Mmaz004379.2
Basic Information
- Insect
- Mechanitis mazaeus
- Gene Symbol
- egg
- Assembly
- GCA_959347395.1
- Location
- OY365745.1:3120620-3138302[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 3.9e+03 -1.9 0.1 28 38 745 757 722 760 0.69 2 2 1e-13 3.2e-10 40.1 0.0 4 75 789 853 786 855 0.91
Sequence Information
- Coding Sequence
- ATGAGATTGGAGGCTTGGAGAGGATATCTTTTCTCGCAGCAACTAGAGACAAATTGCAAAGCATTGCTTTATCATTTGACAGTGAAGAATGACGATAACCGATCCACCGAACGGGAGGGCACCCGTATCCTCCCAGAAATGGTCGCCGGGCCCCACCGTCCGGTCACCGTCCGGCCTGGTGGGGCAGAATCCCTGAGTCTGTTCGGTAGGTTGGCGTCCACCACCCTCACTATGACGCTGCTAGTGCTCTGCCGGTACCACGTATACTGCGACAACAGTGATCCTGGCATGTTCCGGCTTTGCAaTGCTCAAGAATCCATCAAAGAGACTATAGAAGATTCTGAAAAAATACAAGACAATACAGTTAAAGAAGATTTAGTACCCgaaCAACCAAAACCAGATGAAGTAGAACCAAACCAGAAAACAGAACAATTAAAAAAGCCAACTAagAGTAAATCTCAAGGGCTGGAAGTTTTCACTTTGGATTCTGATGATGAGGAAGTTCATGAAAAGGAAGAAATTGTACCAGtccCACAGCAGAACCCAAAAGAAAAGATCTCGGCACCAGTAAAGTGTATCAACAAGTTATGTAATAGGAACAGTTCTGACTACTACAGAGCTGATAACACTACTGTGAATTACTACGACCCTGAAAGGAGAAAACGAGGGTATGTTTGCCAGAACTGTCTGGATGTGGTGGAAAAGAGGAATCAGATTCTAATATCTGGAATCCGCGATCTGGTCCCTCTCCTGGAACTGGACCCTGGTCGTCCAGCTGACGAGCTGGTAGAGATCTCTGACTCCGAGTCCGAGGAAGAGGCAGAGCCTCAGGACCCTGATGAGAGCACGCTTGGCGAGTTAGGCGCTagGGTTATGGAGGGGAAGCTGTGTGCGATAATGAACGAGACCTGGCAGCGGTTTCAGCTGGACGACCGTTTAATGCAAGCGCAAGGACAGCTACAAGAGGAGCTTAAAGCGCTGCAAAagGAAAGTCTAGAGATCAATCAGATGTTGGACGACTGTCAGGTGACCACAGACAAACTCCGCACAGAGCTTTACGCCACCTTCGAGTGCGACATCAAAGAACTACCCGCAGTCGTTATCTACGATGTACCAAACTGCTCTtatacCTGTGTGGATCCTTCTGGAAAGgggAGTCGTTACTTGAAACGCAAAAAATCTTCGCCTTCTGAGATCCCTGCCAAGAGATCAGCTATACCACTGGGATATGCCCCGTTGACTGACAAGAACGCTAAAACTATGGAATtgaaaaacgaaaaaatagaCGATGAAAATCAGGATGTATCCGTGGTGCATCTGTCGGTGGAGGCGGCGCCCCCAGACCTGCCGCCCGCGGGGGAGATGTCGTATCCTCCCCTCAAGGTGGGGATGACGGTGTTCGCCTCCAAGAACGTCTTCGGATCCTGGATGAAAGCAAGGATTGTAGAGATCACACCCAAAAATGCGtcAATGCCCTTCACCATGTGTAGAGTGAAATTCGAGTACAAATTATCGAAACCAACCAAAATACTCCCCGCTAGGTGTCTCGCCTACGCAGATCCACCTGACGTCCGGATGACTATTGgaACCCGTGTGATCGCTCTCTTCAAGGATATCAATATGCGTGATTCCTTTTACTCGGGAATCGTTGCTGAAATACCTAACCCCGTTAATAATTACCGCTACCTGATATTCTTCGACGATGGCTACGCTCAGTACGCTCACCACTCGTCAGTGCGCGCTGTGTGCGAGCGCTCCGCCCTGGTGTGGGAGGAGGTGCAGCCTAAGTCCAGGGATTTCGTGAGGAAGTACCTGCTGGCCTACCCCGAGAGACCCATGGTGCGATTGCACCCTGGACAGAGCCTCAAGACGGAGTGGAGGGGTAACTGGTGGTCATCAGTTGTGATGTCAGTTGACGCTTCTTTGGTGGAAGTTCAATTCACTAATAGAGACAGGAGGGAATGGATCTACCGAGGGTCTACTCGCTTGGCACCGCTGTACCTGGAGCTGCAGGCTGCGGAGCGACATAGGCCTAGGGCTTTGCCCCGGACACAGCCTCACAGTAGGACAAACATGCCATACGTGGAGTACACAAGATCAGAAGAACAGACAAGCAAACAAACAGAATCTAGTCAACACCAACAGCAAACAGAGGAACTTCGACGTCAGAGAGCTGTAGCTAAGAAGTCCACAACAGAAGTGAGGCCACCGCCGCCCTCTTCTGGACAGAATCTCGATAATGTTACTAGTCGGGTTGTGTACTACACTCCCAAGAAACAAGTGAAACCATTGAAGATGGTTCCCCATACTTGCTCACCTAAATGTAAAAGGGCGGATGTACTGGCGCTGAAGGACCTCAGGACTTACAATCCACTGGCGAAGCCTCTACTAAGCGGATGGGAGAGGCAGATAGTCCGCTTCAAGGGCAGTAAGGTGGTGGTGTACGTGTCTCCGTGCGGGCGGCGCGTGCGCGGGCCGGCGGAGCTGCACGCGTACCTGCGCGCGGCGCGCTCGGACCTGCCGCTGGACCTGTTCGACTTCGCGCCCTCCACGCACTGCCTGGCAGAGTTCGTGCTCAACAAGTGCTACGTGGGGAAGAAGGACTTATCCCATGGAAAGGAAAACGTACCTGTCCCGTGCGTGAACTACTACGACGAATCTCTGCCAGAGTTTTGTTCCTATAATACGGAGCGAACGCCCACCGCTGGGGTCCCACTCAATCTGGACCCGGAATTTCTGTGCGGCTGCGACTGTGATGACGATTGCGAGGATAAGAGCAAGTGCGCGTGTTGGAAGCTGACTCTGGAGGGGGCCCGTACGATTGGATTGGAGGGGGATGTCGGCTACGTTTATAAGAGACTGCCCGAGCCTTTACCGAGTGGAATATATGAGTGTAATTCTAGATGTAAATGTAAGGACACTTGTCTTAACCGAGTCGCGCAGCATCCACTTCAACTTAAACTACAAGTATTCAAAACATTGAACCGTGGTTGGGGCATCCGGGCCCTGAATGACATCCCGCGAGGAGCCTTCGTGTGTGTGTACGCGGGGAACCTTCTCACGGACGCCACGGCAAACCTGGATGGACTAAACGAGGGCGACGAATACTTAGCTGAGTTGGACTACATAGAAGTAGTAGAACAGATGAAGGAAGGTTATGAAGAAGATATACCAGAGAAGATAAAGAAGTCTGATCagGCGGAGCTAGCTAATAACCAGCTAGCACCAGATGACGAGATGCCTTCCTCGTCATCAGAAGATGAGGGCAGCAACAACAATGGAGAGGAAGACGATGACTTCAGACCTGGATATATAGGACTCGGGGTCACAGAGttcaaCAAACGATTACGCAGAAGAGATTCAAAGGTAGAGAACAAAGAGACTCCGGTTAAGAAAGTTAATGAAAAAGATAAACTGGATATGAAGAAAGACAACGAAGAAGAATGCATCACCATCAGTGATGACGAAGAAGtgCGTGAACCGTCTTGTTTCACAGCTGCGGCCGGAATGGGCgctaatgaatttaaatctaaatatagATCCGTTCGCAGTCTGTTCGGTGAGGATGAAGCTTGCTACATCATGGACGCGAAGGTGCAAGGAAACATCGGCAGATATCTCAATCACTCGTGCGTGCCCAACGTGTTCGTGCAGAACGTGTTCGTGGACACGCACGACCCTCGCTTCCCGTGGGTGGCGTTCTTCGCTCTCCGCGCCGTGCGGGCGGGCGGAGAGCTCACCTGGAACTACAACTACGACGTGGGCTCTGTACCCGGGAAGGTGCTCTACTGCTACTGCGGGGCGCCAACCTGCCGAGGACGACTGCTGTAG
- Protein Sequence
- MRLEAWRGYLFSQQLETNCKALLYHLTVKNDDNRSTEREGTRILPEMVAGPHRPVTVRPGGAESLSLFGRLASTTLTMTLLVLCRYHVYCDNSDPGMFRLCNAQESIKETIEDSEKIQDNTVKEDLVPEQPKPDEVEPNQKTEQLKKPTKSKSQGLEVFTLDSDDEEVHEKEEIVPVPQQNPKEKISAPVKCINKLCNRNSSDYYRADNTTVNYYDPERRKRGYVCQNCLDVVEKRNQILISGIRDLVPLLELDPGRPADELVEISDSESEEEAEPQDPDESTLGELGARVMEGKLCAIMNETWQRFQLDDRLMQAQGQLQEELKALQKESLEINQMLDDCQVTTDKLRTELYATFECDIKELPAVVIYDVPNCSYTCVDPSGKGSRYLKRKKSSPSEIPAKRSAIPLGYAPLTDKNAKTMELKNEKIDDENQDVSVVHLSVEAAPPDLPPAGEMSYPPLKVGMTVFASKNVFGSWMKARIVEITPKNASMPFTMCRVKFEYKLSKPTKILPARCLAYADPPDVRMTIGTRVIALFKDINMRDSFYSGIVAEIPNPVNNYRYLIFFDDGYAQYAHHSSVRAVCERSALVWEEVQPKSRDFVRKYLLAYPERPMVRLHPGQSLKTEWRGNWWSSVVMSVDASLVEVQFTNRDRREWIYRGSTRLAPLYLELQAAERHRPRALPRTQPHSRTNMPYVEYTRSEEQTSKQTESSQHQQQTEELRRQRAVAKKSTTEVRPPPPSSGQNLDNVTSRVVYYTPKKQVKPLKMVPHTCSPKCKRADVLALKDLRTYNPLAKPLLSGWERQIVRFKGSKVVVYVSPCGRRVRGPAELHAYLRAARSDLPLDLFDFAPSTHCLAEFVLNKCYVGKKDLSHGKENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCDDDCEDKSKCACWKLTLEGARTIGLEGDVGYVYKRLPEPLPSGIYECNSRCKCKDTCLNRVAQHPLQLKLQVFKTLNRGWGIRALNDIPRGAFVCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPEKIKKSDQAELANNQLAPDDEMPSSSSEDEGSNNNGEEDDDFRPGYIGLGVTEFNKRLRRRDSKVENKETPVKKVNEKDKLDMKKDNEEECITISDDEEVREPSCFTAAAGMGANEFKSKYRSVRSLFGEDEACYIMDAKVQGNIGRYLNHSCVPNVFVQNVFVDTHDPRFPWVAFFALRAVRAGGELTWNYNYDVGSVPGKVLYCYCGAPTCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00960188; iTF_00461583;
- 90% Identity
- iTF_00960188;
- 80% Identity
- -