Basic Information

Insect: Mechanitis mazaeus
Gene Symbol: -
Assembly: GCA_959347395.1
Location: OY365744.1:14666413-14672414[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00036 0.032 15.2 4.1 1 23 246 268 246 268 0.98

2 12 1.4 1.2e+02 4.0 5.2 1 23 276 299 276 299 0.92

3 12 0.99 88 4.4 0.9 1 23 303 326 303 326 0.92

4 12 0.00048 0.042 14.9 2.6 1 23 402 424 402 424 0.99

5 12 0.035 3.1 9.0 5.0 1 23 432 455 432 455 0.98

6 12 0.5 44 5.4 2.9 1 23 459 481 459 481 0.97

7 12 3.3e-05 0.0029 18.5 1.6 1 23 486 509 486 509 0.98

8 12 0.069 6.1 8.1 1.2 1 23 513 536 513 536 0.89

9 12 0.12 11 7.3 0.2 2 19 554 571 553 574 0.92

10 12 2.3e-06 0.0002 22.2 1.2 1 23 649 671 649 671 0.98

11 12 0.002 0.18 12.9 1.7 1 23 677 699 677 699 0.96

12 12 4.3e-06 0.00038 21.3 2.6 1 23 705 728 705 728 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00036	0.032	15.2	4.1	1	23	246	268	246	268	0.98
2	12	1.4	1.2e+02	4.0	5.2	1	23	276	299	276	299	0.92
3	12	0.99	88	4.4	0.9	1	23	303	326	303	326	0.92
4	12	0.00048	0.042	14.9	2.6	1	23	402	424	402	424	0.99
5	12	0.035	3.1	9.0	5.0	1	23	432	455	432	455	0.98
6	12	0.5	44	5.4	2.9	1	23	459	481	459	481	0.97
7	12	3.3e-05	0.0029	18.5	1.6	1	23	486	509	486	509	0.98
8	12	0.069	6.1	8.1	1.2	1	23	513	536	513	536	0.89
9	12	0.12	11	7.3	0.2	2	19	554	571	553	574	0.92
10	12	2.3e-06	0.0002	22.2	1.2	1	23	649	671	649	671	0.98
11	12	0.002	0.18	12.9	1.7	1	23	677	699	677	699	0.96
12	12	4.3e-06	0.00038	21.3	2.6	1	23	705	728	705	728	0.98

Sequence Information

Coding Sequence: ATGTTTGACCTAAAAGCCTGTGTAGTGTGTTTGAAAACAgatgtacaaatatttagtatgaACACCGGACAACTTAGGCaacaattctatttaatagCTGGGATAAAGacAAAATGTGAAGATGGTCTACCAGAATATTTGTGTTATCAGTGTAAAGGATACGTAAAAAGCTTCCTTAGGTTTCGTGAAAAATGCCAAAgaacatattatttgttgCAAGAAATTTTACGTACAAATAATGAGATAACAAAACCAATATTAGATGAATTAGATTATAATGTTCTTAATATAGGACCCACCCTGGCTTACATAGATCCAGGTAAAGGTCGCACCCAATATGaagacataaaatttaaatgggtAAAGGAAAACCGTATTTGTATAGAACCTCAACAGAATATACCTGTGATATTATGCAGTACagcagaaaatatatttgatgttcCAACACAAGCAAAATTAACTGAAGATTATGTTAAAAAcgagaataattataataatatttctgttaCTTCAAGCAGTAATGCTTGtgttaagaaaaatgaaattgatttGTTTGATACTCACAttgaaattagtaataatgagTTAGATGAAGTTCTGGAGTCTCAAGAGAGCCGAGCAGATGATGCTGATGGATCCATTTTGGATGAGGAATACGGCAATGTTGTTGCTATTAGCTTGAAGGAGGCACAGGCCGTTGTTGAAGTGAATAAGAAGTTTGCTATTGGAAAGTTTCATTGTGAAATCTGTGATAAGGCTTactgtaatgaaaaaaatttggaTCTTCATAAAAGAATGCACGATGAGAATCTCAGTGGCACACATTTCTGTATgttgtgtaaatattattataagacagaatttcttttaaaaaatcattacaagGACAAGCATATGTACAAGTATTTATGTAGGAAGTGTCCTGAAGTTAGCTTTGACAGattttcaGCAAAAAGGCATTATATGTTAAGTCATGGTCGGAAAGGTTCAAAGAACGATGTGAGTAGTgataaaggaaataaaaaaaataaaatagttgtagataaaaaaaacagtacacAAACTGacatgtatgtattaaaaaagaaaaagaagttAAAAGATCCAGACGATTTCCTGATTTACACACCAATAAAACAAGAAGAGCAATACACAATGGTGCTAGAGAGacagaaaactaaaaattacattgaatCACCATACAAGTGCCAGTACTGCTTTAAAGGTTTTAGAGAAATAGTCACTTATGAGAAACACATGCAGAAACATGATCCAGTGCATTCAGGAGAGTATCAATGTGATATGTGCAAGATCCAGTGTTCCAGCACTCGGAAGATGTACAAGCACATGAACACCACtcataactttaaattctCCTGTCAGATGTGCAGCTTTGTATGCTATAGCAgAGGCCAAGCAAGATCACATTACCAATGGCacaaaaatgttacatattcTTGTCCacaatgcaataaaatatttacgaAGCAGTCAACTCGTCTAACCCACATCCGCATCAAGCACCCGTCTACATACATATGTAACATATGTGGTCACAGCTATGTCAGCGAGGCCGGCCTGTACTGCCACAAGAAGATTGCACACAGCGCTGAGGAGATAAAGGCGCAGGAGTTGCCGACTCCCTGCGTGTCTCTGTACTGCGCGGACTGCGACGTGCAGTTCACCAACCAGAAGGCCTTCGACACGCACTTCGGCTCCTCCAACAAACACGCAGACACTAACGTATCTACAAAGCCGTCCCGTAATGAAAAGCGTCCGTCAGCTCGTTCTCGCGGAAGACCGCGCGCCGCCAATGACGTACTGAACACAGGCGTCACCAGCGCATCACACTGCGAGATATGTCAGCAATATCTACCAAACGACCTGCAGGCGAAGCGCCACTACGAGACGGAGCACCCTGGAGCCACCTACCTCAAGAGATACATGTGTGACATCTGCGGACACACTACTAAGCAATATGCGAACCTCTTAGTACACATGCGGACTCACACCCAAGAGAAGCCGTACTCGTGTCCTCACTGCCAGCGACGGTTCAGTATGGTCAGCAACAGGGATAGACATCTGGtgGTACACACGGGCGAGAAGCGCTACCAGTGCCAACACTGCAACCGGCGCTTCACTCAGAGCAGTGCGGTGAAACTTCACATACAGACTGTGCACATGAAGATACCCTACGCACCCTGGAACAAGAAAAACCGCAAGCGACGGCTGGAGGGCCTCGCCCCCTCCCCGCCGCCCGCACCCGCACCCCCCGTACAAGTACAACATAAGGTCGTACTGGACGCAGGGAACTACCTCAGTGCGTACATCACGTATAACGAGTAA
Protein Sequence: MFDLKACVVCLKTDVQIFSMNTGQLRQQFYLIAGIKTKCEDGLPEYLCYQCKGYVKSFLRFREKCQRTYYLLQEILRTNNEITKPILDELDYNVLNIGPTLAYIDPGKGRTQYEDIKFKWVKENRICIEPQQNIPVILCSTAENIFDVPTQAKLTEDYVKNENNYNNISVTSSSNACVKKNEIDLFDTHIEISNNELDEVLESQESRADDADGSILDEEYGNVVAISLKEAQAVVEVNKKFAIGKFHCEICDKAYCNEKNLDLHKRMHDENLSGTHFCMLCKYYYKTEFLLKNHYKDKHMYKYLCRKCPEVSFDRFSAKRHYMLSHGRKGSKNDVSSDKGNKKNKIVVDKKNSTQTDMYVLKKKKKLKDPDDFLIYTPIKQEEQYTMVLERQKTKNYIESPYKCQYCFKGFREIVTYEKHMQKHDPVHSGEYQCDMCKIQCSSTRKMYKHMNTTHNFKFSCQMCSFVCYSRGQARSHYQWHKNVTYSCPQCNKIFTKQSTRLTHIRIKHPSTYICNICGHSYVSEAGLYCHKKIAHSAEEIKAQELPTPCVSLYCADCDVQFTNQKAFDTHFGSSNKHADTNVSTKPSRNEKRPSARSRGRPRAANDVLNTGVTSASHCEICQQYLPNDLQAKRHYETEHPGATYLKRYMCDICGHTTKQYANLLVHMRTHTQEKPYSCPHCQRRFSMVSNRDRHLVVHTGEKRYQCQHCNRRFTQSSAVKLHIQTVHMKIPYAPWNKKNRKRRLEGLAPSPPPAPAPPVQVQHKVVLDAGNYLSAYITYNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00843040;
90% Identity: iTF_00960435;
80% Identity: -