Basic Information

Insect: Mechanitis messenoides
Gene Symbol: ttk
Assembly: GCA_959347415.1
Location: OY365760.1:5992823-5998695[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-16 1.4e-13 50.9 0.0 2 42 316 357 315 360 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-16	1.4e-13	50.9	0.0	2	42	316	357	315	360	0.95

Sequence Information

Coding Sequence: atgTCTCAACAATACAGTCTTCGGTGGAATAACCACCAACCAAACTTCATTTCCATGTTTGGTAATCTTCTTGCCACCAAAGATCTAGTGGATGTAACCTTAGCAGCTGAAGGACAACATTTAGTTGCACACAAAGTTGTTCTGTCAGCATGTAGCACGTATTTTCATtctCTATTTGTGGACAATCCAACTCACCATCCTATAGTTATTCTTAAGGATGTTACATTTAATGATTTACGCACAATGGTTGACTTTATGTATTATGGTGAAGTTAATGTCACAGAACTGCAGTTAGCacagGTATTGGAGAcagcaaaaatattaaaaataaaggggTTAACAGAAATGCCTGATTCTACTTCCTTAACAAGATCTCAAGGCGTATGTACAGACTTTCCAACAGAAACTTCAAGTGATACTCAACGTCCTTCAGTGTCGCCATCATCCCCTATCAGGAGAAAGAGGCAAAGAAAGAGTTCTTCTGGATCATTGGCAAATCCTGAAGATCTCATGCAGAATGTTGAAATGATGCGTGAGGCAGTGACTCTAAGCAGTCTAAACATACAGAAGAAACGGGACATGGACGACAGAATTGAAACAGCTCAACAGACAGACGATGCctcttcaataaatattgatcaCCTTGCAATAGACACAAATGCTGTTGGAATGTCACAAgGAGCCCAGTGGAATATGATGGAGCATCCGTATCCTCGGTATACTAATGCTGGTATTAGCGGTGGAGGTTTGCAGCCGGAACAGGcgatgtatgtaaataatgtgATACATCCGCACGGCGACGAAATGAGTCACTACGCACATGCCCTCGGTGCCGCGGGCCCAATGCCGGGACCTAGTTCGCTGCCAGGGATGAATGAACAAGTAAGCCAGGCTCACGGCGGAGTGTTACCCGCCAAGAGACGGCGAACCACGAATCCTCAAGGTGAAGAAAACTTTCAAAAGGCTCTAGAAGCAGTACGCGTGGGCGGTATCGGTTTCTGTAAGGCCGCTCGAATGTTTGGTGTAAATAATAGAACACTGTGGCTCGAATATAAGAAAAAGGGTTATCCGAACAACAGACCTAGTATCAAGAATCGTATCAAGAGAGAACACCTCACACCGCCTCCCGAAATAAAAGAAGATCCTCCTCACCTCGAACAACAGATGGCTCTTCTCTGTCATCCGCCTCCGGCGGGGTGGCACGGCGGCGAGAGCGCGCTGCCGGCCCCGCCGCCGCCGGGCCCCGCCCCGCACATGCACTACGACGTCTACATGCACGTACCCCTGTAA
Protein Sequence: MSQQYSLRWNNHQPNFISMFGNLLATKDLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFVDNPTHHPIVILKDVTFNDLRTMVDFMYYGEVNVTELQLAQVLETAKILKIKGLTEMPDSTSLTRSQGVCTDFPTETSSDTQRPSVSPSSPIRRKRQRKSSSGSLANPEDLMQNVEMMREAVTLSSLNIQKKRDMDDRIETAQQTDDASSINIDHLAIDTNAVGMSQGAQWNMMEHPYPRYTNAGISGGGLQPEQAMYVNNVIHPHGDEMSHYAHALGAAGPMPGPSSLPGMNEQVSQAHGGVLPAKRRRTTNPQGEENFQKALEAVRVGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKNRIKREHLTPPPEIKEDPPHLEQQMALLCHPPPAGWHGGESALPAPPPPGPAPHMHYDVYMHVPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00958759; iTF_00959341; iTF_00958609; iTF_00960273; iTF_00959514; iTF_00420645; iTF_00842791; iTF_00419082; iTF_00419850; iTF_00461482; iTF_00418893; iTF_01033648; iTF_00419697; iTF_00842578; iTF_00420469; iTF_00461686; iTF_01034714; iTF_01033851; iTF_01034460; iTF_00421277; iTF_00421471;
90% Identity: iTF_00958759; iTF_00959341; iTF_00958609; iTF_00960273; iTF_00959514; iTF_00420645; iTF_00420469; iTF_00842791; iTF_00419082; iTF_00419850; iTF_00461482; iTF_00418893; iTF_01033648; iTF_00419697; iTF_00842578; iTF_00461686; iTF_01034714; iTF_01033851; iTF_01034460; iTF_00421277; iTF_00421471;
80% Identity: iTF_00960273;