Basic Information

Insect: Mechanitis messenoides
Gene Symbol: -
Assembly: GCA_959347415.1
Location: OY365764.1:8395142-8401191[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.1e-05 0.0038 18.2 2.4 1 23 247 269 247 269 0.98

2 12 1.4 1.3e+02 4.0 5.2 1 23 277 300 277 300 0.92

3 12 0.99 92 4.4 0.9 1 23 304 327 304 327 0.92

4 12 0.00048 0.044 14.9 2.6 1 23 403 425 403 425 0.99

5 12 0.035 3.2 9.0 5.0 1 23 433 456 433 456 0.98

6 12 0.5 46 5.4 2.9 1 23 460 482 460 482 0.97

7 12 3.3e-05 0.003 18.5 1.6 1 23 487 510 487 510 0.98

8 12 0.07 6.5 8.1 1.2 1 23 514 537 514 537 0.89

9 12 0.12 11 7.3 0.2 2 19 555 572 554 575 0.92

10 12 2.3e-06 0.00021 22.2 1.2 1 23 650 672 650 672 0.98

11 12 0.002 0.19 12.9 1.7 1 23 678 700 678 700 0.96

12 12 4.4e-06 0.00041 21.3 2.6 1 23 706 729 706 729 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.1e-05	0.0038	18.2	2.4	1	23	247	269	247	269	0.98
2	12	1.4	1.3e+02	4.0	5.2	1	23	277	300	277	300	0.92
3	12	0.99	92	4.4	0.9	1	23	304	327	304	327	0.92
4	12	0.00048	0.044	14.9	2.6	1	23	403	425	403	425	0.99
5	12	0.035	3.2	9.0	5.0	1	23	433	456	433	456	0.98
6	12	0.5	46	5.4	2.9	1	23	460	482	460	482	0.97
7	12	3.3e-05	0.003	18.5	1.6	1	23	487	510	487	510	0.98
8	12	0.07	6.5	8.1	1.2	1	23	514	537	514	537	0.89
9	12	0.12	11	7.3	0.2	2	19	555	572	554	575	0.92
10	12	2.3e-06	0.00021	22.2	1.2	1	23	650	672	650	672	0.98
11	12	0.002	0.19	12.9	1.7	1	23	678	700	678	700	0.96
12	12	4.4e-06	0.00041	21.3	2.6	1	23	706	729	706	729	0.98

Sequence Information

Coding Sequence: ATGTTTGACCTAAAAGCCTGTGTAGTGTGTTTGAAAACAgatgtacaaatatttagtatgaACACCGGACAACTTAGGCaacaattctatttaatagCTGGGATAAAGacAAAATGTGAAGATGGTCTACCAGAATATTTGTGTTATCAGTGTAAAGGATACGTAAAAAGCTTCCTTAGGTTTCGTGAAAAATGCCAAagaacatattatttgttgCAAGAAATTTTACGTACAAATAATGAGataacaaaatcaatattagaTGAATTAGATTATAATGTTCTTGATATAGGACCCACCCTGGCTTACATAGATCCAGGTAAAGGTCGCACCCGATACGaagacataaaatttaaatgggtAAAGCAAAACCGTATTTGTATAGAACCTCAACAGAATATACCTGTGATATTATGCAGTACagcagaaaatatatttgatgttcCAACACAAACAGCAAAATTAACTGAAGATTATGTTAAAAAcgagaataattataataatatttctgttacTTCAAGCAGTAATGCTTGtgttaagaaaaatgaaattgatttGTTTGATACTCACAttgaaattagtaataatgagTTAGATGAAGTTCTGGAGTCTCAAGAGAGCCGAGCAGATGATGCTGATGGATCCATTTTGGATGAGGAATACGGCAATGTTGTTGCTATTAGCTTGAAGGAGGCACAGGCCGTTGTTGAAGTGAATAAGAAGTTTGCTATTGGAAAGTTTCGTTGTGAAATCTGTGATAAGGCTTactgtaatgaaaaaaatttagatcTTCATAAAAGAATGCACGATGAGAATCTCAGTGGCACACATTTCTGTATgttgtgtaaatattattataagacagaatttcttttaaaaaatcattacaagGACAAGCATATGTACAAGTATTTATGTAGGAAGTGTCCTGAAGTTAGCTTTGACAGattttcagCAAAAAGGCATTATATGTTAAGTCATGGTCGGAAAGGTTCAAAGAACGATGTGAATAGTgataaaggaaataaaaaaaataaaatagttgtagataaaaaaaacagtacacAAACTGacatgtatgtattaaaaaagaaaaagaagttAAAAGATCCAGACGATTTCCTGATTTACACACCAATAAAACAAGAAGAGCAATACACAATGGTGCTAGAGAGacagaaaactaaaaattacattGAATCACCATACAAGTGCCAGTACTGCTTTAAAGGTTTTAGAGAAATAGTCACTTATGAGAAACACATGCAGAAACATGATCCAGTGCATTCAGGAGAATATCAATGTGATATGTGCAAGATCCAGTGTTCCAGCACTCGGAAGATGTACAAGCACATGAACACCACtcataactttaaattctCCTGTCAGATGTGCAGCTTTGTATGCTATAGCAgAGGCCAAGCAAGATCACATTACCAATGGCAcaaaaatgttacatattcTTGTCCacaatgcaataaaatatttacGAAGCAGTCAACTCGTCTAACCCACATCCGCATCAAGCACCCGTCTACATACATATGTAACATATGTGGTCACAGCTACGTCAGCGAGGCCGGCCTGTACTGCCACAAGAAGATTGCACACAGCGCTGAGGAGATAAAGGCGCAGGAGTTGCCGACTCCCTGCGTGTCTCTGTACTGCGCGGACTGCGACGTGCAGTTCACCAACCAGAAGGCCTTCGACACGCACTTCGGCTCCTCCAACAAACACGCAGACACTAACGTATCTACAAAGCCATCCCGAAATGAAAAGCGTCCGTCAGCTCGTTCTCGCGGAAGACCGCGCGCCGCCAATGACGTACTGAACACAGGCGTCACCAGCGCGTCACACTGCGAGATATGTCAGCAATATCTACCAAACGACCTGCAGGCGAAGCGCCACTACGAGACGGAGCACCCTGGAGCCACCTACCTCAAGAGATACATGTGTGACATCTGCGGACACACTACTAAGCAATATGCGAACCTCTTAGTACACATGCGGACTCACACCCAAGAGAAGCCGTACTCGTGTCCTCACTGCCAGCGACGGTTCAGTATGGTCAGCAACAGGGACAGACATCTGGtgGTACACACAGGCGAGAAGCGCTACCAGTGCCAACACTGCAACCGGCGCTTCACTCAGAGCAGTGCGGTGAAGCTCCACATACAGACTGTGCACATGAAGATACCCTACGCACCCTGGAACAAGAAAAACCGCAAGCGACGGCTGGAGGGCCTCGCCCCCTCCCCGCCGCCCGCACCCGCACCCCCCGTACAAGTACAACATAAGGTCGTACTGGACGCAGGGAACTACCTCAGTGCGTACATCACGTATAACGAGTAA
Protein Sequence: MFDLKACVVCLKTDVQIFSMNTGQLRQQFYLIAGIKTKCEDGLPEYLCYQCKGYVKSFLRFREKCQRTYYLLQEILRTNNEITKSILDELDYNVLDIGPTLAYIDPGKGRTRYEDIKFKWVKQNRICIEPQQNIPVILCSTAENIFDVPTQTAKLTEDYVKNENNYNNISVTSSSNACVKKNEIDLFDTHIEISNNELDEVLESQESRADDADGSILDEEYGNVVAISLKEAQAVVEVNKKFAIGKFRCEICDKAYCNEKNLDLHKRMHDENLSGTHFCMLCKYYYKTEFLLKNHYKDKHMYKYLCRKCPEVSFDRFSAKRHYMLSHGRKGSKNDVNSDKGNKKNKIVVDKKNSTQTDMYVLKKKKKLKDPDDFLIYTPIKQEEQYTMVLERQKTKNYIESPYKCQYCFKGFREIVTYEKHMQKHDPVHSGEYQCDMCKIQCSSTRKMYKHMNTTHNFKFSCQMCSFVCYSRGQARSHYQWHKNVTYSCPQCNKIFTKQSTRLTHIRIKHPSTYICNICGHSYVSEAGLYCHKKIAHSAEEIKAQELPTPCVSLYCADCDVQFTNQKAFDTHFGSSNKHADTNVSTKPSRNEKRPSARSRGRPRAANDVLNTGVTSASHCEICQQYLPNDLQAKRHYETEHPGATYLKRYMCDICGHTTKQYANLLVHMRTHTQEKPYSCPHCQRRFSMVSNRDRHLVVHTGEKRYQCQHCNRRFTQSSAVKLHIQTVHMKIPYAPWNKKNRKRRLEGLAPSPPPAPAPPVQVQHKVVLDAGNYLSAYITYNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00843040;
90% Identity: iTF_00959688;
80% Identity: -