Mmaz021352.1
Basic Information
- Insect
- Mechanitis mazaeus
- Gene Symbol
- -
- Assembly
- GCA_959347395.1
- Location
- OY365756.1:1724737-1728082[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.63 55 5.1 2.9 10 23 2 16 1 16 0.94 2 22 5.7e-06 0.00051 20.9 2.7 1 23 22 44 22 44 0.97 3 22 0.27 24 6.2 0.6 1 23 111 134 111 134 0.92 4 22 0.17 15 6.8 0.0 2 23 161 183 160 183 0.96 5 22 0.0023 0.2 12.7 3.1 2 23 206 227 205 227 0.97 6 22 0.3 27 6.1 0.6 1 17 231 247 231 253 0.86 7 22 0.016 1.4 10.0 0.8 1 23 258 281 258 281 0.96 8 22 0.3 27 6.1 4.8 1 23 288 311 288 311 0.94 9 22 0.00087 0.077 14.1 1.1 2 23 319 341 318 341 0.96 10 22 0.031 2.8 9.2 3.6 1 23 347 369 347 369 0.96 11 22 6.3e-05 0.0056 17.6 1.8 1 23 375 398 375 398 0.98 12 22 4.4 3.9e+02 2.4 0.5 1 9 404 412 404 415 0.86 13 22 0.12 11 7.3 0.2 3 23 469 490 467 490 0.89 14 22 0.021 1.9 9.7 1.0 2 23 516 538 515 538 0.96 15 22 0.0011 0.097 13.7 0.3 2 23 561 582 560 582 0.97 16 22 0.00058 0.051 14.6 0.5 1 23 586 608 586 608 0.96 17 22 1.4e-05 0.0013 19.7 0.5 1 23 613 636 613 636 0.98 18 22 0.96 85 4.5 0.1 2 23 644 666 643 666 0.87 19 22 0.00024 0.022 15.8 1.7 2 23 674 696 673 696 0.96 20 22 4.2e-06 0.00037 21.4 1.3 2 23 703 724 702 724 0.98 21 22 8.9e-06 0.00078 20.3 1.5 1 23 730 752 730 752 0.98 22 22 0.0002 0.018 16.1 3.5 1 23 758 781 758 781 0.96
Sequence Information
- Coding Sequence
- atgtttgttcatCAACATGCATTACAGATACACATGAGACGATATCACCTGGTCGAAAGACCTCATAAGTGTTCTGAATGCGATAAAGGTTTCTTCTCTTCCTCTGAGCTCAGGACTCATATGGTGAAGCACACCGGACAGCGTGAATATAAATGTGTACTTCGTAAAACCttcaaaaaggaaaaaatacataaagacAAGGACTTTGATCGGAAAGAAGGACTACCACGGGGTAGACAAGGAGAATTATTAGATAAACATCGCACCAATGTTCGCGAAATCATACAATGGTCAAATGCAACGCCTATAAGATGTCGCGGAGGCATCGGCTATGCATGTTGCTTTTGTTCAGATCAGTTTCCAGATCCGGCTGATTTAAAAACGCATACTATTGAAACACACGACGACAGTACGAAGTCTAACTTCATGAAAGGAAGAGACATGTATGGATATTTCGTAAAACTAGATATTACCGGTTTACAATGCAACCTGTGTGGACTAGATATTGACACATTAGAACAAGTAATGGAGCACTTAAGAGTATCCCACGATAAAAACATCAGCATGGATATTTCAAACCATATTTTACCATTTAAATTCGACAGCGAGAATTTGAGGTGCTTCATGTgtcataacatatttaataggtTCAAGGCGTTACAAGAACACATGAATACTCACTATAGGAACTATATTTGTGAAGTTTGTGACGCTGGGTTTGTGAACCGTCATCTTCTGTTATGTCACAATGAAGGTCACAAAACCGGAACATTTGCGTGTGACCAATGTCCCAAAATCTTTGACACATTGAGGAAGAAAAAGTTACACGAACGAAAAATTCACAACGGTTTGAACATGCCTCATAAATGTGGATACTGCAATGAGAGGTTCAAGGAGAATTGCTACAAAAATGAGCATCTTGCCAAAGTCCACGGCATAGTCGGTCCATTGATAAAATGTCAAGCCTGCGAAAAGTCCTTTACGTCGCAGCAGACTTGGCTGTTGCATATGAAGAAGTACCACTTAATGCAGAGGCAGCATAAATGTACTAGATGTGAAATGGAATTCTTTTCGAAGAGGGAATTAACTGATCACACGGTGAAGCATACAGGAACCAGAGAATACAGGTGTGAAATGTGCTTCAAATCATATGGAAGGTTAAAAACTTTGAAGGAACACATTCGGCGTTTGCATCCAGAAGACCGAAACTATAAATGCGTCCATTGCGGTATGCGAACCATAAAAATCGAAAGGAAAATGGACGTACCTCGCGTGCAGTTGAAGTTAGTTAGCCGAAAACATGGCAAGCTTTCAGACAACAAGAAAAACCAAGAAAATCTTATGCAAATCTTGCTCAATTCTAACGCAAACCCCATTAGAAATAAAGATAGCCTTGGCTACGGTTGCGCGTTTTGTTCTGAACAATTTATTGAAcctaaaaatctaaaaaatcacTTTCTAGACGAACACAAAAGTGACaggcttataaaaataatgtccaGCAAACTATTTGAACATGTAGTTAAACTGGATATAACATATCTACATTGTACAATGTGCAACCAAAATATGTCTCAGCTGGATGAATTGATGGTCCACTTAAAAACAGAACACAGTAAAGAATTACATGttgatattaaaagttcaatcGTACCTTTCAGATTTGATTCACCTCAATTGCAATGCGCCGTttgtaaaatagaatattcaaattttaaactctTACAAGAACATATGAATTCCCATTTTGGTAATCATATCTGTGCGATGTGTGGAGGAGGTTTTGTGACTGAACGTCTTTTGACAACACACATGAAGAGACATAAAACTGGAGAATATAAATGTGAAGATTGTGACAAAGTTTTTGataatgaagaaaaaataaaggagCATCAGAAGCGAGCTCATCTCGGTCATAATAAAAGGAATAAATGTTTGATATGTGAGGAAAGGTTTGTGGATTACTGGAAGAAAGTTGAACACATGGTCGAGGTACACGGGGCGCCACCTGTTGTGTTGAAATGTCAAGCGTGTGAACGATCTTTTCGAAACCAAAGAGCATTATCGAGGCACACGAAAAAAGATCATTTAatggaaagaaaaaataaatgtccaGAATGTGAAATGAGGTTCTTTAGCAAAAGCAGTTTACAGCGACATATGGCGAAGCATACAGGAATACGACAGTTTACGTGcgatgtttgttttaaatcttatgGTAGGAAGAATACTTTAAGGGAACATATGAGAATTCATGCAGACGATAGAAGATTTGCGTGTGTGCACTGTGGACAGgcttttgtacaaaaatgtaGTTGGCGCAGTCATATGCGTTCGAAACACGGAGATGACGTTTAG
- Protein Sequence
- MFVHQHALQIHMRRYHLVERPHKCSECDKGFFSSSELRTHMVKHTGQREYKCVLRKTFKKEKIHKDKDFDRKEGLPRGRQGELLDKHRTNVREIIQWSNATPIRCRGGIGYACCFCSDQFPDPADLKTHTIETHDDSTKSNFMKGRDMYGYFVKLDITGLQCNLCGLDIDTLEQVMEHLRVSHDKNISMDISNHILPFKFDSENLRCFMCHNIFNRFKALQEHMNTHYRNYICEVCDAGFVNRHLLLCHNEGHKTGTFACDQCPKIFDTLRKKKLHERKIHNGLNMPHKCGYCNERFKENCYKNEHLAKVHGIVGPLIKCQACEKSFTSQQTWLLHMKKYHLMQRQHKCTRCEMEFFSKRELTDHTVKHTGTREYRCEMCFKSYGRLKTLKEHIRRLHPEDRNYKCVHCGMRTIKIERKMDVPRVQLKLVSRKHGKLSDNKKNQENLMQILLNSNANPIRNKDSLGYGCAFCSEQFIEPKNLKNHFLDEHKSDRLIKIMSSKLFEHVVKLDITYLHCTMCNQNMSQLDELMVHLKTEHSKELHVDIKSSIVPFRFDSPQLQCAVCKIEYSNFKLLQEHMNSHFGNHICAMCGGGFVTERLLTTHMKRHKTGEYKCEDCDKVFDNEEKIKEHQKRAHLGHNKRNKCLICEERFVDYWKKVEHMVEVHGAPPVVLKCQACERSFRNQRALSRHTKKDHLMERKNKCPECEMRFFSKSSLQRHMAKHTGIRQFTCDVCFKSYGRKNTLREHMRIHADDRRFACVHCGQAFVQKCSWRSHMRSKHGDDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461752;
- 90% Identity
- iTF_00461752;
- 80% Identity
- -