Basic Information

Insect: Mecyna flavalis
Gene Symbol: -
Assembly: GCA_949319885.1
Location: OX439427.1:17014243-17031114[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0018 0.16 13.4 2.6 2 23 197 218 196 218 0.97

2 29 0.00097 0.086 14.2 0.2 2 19 249 266 248 269 0.92

3 29 1.6e-05 0.0014 19.9 0.2 2 23 300 322 299 322 0.96

4 29 0.67 59 5.3 0.6 2 21 342 361 341 362 0.91

5 29 0.47 41 5.8 0.0 1 23 413 435 413 435 0.95

6 29 9.7e-06 0.00085 20.5 1.4 2 23 477 499 476 499 0.96

7 29 0.00052 0.046 15.1 2.1 2 23 541 563 541 563 0.97

8 29 0.0037 0.32 12.4 0.7 1 23 613 636 613 636 0.96

9 29 0.0029 0.26 12.7 0.0 1 23 695 717 695 717 0.96

10 29 0.00074 0.065 14.6 3.5 2 23 729 750 728 750 0.97

11 29 0.056 5 8.7 2.6 2 23 762 783 761 783 0.96

12 29 0.0049 0.43 12.0 1.7 1 23 793 815 793 815 0.98

13 29 0.0054 0.48 11.9 6.4 1 23 844 866 844 866 0.97

14 29 0.012 1.1 10.8 2.6 1 23 877 899 877 899 0.97

15 29 3.6e-05 0.0032 18.8 0.4 1 23 907 929 907 929 0.98

16 29 0.00075 0.066 14.6 0.4 2 23 949 971 948 971 0.97

17 29 2.5 2.2e+02 3.5 0.8 1 23 989 1011 989 1011 0.91

18 29 2.1 1.9e+02 3.7 2.7 1 21 1018 1038 1018 1040 0.74

19 29 0.028 2.4 9.7 3.6 2 23 1051 1073 1050 1073 0.95

20 29 0.0023 0.2 13.1 0.1 1 23 1095 1117 1095 1117 0.97

21 29 1.2 1e+02 4.5 0.2 2 20 1121 1139 1120 1140 0.91

22 29 3.7 3.3e+02 3.0 3.7 2 23 1160 1182 1159 1182 0.94

23 29 0.22 20 6.8 0.1 2 23 1198 1219 1197 1219 0.94

24 29 3.5 3.1e+02 3.1 5.5 5 23 1229 1247 1227 1247 0.94

25 29 0.016 1.4 10.4 0.8 2 23 1258 1280 1257 1280 0.95

26 29 0.17 15 7.1 2.9 2 23 1297 1315 1297 1315 0.91

27 29 0.26 23 6.6 0.4 2 23 1388 1409 1387 1409 0.93

28 29 0.0021 0.19 13.2 0.4 2 23 1420 1442 1419 1442 0.96

29 29 0.37 32 6.1 3.5 2 20 1480 1498 1479 1500 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0018	0.16	13.4	2.6	2	23	197	218	196	218	0.97
2	29	0.00097	0.086	14.2	0.2	2	19	249	266	248	269	0.92
3	29	1.6e-05	0.0014	19.9	0.2	2	23	300	322	299	322	0.96
4	29	0.67	59	5.3	0.6	2	21	342	361	341	362	0.91
5	29	0.47	41	5.8	0.0	1	23	413	435	413	435	0.95
6	29	9.7e-06	0.00085	20.5	1.4	2	23	477	499	476	499	0.96
7	29	0.00052	0.046	15.1	2.1	2	23	541	563	541	563	0.97
8	29	0.0037	0.32	12.4	0.7	1	23	613	636	613	636	0.96
9	29	0.0029	0.26	12.7	0.0	1	23	695	717	695	717	0.96
10	29	0.00074	0.065	14.6	3.5	2	23	729	750	728	750	0.97
11	29	0.056	5	8.7	2.6	2	23	762	783	761	783	0.96
12	29	0.0049	0.43	12.0	1.7	1	23	793	815	793	815	0.98
13	29	0.0054	0.48	11.9	6.4	1	23	844	866	844	866	0.97
14	29	0.012	1.1	10.8	2.6	1	23	877	899	877	899	0.97
15	29	3.6e-05	0.0032	18.8	0.4	1	23	907	929	907	929	0.98
16	29	0.00075	0.066	14.6	0.4	2	23	949	971	948	971	0.97
17	29	2.5	2.2e+02	3.5	0.8	1	23	989	1011	989	1011	0.91
18	29	2.1	1.9e+02	3.7	2.7	1	21	1018	1038	1018	1040	0.74
19	29	0.028	2.4	9.7	3.6	2	23	1051	1073	1050	1073	0.95
20	29	0.0023	0.2	13.1	0.1	1	23	1095	1117	1095	1117	0.97
21	29	1.2	1e+02	4.5	0.2	2	20	1121	1139	1120	1140	0.91
22	29	3.7	3.3e+02	3.0	3.7	2	23	1160	1182	1159	1182	0.94
23	29	0.22	20	6.8	0.1	2	23	1198	1219	1197	1219	0.94
24	29	3.5	3.1e+02	3.1	5.5	5	23	1229	1247	1227	1247	0.94
25	29	0.016	1.4	10.4	0.8	2	23	1258	1280	1257	1280	0.95
26	29	0.17	15	7.1	2.9	2	23	1297	1315	1297	1315	0.91
27	29	0.26	23	6.6	0.4	2	23	1388	1409	1387	1409	0.93
28	29	0.0021	0.19	13.2	0.4	2	23	1420	1442	1419	1442	0.96
29	29	0.37	32	6.1	3.5	2	20	1480	1498	1479	1500	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTGGGCAAATGCAGGCTTTGCCTGAAGCTCGGCGATTTTTATTCGATATTTGCGGTAGACAATGCCGTGCAACTCGCAGAGATGGTCATGGAATGTGCCCGGGTCAAGATCTACGAAGGGGACGGCTTACCTGACAAGATTTGTTCGGAGTGCGTGCAGAAGCTGAGCAGTGCTTATATCTTCAAGCAACAGTGTGAACGCGCTGACCAGGAGCTGCGCCGCAATTATGTTCCACCACCAGGTTTCAGCATATCACCACCCCCTCCGAACAGACAAAGCAGCGACTCTGCTTTCTCCACGCACACCGACGTGTCAAACCAAACCAAGCCGTCCTCTTCTGCCGAGACGCCGTCGAGCACGCCCGCGCCGCGCGGCCGCAAGCGCAGCCGCGAGAGCGACGCCGCCGCGCCCGACCGCTCGCCGCACGCGCCCAGCGCCAAGCGCGTCGCCGAGCTGCGCCAGGCCAGGAAGAAGCGAGCCGCCTACGAGGCCGACTCCGACTACGAGGACGACGCCTCCTTCTCCCCCTACTCCGGCGGGACCGACTCCGACGAACCTCTAGTCAAGGAAAGGCTCAAATGCCCTCAGTGCCCTCGGACGTTCGCCACTATGAAGAGCCGCTGTGGGCACATGAGGACGCATAATAAAGACAAGTCCCTCGGCGAGAACGAGGTGGTCAGCATCCCGAAAAAAGTCGCGACCGAGGACGCGACTGACGACGACGAGAAGCTCTCTTGCGACAAGTGCGGGAAGACTTTCAAGTTAAATATAATGCTGAAGCGGCACGCAGACATGTGCGGGGTGCGGACTGAGGTCTCCCCGCGGAAGGAGCTGATGATCGCTCTCGAACCCATTGATGCGGCTCCGCCGAAGACGAATAAAATCGAGTGCGAAATTTGCACGGCAAAATTTAAAAGCGTAGATAACCTCCGGAAACATATGCGGGTGGTTCACGCCGCGGCTCTCAACCCTGACCAGTCGCCAGTGAAACCGAAACCGACGGTATCGATTCCCTGCGTATTCTGCCGGAAGTGCTTCGACGACTACTACGTATACACCGCTCATTATAACAGCTGCAGTAAGAAGCGAGACCTGGAGTCGATCTCCTGTCCTGCATGTAAGAGCGTGATGGGGAAGCGGGCGGCGTTCTTTGTGCATTTGAAAAACCTCCATTTTGAGCCTAAAGTGCCGAAGACGGAGCCGACGGAGAGTAAGAAGAGTACGTTCGAGTGCCGGATGTGCAGCGAGCTGCTGCCGTCGCAGGCGCAGCTCATCACGCACCTCGCCGCGCACATGGCGAAGATGGACGGCGGCCCTGACGCGCTGGCTGACGAAGATTCCAGGCCCAGTACCATTGGCGACTCCGTCTCGATCGGATCCGACTACAGCTCGTCGCAGGTAACCTCGGGCCCGCTGAAGTGTAACGTGTGCGACAAAAGCTTCACTTACAAGAAGGCCCTGGAGACGCACCGTCAGAAGGTGCACTCGAAGACGGAGGTGCCGGTGAAGGCGGAGCCGCCCGACCGGCCGCCGCCCAACCTGCTGAGCGAGGCCGCCGACCCCGGCCCGTCCGAGTCCGAGTCCAGCCCCGACGAGGGCGAGGACAACACCTGCGACATCTGCGACAAGCAGTTCTCGTACCGGCGGCTGCTCGACCAGCACAAGCGGACGAAGCACAACATGAGCTCGGGCACGAAGCGCGCCAAGATCAACCTCAAGGACTGCTCCGTGCGCTGCCTCATCTGCGACCTCGAGATGAAAGTGAGCGCCATCAACGAGCACAACCAGAAGCACACGTCGATCGGCATCAAGCCGCGCAACGAGTACACGTGCGCGGACTGCGCCGCGCGCTTCAAGAGCTGCAGCGCGCTGGCCAGCCACATCAAGTTCGTGCACCGCCTGCGCCAGCCGCGCGACCCGCAGGCGCCGCGCGCGCTGCAGGGCGGCGAGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGTGATCCAGAGTCACAACGGCTTTGGGGAGGTTCCGGGCGGCTCGGCGGACGCGCCCGTCGGCGACGGGTTCGCCTGCCCGATCTGCGGCAAGAACATGCCGACGCTGATATCCCTCAAGAGGCACGTCAACTGGCACCAGAATGTCGGGAACAATATCGAGAAGATAGTAGAGTGTTTCGTCTGTAAAGAGACATTCCGTTTCAAGGGTCACTTCAAGCTGCACATGCGGCAGCACTACCGAGACCCGAACCTCGACCCGAAGCACCTGACGTGCCCCATCTGCCACCGGCGCAGCAAGCATCTGCGCGCCGCGCAGGCCCACATGAACTTCCACAAGCAGACGCGCTTCCAGAACAAGGACTACGAGTGCTCCATCTGCAAGAGAGTGTTCCAGCACCGGAAAGTCTACCTCTCCCACATGGCCATCCACTTCAAGCGCGGCGAGAGCGTCCAGAACACGATAGTCGGCGACCAGCTTCCGCAGACCGCCGACCGGACCGTGTTCGACGGCACGCACACCTGCGCCCACTGCGGGAAGGTCTGCGACTCGGAGAACTCGCTCAAGCACCACGTCCGCTGGCACAAATCCAAGTCGTCTCTCTTCGGCGCGCGGCACGAGTGCTTCGTCTGTCAGCTGGTGTTCACCAACAAACGCCGCCTCGATATCCACACCAGATCCCACTACGAGGACGACAACGGCCCCTACAAATGCACCATATGCGGCAAGGGATACATCGACGAGGACTACTACAAGCGGCACGTCAAGGGTCACAACTTCGATCACCAGGTCCATAAGGATCGAATAGCGAAGTTGAGAAAGGATAAGGTGAAGTGTCCTATCTGTGCGCGCTTCTATCCCGATCTAATCCATCTGATTCGGCACTTGCGGCGGACTCACCCGGAGAGCAAAATGATCAAAACCGACCCTGATGCTCCTCCACCGAGCTACTTCTCTTGCAAGCTTTGCGCCAGGGTTTTCCTCGACGTCCACCGGCTGCAGAGGCACGAGGAAGCGCACATGAGAAAGCCTTTGTTCTTCAAGTGCAAGTTCTGCGGAAAGAACACATCTTCATTGAAAATTCACAATGTCCATATTAAATCTCATTTAACGCAGAAATATTTAGATAATCCATTGAAGTGCACGCAGTGTGATGAGAAGTTCTACAAAGGTTACGACTTGCACCATCATCTGCGCGACGTGCATCAAATCAACGAGACCTGGATAGCGGAGAAGACGGAGCCGACTCTCAACGGGCCGCTGCGGGAGTTCCAGTGCGCCATCTGCCTCAAGGTGCTCGCCAGCAAGGGCAACTACGAGCGGCACATCGACTACCACAACACGCTGCGTTGCAACTACTGCTTCGTCTACTTCAGCACCCTGAGATTCCTCGAAGGCCATCTGGCTTTCAGCTGCGAAAAGAAAAAGCTTATAGGCGACACCGAGATATATCCTAAGAAGATTAAATGCCCCCAGTGCTATAAAGCTTTTCATTTGCAAGTCAAGTTGGATTGCCATTTGCGAACTCAGCACGGAGTAAAAGTGAATAGAGAGGCATCTTCTAGCAAGAAAGAGATCGTGTGCGACTTCTGCTTCAGGGTTTTCGAGAACGAGGAGGCGTTAGGCTCCCACAAGATATATCACCGCACTATAGGCTATTTCGGCTGCATTTATTGTAAGAGAAAGTTCAACACGCTCACTCTGTATAGGAAACACAAGAACCATCACTTCTCGCAGCTGAACGTGGACAACCCCACGAAGTGTGAGCACTGCGATGAGACGTTCGTAGCGTTCCGCGAGATGATCTACCACATGCGCGACGTGCACGGCGACGACAAGGAGTGGGTGGTCATGCCGAAGGATTCCATAGAGGAGACGTGCCCGATATGCAACAAGACGTTCTTCAACCTGCATAGACATCTCGAGTATCACGAGGACAACAGATGCAAAAAATGCGCCGAGTACTTCTTCTCGCGGGTCGACTTCGACAACCACCTCTGCTCCATCGAGAGCGACGACGAAAGCGCGCAGAACAACGAGAACAGCCTGCTACCCGCCTACGAGGAGTGCCGGTTCTGCTTCAAGCCGATAACCAGAATAAGCTCGAAGGCGAAGCACGACGGCATCCACAAGGGCTCGGGGTCGATATCCTGTCGGTTCTGCCCGCTCAAGTTCAAAACCATTGACGCGTTCAACATCCACGCGTTCTCGCACCGCAGCAGGAAGTACACCAAGCGGCCGATCAAGTGCCGCGTGTGCGGCGAGAAGTTTGTCAAATACGGGCCGTTCATGAAGCATATGAAGTCAGTGCACAAGTCGACCAAGAAGGTGCACTACCGCGCGCAGGTGCTGCCCGAGCGCTGCGTCGTCTGCGGCGACGACTTCCCCAACCTGCACAATCACTACCGCGCGCATTTGCAGAACCAGTGCCAGCAGTGCTTCAAGTACTTCACGTCTGCGCGGCTGTTCAGCCGGCACCGGTGCGACGCGGAGGACGCCGACCCCTCCAAGGTGTTCGTGTGCGACGAAAACCTGCAGGCGCATATTAACGCGTACGTGCCGAAGGACTTGAAGGATGACGAGAAGTTCTACGGACACAGTGACGAGGAGGACGAGGAACCGCCCGCTCCCGAGCCGGACCCCGACCGGAAGCCTGCGCTCAGCCAGGACGACGATAGTCAACCCGGTAACCGAGTCGACTCCATCACTTTCTCGGAGGATCAGGACGACGCTAGTCAAGATGAGAAAAATCTTCATTTCATGGTCTCGTCCCCCATAATCTCTGACGTGCTATCTCTATATCAGAATAAGGAGGACGATAAGGAAAACGACAAAGATGTGGTTGTACTGACTGATGATGATTCGATGGATATCGATGTTAGTATCCCAGTCATAACGATTGACTAG
Protein Sequence: MALKLGKCRLCLKLGDFYSIFAVDNAVQLAEMVMECARVKIYEGDGLPDKICSECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDVSNQTKPSSSAETPSSTPAPRGRKRSRESDAAAPDRSPHAPSAKRVAELRQARKKRAAYEADSDYEDDASFSPYSGGTDSDEPLVKERLKCPQCPRTFATMKSRCGHMRTHNKDKSLGENEVVSIPKKVATEDATDDDEKLSCDKCGKTFKLNIMLKRHADMCGVRTEVSPRKELMIALEPIDAAPPKTNKIECEICTAKFKSVDNLRKHMRVVHAAALNPDQSPVKPKPTVSIPCVFCRKCFDDYYVYTAHYNSCSKKRDLESISCPACKSVMGKRAAFFVHLKNLHFEPKVPKTEPTESKKSTFECRMCSELLPSQAQLITHLAAHMAKMDGGPDALADEDSRPSTIGDSVSIGSDYSSSQVTSGPLKCNVCDKSFTYKKALETHRQKVHSKTEVPVKAEPPDRPPPNLLSEAADPGPSESESSPDEGEDNTCDICDKQFSYRRLLDQHKRTKHNMSSGTKRAKINLKDCSVRCLICDLEMKVSAINEHNQKHTSIGIKPRNEYTCADCAARFKSCSALASHIKFVHRLRQPRDPQAPRALQGGEDLADFCEVVVTKAEPLDVIQSHNGFGEVPGGSADAPVGDGFACPICGKNMPTLISLKRHVNWHQNVGNNIEKIVECFVCKETFRFKGHFKLHMRQHYRDPNLDPKHLTCPICHRRSKHLRAAQAHMNFHKQTRFQNKDYECSICKRVFQHRKVYLSHMAIHFKRGESVQNTIVGDQLPQTADRTVFDGTHTCAHCGKVCDSENSLKHHVRWHKSKSSLFGARHECFVCQLVFTNKRRLDIHTRSHYEDDNGPYKCTICGKGYIDEDYYKRHVKGHNFDHQVHKDRIAKLRKDKVKCPICARFYPDLIHLIRHLRRTHPESKMIKTDPDAPPPSYFSCKLCARVFLDVHRLQRHEEAHMRKPLFFKCKFCGKNTSSLKIHNVHIKSHLTQKYLDNPLKCTQCDEKFYKGYDLHHHLRDVHQINETWIAEKTEPTLNGPLREFQCAICLKVLASKGNYERHIDYHNTLRCNYCFVYFSTLRFLEGHLAFSCEKKKLIGDTEIYPKKIKCPQCYKAFHLQVKLDCHLRTQHGVKVNREASSSKKEIVCDFCFRVFENEEALGSHKIYHRTIGYFGCIYCKRKFNTLTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWVVMPKDSIEETCPICNKTFFNLHRHLEYHEDNRCKKCAEYFFSRVDFDNHLCSIESDDESAQNNENSLLPAYEECRFCFKPITRISSKAKHDGIHKGSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYTKRPIKCRVCGEKFVKYGPFMKHMKSVHKSTKKVHYRAQVLPERCVVCGDDFPNLHNHYRAHLQNQCQQCFKYFTSARLFSRHRCDAEDADPSKVFVCDENLQAHINAYVPKDLKDDEKFYGHSDEEDEEPPAPEPDPDRKPALSQDDDSQPGNRVDSITFSEDQDDASQDEKNLHFMVSSPIISDVLSLYQNKEDDKENDKDVVVLTDDDSMDIDVSIPVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01071809;
90% Identity: -
80% Identity: -