Mmes013873.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mechanitis messenoides
Gene Symbol
nfxl1
Assembly
GCA_959347415.1
Location
OY365766.1:11582078-11584552[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 3 2.8e+04 -5.0 1.9 15 19 134 138 134 138 0.85
2 17 0.016 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 17 4.7e-07 0.0044 17.6 15.9 3 19 186 202 185 202 0.95
4 17 4.2e-05 0.4 11.4 13.5 3 18 239 254 237 255 0.91
5 17 2.1e-08 0.0002 21.9 11.0 1 19 290 308 290 308 0.99
6 17 1e-05 0.095 13.4 16.5 3 19 345 361 344 361 0.93
7 17 0.0001 0.95 10.2 20.3 1 18 395 412 395 413 0.97
8 17 1.7e-08 0.00017 22.2 12.8 1 19 422 440 422 440 0.98
9 17 6.5e-05 0.62 10.8 5.2 9 19 488 498 486 498 0.90
10 17 0.082 7.7e+02 0.9 6.5 4 12 510 518 508 518 0.90
11 17 0.47 4.5e+03 -1.6 3.3 14 18 547 551 547 552 0.86
12 17 0.94 8.9e+03 -2.5 0.3 8 11 568 571 567 571 0.79
13 17 4.5e-06 0.043 14.5 6.6 1 15 588 602 588 604 0.86
14 17 1.2 1.1e+04 -2.8 1.3 15 18 613 616 612 617 0.84
15 17 0.00046 4.4 8.1 16.8 3 18 629 645 628 646 0.81
16 17 3 2.8e+04 -5.1 2.4 9 13 652 656 651 656 0.74
17 17 1.5e-06 0.014 16.0 10.6 1 16 687 701 687 707 0.91

Sequence Information

Coding Sequence
ATGGCCCGAAGATACCGTGATGCTGCTGCCAAATTGCAGCAAAATGTTCAAAAGCACTTACAAGGGATGAAGGAATTGTCTTCGTCTGAAGATGACGAGCCTTTTGAACCAAGTGTATTAGATGGAATGTTTCAGAGCTATTGGAAAGGGGGTGGAGATACACAGCTGCTCAACAGAACTAAAAATCTTCTAGAAGAAGCTATAAGTGGTCGATCAATTACTTGCTTAATTTGTATAGGTTCCATTAAACGCGCCGATGCTATTTGGACATGTGAGCACTGTTACTCCTATTTCCATTTATCTTGCATTCAAAAATGGTCGAATGATAGTATTAGTTTACGTAATGAAGAAAATCAGGGCTCGATTACCGTATGCATGCCAAAAAAAGAAGAATGGTATTGTCCAAAATGTAGACACTCGTATAATAAAGAGCAAATTCCTCGTAAGTATCGTTGTTACTGTGGCAAGACAGATGATCCTCCATTACATCCATGGCTCATACCCCATACATGCGGTGAGGTATGTGGGAAACTACTATCAGCTGGAGACAATTGCAAGCACAAGTGCCTTCTACTTTGCCACCCTGGCCCCTGCCCACCATGCCCACAAACAGTAAATGGGACATGTTATTGTGGTAAGGAAGGTAAACGAATAAGATGTAGTGCTGCCAAATGGTCATGTagacaaaaatgtaaaagaatttTGCCTTGTAAATCTCATAAATGTGAAAATGAATGTCATGAGAATGATTGCCCTCCCTGTAATTACACTAGCTTGCAAAGTTGTCAATGTGGAGCAGAAAAGACAAAGCGCCCATGTAATGATCTAATTtggaaatgtaaaaaacagtgtAATAAACCATTTGCTTGTGGTTACCATGCATGTGAGAAAATTTGTCATGCAGGTAGTTGTGGGGACTGTCCAAACTCAGGAGAAAGAACATGTCCATGTGGAGCAAGTCAGAAATTTATACAATGTCCAGACACCATTGAAACTTGTCTTGGAACATGCAGTAAGAAACATGATGATTGTGAACACAGCTGTCCAGATAAATGCCATAAAGGTTCTTGTCCACCATGCcaagttttaattgaaaaaagatGTCAATGCTGCACTCATAGCAGATCCCTGCCTTGTAGTAAAGAATATAGATGTGACACAAAATGCAGAGGGATTAGACCATGTGGTAAACATGGCTGCGGTCGTAAATGCTGCAATGGCAACTGTCCTCCTTGTGAAAAGCCATGTGATAAACCTTTACAATGTAGTCGTCACAAATGTACGACAATTTGTCATCGTGGGCCCTGTTATCCATGCCCACTTGAATCTAAAGTTACATGTCGTTGCAAGGAAACATATGTGATGGTCCCTTGTGGTAGAGAGAGACATACAAAGCCACCAAAATGTAACATggtatgcaaaataaaatataaatgtggaCACATTGATGAAAATAAGCACATTTGCCATTTTGGAGATTGCCCACCCTGCAAAGCAACTTGTTACAAAACATATGAAAGTTGTGATCACAGATGTGTTTCAACATGTCATGAATATGTATTGGTTGTGTTTAAGCAAATTGAAAAACCAGCTACTCCTTGGGAAGTGCAACCTCCAAAGACTAAGATAGTAGCTCTCAATTGCCCCCCATGTGAGACACCAATTATGATCACATGCTTTGGTGAACATGAAACTGAGAATCAACCTTGCCACATAGCTATAAGACGACCTTGCGGAAGAGACTGTGGCCGCCCACTAGAATGTGGTAACCATAAATGTGAACTTCCATGTCATTTATATGAATGTAATTCAGATTATCCCAATGTGCCTTACACATGCAAGCCATGTAATAGGGAGTGCTCAGTGATCCGTCCGCTAAAATGTACACACAAATGTTCAAAACAAGGTTGCCACAAGGGACCTTGCCCACCCTGTAATATTTTAGAGAGAGTACCTTGTCACTGTGGTgtaactgaaatatatataagatgtcGAGAATTAAACACTGCTACTGAAGAAATGTTAAGTTGTAAACAGCAATGTCCAAAAAGTTTAGAGTGTGGTCATAgatgtaaaaatgtttgtcaTTTGGGTGACTGCGGAAAAAATCAAATCTGCACTAAGAAGACTAAGATTCATTGTTCTTGCGGAAACTTGAAGAAAGAAGCAGCATGTAATGATGTTAGGAAATCTGACCTGAAAATTGATTGTGATAAAAGTTGTGAAGCTAAAAAGGTGGCTGCCCAGctagaaaaagaaaatgagaCAAAAAGACTTAAAGAACTAGAAGAAGAGAGGAACCGTAGAGAATTAGAGGAGTATGAATGGAAATTAAGtggcaaaaagaaaaaatataaggaaaaGAAAGTTGTAATAGTTACCGATAACAGAAATTGGATTCAAAAATACTGGGTTcctattatatctattttacttGGTATTGTGTCtgctatttattatgtatttcaagtttga
Protein Sequence
MARRYRDAAAKLQQNVQKHLQGMKELSSSEDDEPFEPSVLDGMFQSYWKGGGDTQLLNRTKNLLEEAISGRSITCLICIGSIKRADAIWTCEHCYSYFHLSCIQKWSNDSISLRNEENQGSITVCMPKKEEWYCPKCRHSYNKEQIPRKYRCYCGKTDDPPLHPWLIPHTCGEVCGKLLSAGDNCKHKCLLLCHPGPCPPCPQTVNGTCYCGKEGKRIRCSAAKWSCRQKCKRILPCKSHKCENECHENDCPPCNYTSLQSCQCGAEKTKRPCNDLIWKCKKQCNKPFACGYHACEKICHAGSCGDCPNSGERTCPCGASQKFIQCPDTIETCLGTCSKKHDDCEHSCPDKCHKGSCPPCQVLIEKRCQCCTHSRSLPCSKEYRCDTKCRGIRPCGKHGCGRKCCNGNCPPCEKPCDKPLQCSRHKCTTICHRGPCYPCPLESKVTCRCKETYVMVPCGRERHTKPPKCNMVCKIKYKCGHIDENKHICHFGDCPPCKATCYKTYESCDHRCVSTCHEYVLVVFKQIEKPATPWEVQPPKTKIVALNCPPCETPIMITCFGEHETENQPCHIAIRRPCGRDCGRPLECGNHKCELPCHLYECNSDYPNVPYTCKPCNRECSVIRPLKCTHKCSKQGCHKGPCPPCNILERVPCHCGVTEIYIRCRELNTATEEMLSCKQQCPKSLECGHRCKNVCHLGDCGKNQICTKKTKIHCSCGNLKKEAACNDVRKSDLKIDCDKSCEAKKVAAQLEKENETKRLKELEEERNRRELEEYEWKLSGKKKKYKEKKVVIVTDNRNWIQKYWVPIISILLGIVSAIYYVFQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01035137;
90% Identity
iTF_00959852;
80% Identity
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