAGAGAGATCAAGTACTCACGGACTGCAGAATACAACCCTTTGGACAGCAACACTAGCACATTTACACATAAACCAAGGTCACTGACCCCTGGTGTTAAACTACAGCCTGCTTTGCTACCTGCAATCCCTGGGAGAGTGAATGAAAATCTTGTGAAAGTGTTACCTAAACCAAATAATATACTTGTAAAGACTAATATGGGTGGTGTGCAGTATATAGCACCTGGTGTTAAACCCATGCATGTAATGGTGCCTAATCCTGCAGCATTTGTCCagaaaaatgtacaaaacaGTATGATTATGGCCACTGGAATCCCCGGAACAACAATGGTTGAGACCAAAAGTATGGCACCATCGTTACCAACAAACCAGTTCAACCAGCTGACAAGCAGTACCTTTACACCTGGCACTACTGTAGTACAAAACTCACAATTTATATATAGGGAAATGGTACATAATATTGATGGTAAGCGTTTTCTTTCTTGTGTGCCTTCAGTTCTTAGTCATGAGAATGTTACTAATGTAGCACAAGGAACCTCAATGTATCAGAATTTGATGGTTGTAGATCAACTTGGCAGTGCACCATGTATGTATACAACACCTCAGTCTATGATACCAAAGCCTTGTCCAGCCTCTGTATATGCTGAAAGCTTGTCTCATTTGCCTAGTAGCACTACAGCTCACATAGAGAAGGGTGGATCTGCTTCAAATGATGCTAATAAGACTCTTATAATAGAAGTAGGGCCGATTGTACCTCCAACATCGCAATGTGAAGTAGCAACAACCACACACCATAACATTACCACTCAAACTGATATAGAGGTTACTAAGCCTAACAAAGTTAAAGTACTGCCATTAGATAAATTTGAGAAGAGTGAGACTCCAGGTTCTAGTAAGGGCTTGAAAATCCTTAGCAATATCAAAGTAGAAGTCCCTGTgcaacatcataaaaatatgcTAAATACTGTGATGGATTTGACTGGGTCGAATGAATCTGAATACCCCGTCAGATCTGTGTCACCCGAGAAGATCCTGCCTGATTTAGATGACAATAATCCAATGTCTGATGATTGCACACAGCCATCAATATCTAGTAGTGATAGTGTAGTGTCACATTCATTTTCTGTGATAAAAAATGTTGGAAATCCACCATCTTACAAAGAATCATCTAAGTCCAGTGTGGACAATAAAATAGATGCAGAATTTTCAGATAGCTGTCCAGTACTTGATTTAATATGCAATGAGAAGCCATCAATATCTCCATGTAGTGAATTGTCAGAAAGTGGAGAGAATTCAACAGATCACACATCAGCATCTCCTAAACCTCAGATGGTTCAAACTACTAGCAAAGAAAGTAATTTGGATAAGAAAAATGTACAGCAAAAACCCTTCAGACAAAACACACTGatgttgaataatatttatgtaaagaaacataaaaaaatattacaaataaagaaTGCTAAACCATTTCAATCAAGTACAGGGTCAAGTCACATCGACATTGAGCCTCAGCCATCGTCATCTACTAATAGGCCACCTGAAAATTACATGATGAATAAACTGAGTGAGAAAAAGGATAGAGACAAAGCTAGCACTCTGCAGCCATTGTCAGTGGAAAAAATATGTATTGACGATGACACGGATAATAATGATTTTGATGCCGACACAGAGGAACAGTCAATGGACATTGAGCCTGTGGCGCCGTCAAGTCTCAAGAATTCGAAGTTCACAACCAGCATAGATGTAGTTCAAGTAAAAGAGGAAGTCAACACAAGCAATGAAGACGGCTATAGCACTGAGAATAGCAATAAAGAGTTGGTGCCTTTAGAATCTTTACGACCGATTAATGTAATAACGTATGGGAATATGCCACCGGGGGATTTCGACGAGGAGTCGAATCACAGAGAGCTGCTAGAACTAGAAGCATCAAAAAACAACAAGTTTGTGAGTATGATGAATGAGAATTATTTTGGCGATAACATCTACGCGGATTATTTTACTCCAGATAGGGTGGAGTCGTTCGATTCGGAGCGGGCGTCGTCGTTTGTGAAAGAAGGTTCGAAggatatgtataatatgtgggGTGCTGGGGAACCATCTCACAAGGAGAGTGAGTTTGTGCTGCCAAACTTTATACACGAGAGTTATAAGATAGCAGATAGCAGTGGTGTGGATTATGCTGATATTGGAGGGAGAGAGGAGAACGTAGAAGTGGAGGTGGAGgggtgcgagcgagacagcaaGGCGGACGTGCTCAGCGAGAGCCGCAGCGAAGGCGAGGTGCCGCTGAACATCTGCGCCGACGAGCGCATGCCGCCGCGCGGGGAGCTCAGTGGACAGGAGAGCAACGGTGATATGGAATCATCTTGGAATGGGATGTACACGGACGTTCCGCCGGCGGAGCCCTACGACCTGATCGCGCGCGAGAGCTGGGTCTCCGATGGGTCAGAGATGGACGCTAGTGAAAAGAGGGATAATTTAGAGGAAGAGCTGCAGTTCCCCTTGGGCCGCGTGCACGTGTGCGCGTCGTGCGGCGGCAAGTTCCCCGCGCTGCGCGACCTGCGCGCGCACAGGGCGCAGGCGCACCCGCCCGCGCACTCCCCGCACGCCCCACACGTCCCACACGTCGCCGCCGAGCGCACGTCCTATAGCAGGCTGTTGACTGCTAAGATCATCAAGAAGGAGGAGAAGGCGGATATCACTGAGACCTCGATAGGAGCGATAGATTCAAAGGAATCGATCGCGACGTCAATCCTGCAGGAGTACGACGTGCTGAACGAGGCCAAGCCGAAGATCGAGGGGCTGATCAAGCAGGAGGCGAAGCCGAGGCGGAAGCGAGACTTCGTTTGCCCTACTTGCAAAGTCGACCAGTTGACTGACGTGGCGTTCCACGCGCATCTCAAGATCCATCCGTTGGAATGTCTCCGGTGCGGAAAGTGCTTCTCGCGGCGAGCGAACCTCGCCTTGCACACAAAAACGCACTTAGGCATCAAGAATTATAAATGCGAGGTGTGCGAGAAGCGGTTCGTGACGAAGCAGAAGCTGCAGGAGCACCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACCGTCTGCGACACCACCTTCCGCCGCTACTCCAACATGCTCGCGCACCGGGACCGGCACCACTTCCAGAAAAAGGCGAAGGTTCGCGACTTCGTGTGCCACTGCGGGGCCGTGTTCCAGTCGCGCGCCAAGCTGCACTGGCACAAGGAGACGCACGACGAGAAGCCTAAGGCGTGCCTGTACTGCAGCGACAAGTTCATCCACGCAGCTTCGCTGACCCGACACGTGCGGCGTACTCACAACATGTACTACGTGCCTGACGCCGACCGAGCCAAGCCGAAGGAGAACGTGCCCTGCCCTGTTTGCAAACAGATGTACCTGCGCAGCAACCTGCGCGCGCACCTGCTGACGCACTCGGGCAAGCGGCCGTACGCGTGCGTCATCTGCAACAAGGCTTTCACCACCAAGTGGAACCTTAAGTTGCACCGCTGGACGCACATGAGCCGCTCCGCCAAGCCGTTCAAGTGCAACCTGTGCAAAGGCGCGTTCGTCCGTCAAGCGGAGTACATATCCCACATGAACTCGCACAAGTCCGTTCGCCCCTACACCTGCAACTACTGCGGGTGCCAGTTCATAAGGAAGTACAACTGCCAACGGCACGTAAGGGAACACCAGATGGCGAAGAAATACGTTTGTAAAGTGCCCGAGTGCGGTAAGTCGTTTCATAGAAGCTACTACCTCTCGGAACATATGAAGGTGCACAGTGGGGCTCGTCCGTTCGCGTGTAATATATGTGGGAAGACTTCGAGTAACAAGTCGAATCATAATAAGCATTTGAAGATACATCACGCGCGGGAGCCGGTCGCTACGGAGGCGTAG
- Protein Sequence
- MDQLVQCPVCTLYLHNGMTLESHLDTHPKDQVIKALCSLTTKTGSGSSYGSRTSTPLHSERSYRSRSRTPAPDERWPNSHRSSDNERYWRRTPSRTSKSSQLLSNSRHGTPDIRISDINFENNLNGASQFPVSSYPIKTDKIQQTYANAAMVSDFEQPYVYYQDPNTEDREIKYSRTAEYNPLDSNTSTFTHKPRSLTPGVKLQPALLPAIPGRVNENLVKVLPKPNNILVKTNMGGVQYIAPGVKPMHVMVPNPAAFVQKNVQNSMIMATGIPGTTMVETKSMAPSLPTNQFNQLTSSTFTPGTTVVQNSQFIYREMVHNIDGKRFLSCVPSVLSHENVTNVAQGTSMYQNLMVVDQLGSAPCMYTTPQSMIPKPCPASVYAESLSHLPSSTTAHIEKGGSASNDANKTLIIEVGPIVPPTSQCEVATTTHHNITTQTDIEVTKPNKVKVLPLDKFEKSETPGSSKGLKILSNIKVEVPVQHHKNMLNTVMDLTGSNESEYPVRSVSPEKILPDLDDNNPMSDDCTQPSISSSDSVVSHSFSVIKNVGNPPSYKESSKSSVDNKIDAEFSDSCPVLDLICNEKPSISPCSELSESGENSTDHTSASPKPQMVQTTSKESNLDKKNVQQKPFRQNTLMLNNIYVKKHKKILQIKNAKPFQSSTGSSHIDIEPQPSSSTNRPPENYMMNKLSEKKDRDKASTLQPLSVEKICIDDDTDNNDFDADTEEQSMDIEPVAPSSLKNSKFTTSIDVVQVKEEVNTSNEDGYSTENSNKELVPLESLRPINVITYGNMPPGDFDEESNHRELLELEASKNNKFVSMMNENYFGDNIYADYFTPDRVESFDSERASSFVKEGSKDMYNMWGAGEPSHKESEFVLPNFIHESYKIADSSGVDYADIGGREENVEVEVEGCERDSKADVLSESRSEGEVPLNICADERMPPRGELSGQESNGDMESSWNGMYTDVPPAEPYDLIARESWVSDGSEMDASEKRDNLEEELQFPLGRVHVCASCGGKFPALRDLRAHRAQAHPPAHSPHAPHVPHVAAERTSYSRLLTAKIIKKEEKADITETSIGAIDSKESIATSILQEYDVLNEAKPKIEGLIKQEAKPRRKRDFVCPTCKVDQLTDVAFHAHLKIHPLECLRCGKCFSRRANLALHTKTHLGIKNYKCEVCEKRFVTKQKLQEHHNVHTGRAPVKCTVCDTTFRRYSNMLAHRDRHHFQKKAKVRDFVCHCGAVFQSRAKLHWHKETHDEKPKACLYCSDKFIHAASLTRHVRRTHNMYYVPDADRAKPKENVPCPVCKQMYLRSNLRAHLLTHSGKRPYACVICNKAFTTKWNLKLHRWTHMSRSAKPFKCNLCKGAFVRQAEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHQMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHLKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752353;
- 90% Identity
- -
- 80% Identity
- -