Dere009809.1
Basic Information
- Insect
- Danaus eresimus
- Gene Symbol
- ttk
- Assembly
- GCA_018231745.1
- Location
- DVQP01006665.1:3394-6659[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-17 1.8e-13 50.6 0.0 2 42 317 358 316 361 0.95
Sequence Information
- Coding Sequence
- ATGTCTCAACAGTACAGTCTTCGGTGGAATAACCACCAGCCAAACTTCATTTCAATGTTTGGTAATTTACTCGCTACCAAAGATCTTGTGGATGTGACTTTGGCAGCTGAAGGCCAACACTTGGTTGCACACAAAGTTGTCCTTTCAGCATGTAGTACATACTTTCATtCACTTTTTGTGGATAACCCAACTCACCATCCGATAGTTATTCTTAAAGACATCACATTTAATGACTTGCGCACAATGGtagattttatgtattatggTGAAGTGAATGTCACAGAGCAGCAACTAGCACAGgttTTGGAAacagcaaaaatattaaaaataaaggggCTGACAGAGATGCCAGACTCTACTTCCTTAACTAGATCTCAGGGAATTCCCACAGATTTCCCAACAACAGAAACTTCAAGTGATACACAAAGGCCCTCAGTTTCACCCTCATCACCTATTAGAAAGAAAAGGCAGAGAAAGAGTTCTTCTGGCTCACTGGCAAATCCTGAAGATCTCATGCAGAATGTTGATATGATGCGTGATGCGGTAACATTAAGCAGCCTAAACATACAAAAGAAACGGGAAATGGATGAGAGAATTGAAACTGCACAACAGACAGAGGATGCATCAGCAATAAACATTGATCAACTTGCAATAGACACAAATGCTGTTGGGATGTCTCAAgGAGCCCAGTGGAATATGATGGAGCATCCATATCCCCGGTATACGAACGCGGGTATCGGCGGTGGCGGTTTACAACCGGAACAGGCCATGTATGTGAATAACGTGATACATCAACATGGAGACGACATGAGCCACTACGGACACACGCTGGGATCTACAGGGCCGGTGCCGGGACCCAGTGTACTCCAAGGGATGAATGATCAAGTTGGTCAGGCTCACAGTTCTGGTATGCCTGTAAAGAGACGGCGCACTACTAACCCTCAGGCCgaagaaaattttcaaaaagcCCTGGAAGCGGTCCGCGTAGGTGGGATTGGTTTCTGCAAAGCCGCTCGAATGTTTGGTGTAAATAATCGAACATTGTGGCTCGAATATAAAAAGAAGGGTTATCCGAACAACAGACCAAGTATCAAGAATCGCATAAAGAGAGAACATATCACACCACCTCCTGAAATAAAAGAAGATCCTCCACAACTGGAACAGCAGATGGCACTTCTATGTCAACCGCCTCCCGTTCCAGTCAGCTTTATTGATCCGCGACCGATGGATTTCCCACAGATCAACAGTTCTTCCTTgagcattataaataatgttaatttcacGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFGNLLATKDLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFVDNPTHHPIVILKDITFNDLRTMVDFMYYGEVNVTEQQLAQVLETAKILKIKGLTEMPDSTSLTRSQGIPTDFPTTETSSDTQRPSVSPSSPIRKKRQRKSSSGSLANPEDLMQNVDMMRDAVTLSSLNIQKKREMDERIETAQQTEDASAINIDQLAIDTNAVGMSQGAQWNMMEHPYPRYTNAGIGGGGLQPEQAMYVNNVIHQHGDDMSHYGHTLGSTGPVPGPSVLQGMNDQVGQAHSSGMPVKRRRTTNPQAEENFQKALEAVRVGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKNRIKREHITPPPEIKEDPPQLEQQMALLCQPPPVPVSFIDPRPMDFPQINSSSLSIINNVNFTMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00960097;
- 90% Identity
- iTF_00960097;
- 80% Identity
- iTF_00419850;