Mmes005722.1
Basic Information
- Insect
- Mechanitis messenoides
- Gene Symbol
- -
- Assembly
- GCA_959347415.1
- Location
- OY365761.1:8667894-8673533[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.9e-12 1.2e-08 35.1 0.0 4 39 166 202 163 206 0.89 2 4 3.2e-11 4.3e-08 33.4 0.2 2 39 218 255 217 258 0.91 3 4 1.8e-16 2.4e-13 50.2 0.2 2 45 273 317 272 317 0.97 4 4 2.3e-18 3.1e-15 56.2 0.0 1 42 324 366 324 369 0.95
Sequence Information
- Coding Sequence
- ATGCCAGGAACAGAAAGATTTCACGTCAAAAGCGAGCCACAGTCTGATGAAGAGGATTTTAATTCACAATACGTAAAAGCATACTTTAAAAATCAGctaACTGAATACCAAcccattaaaatagaaaatactcGAGGAGACGATAATGCCTCTTCCAACCTGTTACATCAGCTGCAGGGCTCTCTGGAGGAGCTGGCACCAGCGGGCCCGGCCGCCACGCCCGTGAGCGCGCCGTTGCCGGCCCCGCGGGACACCTCGCTCGCCACGCTGCAGCCCGCCCACCACCACGAGGGAACATCATTAATCGATAGACACATACAAATGATGAGTGCTAACGAGGTAGCGGATTCTTCAGAATTCGTGCCCCTCATGGCTATTAAGGATGAGCCAAGTTCAGAGGGAGAACAGCCACATCTAAGCGGCGACGACACGAGCGACTCCAACGGTCCGACGACGGAGACCAGCCGCGGCGGTCCCAAGACCTGGACGCAGCAGGATATGGATAAAGCGTTGGAGGCGCTCCGGAAACATAATATGAGTCTCACTAAGGCTTCCGCGACATACGGTATTCCGTCCACAACTCTCTGGCAGCGAGCTCATCGCCTCGGCATCGACACGCCCAAGAAGGAGGGCAGTTCCAAATCCTGGAACGAGGCGGATCTACGTGGAGCACTGCATGCGCTTCGGGCCGGCGCCATATCGGCCAACAAAGCCAGCAAGGCCTACGGTATCCCGAGCAGCACGTTGTACAAGATCGCCCGTCGCGAGGGCATCCGCCTCGCCGCGCCTTTCAACGCCGCGCCGACCGCCTGGCGCCGCGACGACCTGGCGCGCGCGCTCGCCGCCATACGGGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCCACCTACGGCATACCCACCGGAACTCTGTATGGAAGGTGTAAAAGAGAAGGCATAGAGCTGTCCCGCTCTAATCCCACGCCGTGGTCTGAAGACGCCATGGGTGAAGCTTTAGAAGCTGTTAGggTGGGTCAAATGTCCATCAATCAAGCTGCCATACACTACAATCTTCCATATTCGTCACTTTACGGGCGTTTTAAGCGCTGCAAATACCAGCCACTGCAGACCCAGCCACAACAAGAGCTACCAATTTACGAAAATGAAAATCAACAACAAGACGTTTTCTACCAACGCACACCTACACATACAAATCTACACAACCCATACATACACGAAATGAGCGACGTagatacatacacacatttgTATTACTCGCATTGTAATGTTACCAGCTGA
- Protein Sequence
- MPGTERFHVKSEPQSDEEDFNSQYVKAYFKNQLTEYQPIKIENTRGDDNASSNLLHQLQGSLEELAPAGPAATPVSAPLPAPRDTSLATLQPAHHHEGTSLIDRHIQMMSANEVADSSEFVPLMAIKDEPSSEGEQPHLSGDDTSDSNGPTTETSRGGPKTWTQQDMDKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSSKSWNEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRDDLARALAAIRAGAASVQRAAATYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQPLQTQPQQELPIYENENQQQDVFYQRTPTHTNLHNPYIHEMSDVDTYTHLYYSHCNVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01033644;
- 90% Identity
- iTF_01033644;
- 80% Identity
- -