Basic Information

Insect: Mechanitis mazaeus
Gene Symbol: ham_2
Assembly: GCA_959347395.1
Location: OY365747.1:12551016-12567017[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.016 55 4.5 0.0 11 43 111 142 103 143 0.81

2 8 0.016 52 4.5 3.9 19 43 151 201 141 202 0.56

3 8 0.085 2.9e+02 2.2 0.2 19 38 209 225 206 230 0.87

4 8 0.72 2.4e+03 -0.8 4.0 4 38 223 253 220 258 0.77

5 8 0.39 1.3e+03 0.0 4.3 5 28 252 275 241 282 0.81

6 8 7.8e-06 0.026 15.1 0.1 16 41 686 708 667 710 0.77

7 8 1.1e-05 0.037 14.6 1.6 17 44 715 739 710 739 0.89

8 8 0.22 7.5e+02 0.8 0.7 18 41 745 765 740 766 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.016	55	4.5	0.0	11	43	111	142	103	143	0.81
2	8	0.016	52	4.5	3.9	19	43	151	201	141	202	0.56
3	8	0.085	2.9e+02	2.2	0.2	19	38	209	225	206	230	0.87
4	8	0.72	2.4e+03	-0.8	4.0	4	38	223	253	220	258	0.77
5	8	0.39	1.3e+03	0.0	4.3	5	28	252	275	241	282	0.81
6	8	7.8e-06	0.026	15.1	0.1	16	41	686	708	667	710	0.77
7	8	1.1e-05	0.037	14.6	1.6	17	44	715	739	710	739	0.89
8	8	0.22	7.5e+02	0.8	0.7	18	41	745	765	740	766	0.81

Sequence Information

Coding Sequence: ATGAGTGATGACCAACATCTGCTGCTGGGCTGGACCCTCGTAGGGCTGGACACGTTTTATCGTGTTAATGGCAAAAACGGAGTATGGTCTTGGCTGGATGGAACATCAGAGAAGTCAAACTGGTTCATACTTGTTCGTTGCACCTCCTCGCCCAATGAAGTTAATTTACAACATGAGAAGTTTGCAGGACAAatttGGTACAAGTTAACACGTGAAGTGAGGTCCGGGCAGGAGTTGCTGGTGGCTCCTTGGACGTCGGTGCCACTGCAGGATTCGCTCACAGCTACAGGTAGAGAAAGTGCAGCCAGTCACTCACATCCCCAGCCAGAGGAAGAAGATAGAGAGGATACGAAGCCACGCTGTTTCTTCTGTGAGGAGCCATTCCCCAACATTGATGCACTTGATCGTCACTTGATCCAAGCACACGCACAACCAGCGTCAGCGTATCATTGCGAGTACTGCAATAGAGCGTACAGCTATCGAGCGCTCCTGCTCAGGCATCGCGCTTTGAGCCACACGGATATTAAGAAATACCCCTGCGAGAATTGCCCTAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATCCGCGCTCAGCACGTCGGCGCGCGCAGCCACGCCTGCCCCGAGTGCGGTAAAACCTTCGCCACCAGCTCGGGACTCAAACAGCACACACATATTCACTCCAGCGTCAAGCCTTTTCAGTGTGAAGTTTGCTTCAAGGCATATACCCAGTTTTCAAATTTGTGTCGACACAAACGGATGCACGTGGCGTGCAAGACCATGTCAGGGTGTAGAAAATGTGGGCAATCATTTTCTTCTTACGCATCTCTTGCTAAGCACAAGAGATTTTGTGAAACTGCTACAACACGAAACGTTAATCTTCGAGGTCAGTTAGGACAAGGCTTACAACAGATACCGCCTCTACCAAATAGTATGAATAATCCCAATAATACTAATCCTTTCCCTATGTATAGGGGATCAGCGCTACCCTTACCATACAATACATTTGCACATTATCCAGCTTTCATTTCTGCGGCGGCAGCAGCTGCTTGCCCACCAGATTTTTTCAACCCTCTTCTTTTCAATGTACAAGGCGCGAGATTGGCTATGGAACACGATTTAGCACTTAACGCTAGTTTAATGGCAAAACAACAACAGGAAGGAGAAAGATCAGTAAAGAGAGAGACAGAAAGCATAGATAGTTTGACTTCTGTAGATTTATTGCATAAAGGAAAGGAGATAGTTTGTGATGATAAAGATATGGATGTAGATAGAGTTACACCAAAACCACAGGATCATTACGTAAAACAATCACCACCATCGGCTGAAGAGGCTACGTCAAAACAACGTCCATTACCAGTAATGCCTATGTCAACTACGGTTGGTCCTTTCGACTTTTCAAGAAACGAAATGAAGCCAAACTCTATATATGACTTTccgatgaaaataaataatagcgaAACGTTAGAAAATAAGTCAGTTTTACAGGAGCCTAAAGAtctgtcaaaaaatattactgatgatattgaaaaaagaGATAGATATTCTAATATGGaggaagataaaataaaagaacagaATGACCAACCACTTGACTTATCTGTTTCTCGAAAACCACGTGACAAGGAATCAGACGTAGAAAACGATGACAATTCTTTTCGTAATTCTTCAATCAAGTCTTACTCGCCAGCAGAAAGCCCTATCGATAGAGAAAACAAGACTCCTGAAAACGAAACAACAGATGTTGATGTGGAGGCTGTTGAACCAAAAAGGGAGGAATCCCCAGTTTCAATGTTGTCTCCTCCGTTAGCATTTCCCATGGCCGTTCATGCTCAGCACAACAATAGTCTTATGAACGCAATGTACCAACCACGCTTTCCACGATATCACTCCGCTTCAGATGCCATACTGAATTCACAACACTCGCCATATGTTCCGAgtccatttaattttttatcaccaCTTCTGGGCACCGATGGCCCTGAGAGGCAGTCAAATGCTTATGCTAAATTTCGTGAACTGAGTGCTGGTTCCGCTAAACTAAGAGATCGTTATGCTTGCAAATTTTGCGGAAAAGTATTTCCACGTAGTGCTAACTTGACACGACATCTACGAACGCACACTGGAGAACAACCTTATAAGTGCAAGTACTGCGAACGCTCATTTTCTATATCATCTAATTTACAGCGGCATGTAAGAAATATTCACAACAAAGAAAGACCATTTAGGTGTCAGTTATGCGACAGATGTTTCGGCCAGCAAACTAATTTAGATCGGCatcttaaaaaacatgaaGCTGAGGGTGGAGATTCTCCGAGTTCTGGAGATACTGAACACGACGCGTGTTTTGATGACATTCGTTCCTTTATGGGCAAGGTGACATGCTCTCCGGTTCCTTCTCCTTCGACTAATTCGCCGCACTCCTCTCACCCCCCACACCCTCCACATCGTCCTTCTGCGATTTCCATCTCCATCTAG
Protein Sequence: MSDDQHLLLGWTLVGLDTFYRVNGKNGVWSWLDGTSEKSNWFILVRCTSSPNEVNLQHEKFAGQIWYKLTREVRSGQELLVAPWTSVPLQDSLTATGRESAASHSHPQPEEEDREDTKPRCFFCEEPFPNIDALDRHLIQAHAQPASAYHCEYCNRAYSYRALLLRHRALSHTDIKKYPCENCPKVFTDPSNLQRHIRAQHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHVACKTMSGCRKCGQSFSSYASLAKHKRFCETATTRNVNLRGQLGQGLQQIPPLPNSMNNPNNTNPFPMYRGSALPLPYNTFAHYPAFISAAAAAACPPDFFNPLLFNVQGARLAMEHDLALNASLMAKQQQEGERSVKRETESIDSLTSVDLLHKGKEIVCDDKDMDVDRVTPKPQDHYVKQSPPSAEEATSKQRPLPVMPMSTTVGPFDFSRNEMKPNSIYDFPMKINNSETLENKSVLQEPKDLSKNITDDIEKRDRYSNMEEDKIKEQNDQPLDLSVSRKPRDKESDVENDDNSFRNSSIKSYSPAESPIDRENKTPENETTDVDVEAVEPKREESPVSMLSPPLAFPMAVHAQHNNSLMNAMYQPRFPRYHSASDAILNSQHSPYVPSPFNFLSPLLGTDGPERQSNAYAKFRELSAGSAKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCQLCDRCFGQQTNLDRHLKKHEAEGGDSPSSGDTEHDACFDDIRSFMGKVTCSPVPSPSTNSPHSSHPPHPPHRPSAISISI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461745;
90% Identity: iTF_00842876;
80% Identity: iTF_00959573;