Gpyl012809.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- zfy1
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000012.1:2403806-2420278[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3.5 3.4e+02 3.0 0.3 2 23 6 27 5 27 0.95 2 12 1.1e-05 0.001 20.3 2.5 2 23 1157 1178 1156 1178 0.97 3 12 5.9e-05 0.0057 18.0 2.8 1 23 1184 1206 1184 1206 0.98 4 12 0.0027 0.26 12.7 2.1 2 23 1213 1234 1212 1235 0.95 5 12 0.59 57 5.4 1.9 5 23 1248 1266 1246 1266 0.97 6 12 0.022 2.1 9.9 1.1 3 23 1273 1294 1272 1294 0.96 7 12 0.0058 0.56 11.7 0.1 2 23 1310 1330 1309 1330 0.97 8 12 4.7e-05 0.0045 18.3 0.7 1 20 1336 1355 1336 1358 0.91 9 12 0.00059 0.056 14.8 0.4 1 23 1366 1388 1366 1388 0.99 10 12 0.0061 0.58 11.6 7.2 1 23 1394 1416 1394 1416 0.98 11 12 7.1e-06 0.00068 20.9 1.3 1 23 1422 1446 1422 1446 0.98 12 12 0.00071 0.068 14.6 5.5 1 23 1452 1474 1452 1475 0.96
Sequence Information
- Coding Sequence
- ATGGATCAGCTCGTGCAATGTCCAGTATGCACGCTTTACTTGCACAATGGAATGAGCTTGGAGTCCCATCTGGACACCCATCCCAAAGACCAGGTTATAAAAGCTTTATGCTGTTTAACAACAAAAGGGAGCAGTAGTAGCTTTAGTAGCAGAACATCGACACCGTTGCATTCCGAACGATCATACCGGAGCCGGTCCAGGACTCCGGCTGCTGATGACAGGTGGGGAAATACACATAGAAACAGTGAAAATGACCGTTATTGGCGGAGAACACCTAGTCGCACATCAAAGACAAGTCAAATAATTTCCACCTCACGCAATGGAACCCCAGATATAAGAATTGgagatattaattttgaaaacaatatCAATAGTGCCAATCAGTTCTCTGGTTCTGCTTCCTATCCTATAAAATCTGACAAACTTCAGCAACCATATTCAAGTACACCCCCAGTGCCAGAATTTGACCAGCCATATGTTTACTATCAGGATTCAAATGGAGAGGAcagagaaataaaatattctcgTAGTGCAGAATACAACCAGATAGATGGAAACTCAGGTCTTTTTGCCAATAAAACACGATCCCTCACACCTGGTGTCAAATTACAAGCTGCTTTGTTACCGCCAGTTCCGGGAAAAGGCAATGAAAAGCTTGTTAAAGTGTTACCAAAACCAAATAATATACTTGTAAAGGCTAATATGGGTGGGGTACAGTACATAGCACCTGGTGTCAAGCCTATGCGTTTAATGGTGCCTTCAGCTCCTTCGTTTGTTCAGAAAAATGTACAAAACAGTATGATCATGGCCAGCGGGATTCCAGGAACGACAATGGTTGAGACAAAGTCTGTAGCTCCAACGTTGCCTTCTACCCAGTTCAACCAGTTGACCAGCAGTACCTTCACCCCAGGTACAACTGTAGTACAAAattcacaatttatttatagaGAAATGGTTCATAATATTGAtggaaaacgttttatttcttgTGTGCCTTCAGTCCTTAGTCATGAGAATGTAACTAATGTTGCTCAAGGAACTTCTATGTATCAGAATTTGATGGTTGTAGATCAACTTAGGAATGCACCCTGTATGTACACAGCAGCTCAGCCTTTGATACCAAAGCCTTGTGTGACTTCCATATATGCTGACAGTCTGTCTCATTTGCCTAGTAGTACCACAGCTAATGTCGAAAAGGCTGGCCCTTCCACAAATGATGCTAATAAAACTCTTATCATAGAAGTAGGACCCATTGTCCCTCCCAGCTCACAGTGTGAAGTAGCTACCATGACACATCACAACATTACCACTCAAACTGATATAGACATTGCTAAGCCTAGCAAAGTTGAAGTACTCTCAATAGATACATTTGAAAAAAGTGAAACTCCAGGCTCTAGTAAAGGCTTGAAAATCCTAAGCAATATTAAAGTTGAAGTTCCAGTTCAACATCACAAAAATATGTTGAACACTGTAATGGACTTGACTGGGCCCAGTGAATCTGAGTATCCTGTCAGGCCTGTCTCGCCTGAGAAGATCTTGCCTGATTTGGATGACAATAATCAGTTGTCAGATGACTGCACGCAACCTTCAATATCTAGCAGTGACAGTGTGGTATCACACACATTCTCTGTCATTAAAAATGTTGGAAATCCACCTTCCTACAAAGATTCTAAATCAAGTGTGGTAGACAGTAAAATTGAGTCAGAATTTTCAGACAGCTGTCCGGTTCTTGATCTGATTTGTAATGAGAAGCCATCAATATCACCATGTAGTGAATTATCTGAGAGTGGAGAAAATTCAGCAGATCGAACATCAATATCTTCAGTGTCACCGAGAATGCAGATTAAACAGTCAACAAGCAAAGAAAATAGTCCAGATAAGAAAATATCACAACAAAGGACCTACAGAAACACACTCAGGCTGAACAATATTTACGTGAGGAAGAACAAGAAAATACTTCAAATAAAGAATGCCAAGCCCTTGCCTAGCAGTACCATCTCTAGCCTCAGTGTGACCGAGCCTAGAGCATCATCATCAACTTGTAGATCACCAGAAAACTACTCAATGAATAAAATTGGTGACAGGAGTGTGGAACGAGACATGTTGAGCACCATGAAGACTATATCTGTTGAAAAGATTAGTGTAACTGATGATGATAACCATGATTTTGATGCAGATACTGAGGAGCAATCTATGGATATGGAGCCTGTGGGTCCATCAAGCTTGAATAATTCTGATCAGTTCACAACTAGCATTGATGTGGTGCAAGTCAAAGAAGAGATTAACACAAGTAATGAGGAAGCCTACAGTAATGAGAACAGTACAAATCGGGAGATGGTTCCTTTAGAAACGTTACGACCTATCAATGTTATAACATACGGGAACATGCCTTCTGGGGAGTTTGACGAAGAGTCAAACCATAGAGAATTATTAGAACTAGAGGCTTCAAAGAATAACAAATTTGTGAACATGAtgaatgataattattttgggGATAACATCTATGCAGACTACTTCACTCCAGACAGGGTAGAGGCTTTCGATTCTGAGCGTGCGTCATTTTCAAAAGACGGTCCAAAGGATGGCATCTACATGTGGGGAGCTGGTGAGCCTTCCCACAAGGACAGTGAGTTTGTGTTGCCGAACTTTGTTCACGAGAGCTACAAGATTGCGGATAGTGGGGTCGATTATTCGGATATTGGGGGTAGAGAGGGACAGGTGGAGGTGGAGGTGGACGGGTGCGAGCGGGACAGCAAAGCGGACGTGCTGAGCGAGGGTCGTAGCGAGGGCGAGGTGCCGCTGAACATCTGCGCGGATGAGCGGATGCCGCCGCGCGGCGAGCTCAGCGGGCAGGAGAGCAACGGGGATACGGAGCCGCCGTGGAGCGGGATGTACACGGATGTCCCGCCAGCGGAGCCGTACGACCTGATCGCGCGAGAGAGCTGGGTCTCCGACGGGTCCGAGATGGACTCCAGCGAGAAGCGGGACAATTTAGAGGAGGAGGTCCAGCTCCCGAAGGGTCGCGGGCACGCgtgcgcggcgtgcggcgcgcGGCTCGGCTCCGTGCGCGAGCTGCGCGCGCACCGCGCCCTGGCGCACCCCGCGCACCCCGCGCACCCCGCGCACCCCGCGCACCCCGCGCACCCCGCGCACCCCCCGCACCCCGTGCACCCCGCGCACGCGCCGCTCGCCTCCTACAGCCGCCTGCTCACCGTCAGGACCATCAAGAAGGAGGAGAAGACGGATATCACCGACACAGGCTCAATGATGACGATAGATTCTAAGGAGTCGATCACGACGACGATGCTGCAGGTGTACGACGCCATGACGGACGCCAAGCCGAAGATCGAGGGGCTGATCAAGCAGGAGCCCAAGCCACGACGCAAGAGAGACTTCATCTGCCCCACCTGCAAGGTGGACCAGCTAACAGACGTGGCGTTCCACGAGCACCTCAAGATCCACCCTCTGGAGTGTCTCACGTGCGGCAAGTGCTTCTTCAGGCGCGCCAACCTGCAGCTGCACATCAAGACGCATCGGGGGATCAAGAACTACAAATGCGAGGTGTGCGAGAAGAGGTTCGTGACGAAGCAGAAGCTGCAGGAGCACCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACCATCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTCGCGCACAGGGACCGGCACCACTTCCAGAAGAAGGCGAAGGTGCGCGACTTCGTGTGCCACTGCGGCGCCGTGTTCCACTCGCGCGCCAAGCTGCTCTGGCACAAGGAGACGCACGACGACAAGCCCAAGGCGTGTCTGTATTGTAGCGACAAGTTCGTGCACGCGGCGTCGCTCACGCGGCACGTGCGTCGCACGCACAACATGTACTACCTGCCCGACAGCGGCAAGCCCAAGGAGAACGTGCCTTGTCCCGTCTGCAAGCAGATGTATCTGCGTAGCAATCTTCGTGCTCACCTGCTGACGCACAGCGGCAAGCGGCCGTACGCGTGCGTCATATGCAACAAGTCGTTCACCACCAAGTGGAACCTGAAGCTGCACCGATGGACGCACATGAGCCGCTCCGCCAAGCCGTTCaagTGCAACCTGTGCAAGGGCGCGTTCATCCGCCAGGCGGAGTACGTCTCGCACATGAACTCGCACAAGTCTGTCCGGCCGTACACGTGCAACTACTGCGGCTGCCAGTTCATACGCAAGTACAACTGCCAGCGGCACGTGCGCGAGCATCAGGTCGCCAAGAAGTACGTCTGCAAGgtacCTGAATGCGGCAAGTCGTTCCACAGAAGCTACTACCTGTCCGAGCACATGAAGGTGCACAGCGGGGCGCGGCCGTTCTCGTGCAACATCTGCGGGAAGACCTCCAGCAACAAGTCCAACCACAACAAGCACCTCAAGATACACCACGCGAGGGAGCCCGTCGCCACGGAGGCCTAG
- Protein Sequence
- MDQLVQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCCLTTKGSSSSFSSRTSTPLHSERSYRSRSRTPAADDRWGNTHRNSENDRYWRRTPSRTSKTSQIISTSRNGTPDIRIGDINFENNINSANQFSGSASYPIKSDKLQQPYSSTPPVPEFDQPYVYYQDSNGEDREIKYSRSAEYNQIDGNSGLFANKTRSLTPGVKLQAALLPPVPGKGNEKLVKVLPKPNNILVKANMGGVQYIAPGVKPMRLMVPSAPSFVQKNVQNSMIMASGIPGTTMVETKSVAPTLPSTQFNQLTSSTFTPGTTVVQNSQFIYREMVHNIDGKRFISCVPSVLSHENVTNVAQGTSMYQNLMVVDQLRNAPCMYTAAQPLIPKPCVTSIYADSLSHLPSSTTANVEKAGPSTNDANKTLIIEVGPIVPPSSQCEVATMTHHNITTQTDIDIAKPSKVEVLSIDTFEKSETPGSSKGLKILSNIKVEVPVQHHKNMLNTVMDLTGPSESEYPVRPVSPEKILPDLDDNNQLSDDCTQPSISSSDSVVSHTFSVIKNVGNPPSYKDSKSSVVDSKIESEFSDSCPVLDLICNEKPSISPCSELSESGENSADRTSISSVSPRMQIKQSTSKENSPDKKISQQRTYRNTLRLNNIYVRKNKKILQIKNAKPLPSSTISSLSVTEPRASSSTCRSPENYSMNKIGDRSVERDMLSTMKTISVEKISVTDDDNHDFDADTEEQSMDMEPVGPSSLNNSDQFTTSIDVVQVKEEINTSNEEAYSNENSTNREMVPLETLRPINVITYGNMPSGEFDEESNHRELLELEASKNNKFVNMMNDNYFGDNIYADYFTPDRVEAFDSERASFSKDGPKDGIYMWGAGEPSHKDSEFVLPNFVHESYKIADSGVDYSDIGGREGQVEVEVDGCERDSKADVLSEGRSEGEVPLNICADERMPPRGELSGQESNGDTEPPWSGMYTDVPPAEPYDLIARESWVSDGSEMDSSEKRDNLEEEVQLPKGRGHACAACGARLGSVRELRAHRALAHPAHPAHPAHPAHPAHPAHPPHPVHPAHAPLASYSRLLTVRTIKKEEKTDITDTGSMMTIDSKESITTTMLQVYDAMTDAKPKIEGLIKQEPKPRRKRDFICPTCKVDQLTDVAFHEHLKIHPLECLTCGKCFFRRANLQLHIKTHRGIKNYKCEVCEKRFVTKQKLQEHHNVHTGRAPVKCTICDDTFRRYSNMLAHRDRHHFQKKAKVRDFVCHCGAVFHSRAKLLWHKETHDDKPKACLYCSDKFVHAASLTRHVRRTHNMYYLPDSGKPKENVPCPVCKQMYLRSNLRAHLLTHSGKRPYACVICNKSFTTKWNLKLHRWTHMSRSAKPFKCNLCKGAFIRQAEYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHQVAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHLKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00408715; iTF_00961235;
- 90% Identity
- -
- 80% Identity
- -