Mmaz021623.2
Basic Information
- Insect
- Mechanitis mazaeus
- Gene Symbol
- ZNF296_1
- Assembly
- GCA_959347395.1
- Location
- OY365756.1:3541220-3547278[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.14 12 7.1 0.3 3 20 124 141 122 144 0.91 2 13 0.012 1.1 10.4 2.5 1 23 267 289 267 289 0.99 3 13 0.00022 0.02 15.9 0.5 1 23 295 318 295 318 0.96 4 13 0.094 8.3 7.7 6.3 1 23 323 346 323 346 0.93 5 13 1.9e-05 0.0016 19.3 0.6 2 23 476 497 475 497 0.97 6 13 5.5e-05 0.0049 17.8 2.1 1 23 503 525 503 525 0.99 7 13 0.15 13 7.0 1.9 1 23 649 671 649 671 0.96 8 13 0.0014 0.13 13.4 0.8 1 23 677 699 677 699 0.98 9 13 0.0063 0.56 11.3 3.2 1 23 708 730 708 730 0.98 10 13 0.00044 0.039 15.0 0.8 2 23 775 796 775 796 0.97 11 13 0.054 4.8 8.4 5.3 1 23 813 835 813 835 0.95 12 13 2.2e-06 0.0002 22.2 0.7 1 23 841 863 841 863 0.98 13 13 4.8e-07 4.2e-05 24.3 3.1 1 23 869 892 869 892 0.98
Sequence Information
- Coding Sequence
- ATGAATGAAGATATGACATCGGACGTGGATCCGTTGAGTACGTATTGTTTGAGCTATCCGTCTCTCGACAGTTATTCCCAGTTACCTCTAGATTATCAAAGTCCTGTTAAACAGGAGAATTTTTTGaactacaatttttatactGCCCCTATTGTGGAAACAGCACCTGTAAATAATGATCTCAATCTAGTTGATAATACTTGCGATAAACAACCGAGTGCGGCTATTAATAATGAAGCAAATATCACAAACAATACACCACTGGTAGATTTTAATCCATGTTTGCCGACgagaagaagaaaaataaaaaaggagaAAAGTGCTTATTTCTCTGAGAAAATTATGGATAAAGACTTTCCATTCTATGGTTGTGCagtttgtaatatatgttttaagacACTACAAGAGTTAGATTCACATGTGCCTATTCACAAAGATAGAATTACGAGTTatgatttaagaataaaaaatcagATTAAAAAGAGGAAATTACAGAAAGAGatgaaaaagaataaaaaggcaaaaaagaatattaaacagGAGATGTCTatagaaattgaaattaaaccaGAGGATGGGTATATTGGTAGTGAAAAGGCATCAGATGTTGTGAGCACGGAATCCGACAACCagagtttaaaagaaaacaatagcAACGGAGAATGTAGCAATATTAACAatcaaaacttaattattaaagataaagagTCTGATAAAACAAATCAACTATTGGAGAAAAATGCTAGTTCTGACGATGTTAACACTAAAAAGCAAGAAAGGATGAATTTGCAGAAGATATATAAGTGCTTTGCAtgtcaaaaacaatttatgcTCAGCTATTACTTGAAGCTGCATGTGCGATCACATACCGACGAGAAGCCCTATACCTGCGCCCAGTGTGGTCAGGCCTTTATCACTGCCAGTAAGCTGGGCCGCCACAACAAGAGGTACCACCTCGCAATAAGACATCAGTGCAGGATATGCTATCGATTCTTCTCGAGGTTTGAGTTCCTCACTCGACACTTTGATAAAAAACATCTGGATGAGAAGTTGGAAGGAGAACCTTATGATTATAATGCAATACTgccatatttaaaagaattggaAACTGAATTAAAAGAGAAGGCTGAATCAGAAAAAGCGAAAGCTAAAATAGAAGAACTATGGACAGAAGAACTGCCCATAGACAAGAAAGATTATATCAAAGAGGAGATGCCCATTGAGGAGGTGAAGGTGCATATGGATGtggaaattaaatttgaaaccgagGAGGAGGAAATCAAGGAGGAAGGAGGACGGAGTAATGGGGAGGAGGGAGTCAGTGACGGGGAGCCCGATAAGGAGGAAGTTAAAGATgagaaTTCGGACTCCGATTACTTCCCGTCATCGACGTGGGCGGCGCCACCGGCCGAAGCCCCGGGTCTCCGCTGTGAGGCGTGCGGTAAGACCGTCAGCTCGAGGAGCTACATGCGAATACACATGCGGACACACACCGGAGAAAGACCATACAAGTGTTATATCTGCGGCACCGGATTCATCACCAGCAGCAAGATGCACCGACATGTGCTCACTCACCCGGAGAGCTGGGATGaaaatggaGTGAAACAagagaataaaacaaaaggaGAGAAAGAGATAAAGtcagagaaagagagagatgACGCAGACGACGTTAATGATAAGAAAAAaGTGAAGATGAAAGCAGGTTTAGCGAAATTTGCGAAGAAACCACGAAATAAAGAGCAGAAGAGAGTATACCAGAAACGACCTCATGCCTGTGAGTTCTGCCAAAAGAGATTCCTCCATCTGGAGACACTGCAGGTGCACAAGAAGTGTCACTCGGGCGAGCAGGTGGTACACGCGTGTCACTACTGCCTGCTGGAGCTGCCCGACGCGGCTGCGCGCGAGGAGCACGAGAGGGGACACGCGGGAGGGGCGAGGCCCTACCTGTGTACACTGTGCGGGAACACCTACCAGAAGAGGGAGAGTATGATGTACCACCGCAAAAGCCACACGCACCCCAAGTCGTTCCGCTGTCCGTCGTGTCCCGCCTCGTTCTCTGCGGCCTGCAAGCTGTCTCGCCACGCGCGCTCTCACGCGCCGGCGGCCTACTCGCTGCGCTACGAGTGTCCTGTCTGCGCACACGTCTTCAACACGCACTACCACGCCAGGATGCACCTCGCCACACACCAGCGGGAGGGGCTAATACAAGAAAATAACAGAAATGAAATACTGGCGATGGTGCTTCAGAACGCGCGGAAGATCCCTAAAACACCAAATGCGGCGGCAGCCGATCTCATTCCTCCAGACGAGCGCAGCCGCGTGTGCAACATATGCGGGGAGGTGTTCCAGCATTTCTATTTCTTAGAGGAACATCTCAAGAGCCACGGAACCAAAATAGCGATAGAAGACAGCGAGAAGGAAGAAGAAAAGAAACATATATGCTCCGTGTGCAATAAAGGCTTCAAATTGCACTATTATCTTAAGTTGCACAGTTTCACGCATACAAAAGAGAAGCCGTTCATTTGTCAGCAATGTGGGAAGGGCTTCATAACCAGGGGCAAGTTGAAACGACATTTAGAAACACACACGGGTCTGAAGAAATACCAGTGTCATATTTGCTATAAATTCTTTACGAGACCGAGTTATTTAAGAATTCATGTGAGAACCATTCACGGGACACAAGACTATAATTTTAGGCTCGAAAAACAGTACGGGTTGAGTTCGTTACCTGTTATGAggaatgataatttataa
- Protein Sequence
- MNEDMTSDVDPLSTYCLSYPSLDSYSQLPLDYQSPVKQENFLNYNFYTAPIVETAPVNNDLNLVDNTCDKQPSAAINNEANITNNTPLVDFNPCLPTRRRKIKKEKSAYFSEKIMDKDFPFYGCAVCNICFKTLQELDSHVPIHKDRITSYDLRIKNQIKKRKLQKEMKKNKKAKKNIKQEMSIEIEIKPEDGYIGSEKASDVVSTESDNQSLKENNSNGECSNINNQNLIIKDKESDKTNQLLEKNASSDDVNTKKQERMNLQKIYKCFACQKQFMLSYYLKLHVRSHTDEKPYTCAQCGQAFITASKLGRHNKRYHLAIRHQCRICYRFFSRFEFLTRHFDKKHLDEKLEGEPYDYNAILPYLKELETELKEKAESEKAKAKIEELWTEELPIDKKDYIKEEMPIEEVKVHMDVEIKFETEEEEIKEEGGRSNGEEGVSDGEPDKEEVKDENSDSDYFPSSTWAAPPAEAPGLRCEACGKTVSSRSYMRIHMRTHTGERPYKCYICGTGFITSSKMHRHVLTHPESWDENGVKQENKTKGEKEIKSEKERDDADDVNDKKKVKMKAGLAKFAKKPRNKEQKRVYQKRPHACEFCQKRFLHLETLQVHKKCHSGEQVVHACHYCLLELPDAAAREEHERGHAGGARPYLCTLCGNTYQKRESMMYHRKSHTHPKSFRCPSCPASFSAACKLSRHARSHAPAAYSLRYECPVCAHVFNTHYHARMHLATHQREGLIQENNRNEILAMVLQNARKIPKTPNAAAADLIPPDERSRVCNICGEVFQHFYFLEEHLKSHGTKIAIEDSEKEEEKKHICSVCNKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRLEKQYGLSSLPVMRNDNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461799;
- 90% Identity
- iTF_00461799;
- 80% Identity
- -