Mfla011960.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- -
- Assembly
- GCA_949319885.1
- Location
- OX439421.1:5881837-5884164[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0069 8.2 7.4 1.7 18 43 9 31 7 32 0.94 2 19 3.1 3.6e+03 -1.0 0.4 19 43 38 59 33 60 0.67 3 19 0.00025 0.29 12.1 0.1 18 43 68 90 61 91 0.92 4 19 0.0088 10 7.1 1.0 17 43 98 121 94 122 0.86 5 19 0.057 67 4.5 0.1 18 43 129 151 124 152 0.88 6 19 0.00013 0.15 13.0 2.6 16 44 157 182 153 184 0.90 7 19 0.0069 8.2 7.4 5.5 2 43 172 210 172 211 0.91 8 19 0.0086 10 7.1 0.1 18 43 219 241 211 242 0.77 9 19 0.17 2e+02 3.0 0.1 15 44 258 284 251 284 0.83 10 19 0.55 6.6e+02 1.4 0.0 10 40 304 331 301 335 0.71 11 19 0.2 2.4e+02 2.8 0.0 15 27 368 380 364 394 0.80 12 19 0.076 90 4.1 4.4 18 43 418 440 413 441 0.90 13 19 1 1.2e+03 0.5 9.8 8 29 437 458 432 470 0.69 14 19 0.0024 2.9 8.9 3.2 13 43 471 498 463 499 0.78 15 19 0.076 90 4.1 0.8 17 44 504 528 500 528 0.85 16 19 0.64 7.6e+02 1.2 0.8 18 28 535 545 531 558 0.82 17 19 1.2 1.4e+03 0.3 0.1 19 43 566 587 561 588 0.74 18 19 0.00022 0.26 12.3 2.4 18 43 630 652 616 653 0.91 19 19 1.6 1.9e+03 -0.1 0.1 12 29 667 684 663 699 0.76
Sequence Information
- Coding Sequence
- atgtttcaaaatttattagaCTATGTTTGCGATTACTGCAATCGAAGTTTTACTCGAAAGTACAACTTGCAGACTCACATAGAGAACTGTCATTTGAACTCCACTTGCTATTGTGAAATTTGCGATCAAAGATTTGGAAGTCCAGCTGGCTTATTACTGCATCTCAATCGTGGGCACAATAAGTATGCCCAGCCATACCCAGAATGTGATATATGCGGACGAATCTTTACTAGGAAACAGAATATCATGTCGCATATGATCACTGTGCATTTCCAAGGAAGTGGGCGCCAGATAAAATGCCAAGTTTGTGACAAAACGTTCACGACGGAGAAGAACTTGAGACGGCATACAAACCAGCTGCATAATCCAGATGTACAGTATCCTACTTGTAATGATTGTAAAAGGGTGTTCAAAGGGAAGCATTCCCTTATAGCCCATATACAAGCAATCCACGGTTCTGGTAAAGACGCAATCAAATGTAACTTGTGCGATAAAGTTTATACGAATAATAGGAATTTGAAGAGACACATAGAAATATCGCATAAAGAACGAGGTGTTTTTCGCTGCGATTTGTGTCCGAAAGTTTACACGTCAAATCATAGTTTAAAACGACATGCGAAAACTAGACACTGCACAGAAGATGGCGACCAGTACGCTTGTGAATATTGCGACAAAGTTATAACTGGAAGAGACAATTTAGATACACACGTTTTGTCGTTTCACAAACAAGCTTATTCGATGGATTGTAGCGAAGTCGCTTCGTCGAAAACTAACGATTACGTCTGCGATTCTTGTTCTAAAACCTTTGAAGATGAACCGCGTTTAAGGCACCATGTGAAAACAGAGCATTCGTTCAAAACATTTTACAAGTATTGCAAGAATTCCCTGCTCAAGCAAATGGGTAAAGATGTACCTAGCAAAAGtgtattttataaatgcgaattCTGTGGGATTGGTTTTACGAGCGTGTATGAGTTGAAGGATCATATGAAATTAACTCATGATAAAGAGTATTCTCTATCAACTTGCAATGTGTGCTTTAGCAAGTTTTATAGCAAAGATACCATGTCtgatcataaaaaaatatgtttgccTCCACCCAATGTAAACACTTGTAGTCACTGCGATAAGTTATTCACGGATATATCAAGTTTGGAATTTCATACTCGTATTTTCCACCCGCAAGCACAAATAGCAGACTCTAACATAAGTTCTACGAATGATAATGAAAATCCAGATATGATTTCCTACAAGTGTGACCATTGCGAGCGCATTTATTACAGCGATAGGTCTTTGAAGCATCATATTAAGCTGAAACATACGACAGACGAAGCAATGGAATGTGAATACTGTGGGAAGATTTGCAGTAACAAATATTACTTAGCTTCTCACATAAAAATAGTACATAGCAACGATTCTTGGTCGAAATGCGGTTATTGCGACAAACAATTCAAATCTAAGAGGAATATTCGAAGGCACATAGAATATACGCATTTAGGGATGCAAAGATACAAATGTATTGAGTGTGAAACACTGTTTAAAGAGAAGCGAAGTTTGAGAAAGCATGTAAGGACCAAACATCCGAATTCTACTGCATTCCCTCAGTGCCACTTCTGCCATAAAAGATTCGAATCGGCTAAATCGTGCAAAATACATTTAAAGCTGTTACATTCCTTTAACATGAACACATTTCCTTGTGACCTTTGTTCCGTGTCGTTTAGTTCTAACGAAGCTCTATCGATACATTTACAGACTAAGCATTTAGCTGAAGACGAAATATACAAATGTGAAGAATGTAATCTAGTCTTCAAAGGGCAGGAAAGATTTGAGCAACACAATTTAGGTTGTCACGTTAAAATTCAAAACGTGATTCAGAAAGTGCTACCGCGCTGTATTATTTGTATGAAAGATTTCAGCACAAGAAAAACTTTAAAGAGACATATAAAGAAGTTTCACGAAGAATTTGATGTTGACGAATTGGTTGCTTTCGGGGCAAATAGGAGAAACTTTAGTGTCGAATGTGCAGATTGTCTAAAGAAATTTAACGATGACACGCACTATAATGTGTACCAGAAAATGAAACATATAAGAGATGCGATAATTTTCAAATGTGAGACTTGTTTGTACTCTTACAATTCGCTAGAGTACTCTATAGAGCGATATAAGTTGACCAGTTTTGATAGTTGTAAAGGAAAAATGATTCTGAGTGAGTTATGTACCGCTGAGATGAGTGAAGAGGAGGAGGATTTTGGGTCCCATCATGAGGCGGTGAGCACTACCAGTGATATCAAGTTAGAATTAGTTGAAGAGACTTCTGAAACTGAATGA
- Protein Sequence
- MFQNLLDYVCDYCNRSFTRKYNLQTHIENCHLNSTCYCEICDQRFGSPAGLLLHLNRGHNKYAQPYPECDICGRIFTRKQNIMSHMITVHFQGSGRQIKCQVCDKTFTTEKNLRRHTNQLHNPDVQYPTCNDCKRVFKGKHSLIAHIQAIHGSGKDAIKCNLCDKVYTNNRNLKRHIEISHKERGVFRCDLCPKVYTSNHSLKRHAKTRHCTEDGDQYACEYCDKVITGRDNLDTHVLSFHKQAYSMDCSEVASSKTNDYVCDSCSKTFEDEPRLRHHVKTEHSFKTFYKYCKNSLLKQMGKDVPSKSVFYKCEFCGIGFTSVYELKDHMKLTHDKEYSLSTCNVCFSKFYSKDTMSDHKKICLPPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNDNENPDMISYKCDHCERIYYSDRSLKHHIKLKHTTDEAMECEYCGKICSNKYYLASHIKIVHSNDSWSKCGYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHFCHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSNEALSIHLQTKHLAEDEIYKCEECNLVFKGQERFEQHNLGCHVKIQNVIQKVLPRCIICMKDFSTRKTLKRHIKKFHEEFDVDELVAFGANRRNFSVECADCLKKFNDDTHYNVYQKMKHIRDAIIFKCETCLYSYNSLEYSIERYKLTSFDSCKGKMILSELCTAEMSEEEEDFGSHHEAVSTTSDIKLELVEETSETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00961150;
- 90% Identity
- iTF_00961150;
- 80% Identity
- iTF_00961150;