Mmaz007822.1
Basic Information
- Insect
- Mechanitis mazaeus
- Gene Symbol
- -
- Assembly
- GCA_959347395.1
- Location
- OY365747.1:3552165-3557788[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.2e-12 1.1e-08 35.1 0.0 4 39 166 202 163 206 0.89 2 4 2.6e-11 4.1e-08 33.4 0.2 2 39 218 255 217 258 0.91 3 4 1.4e-16 2.3e-13 50.2 0.2 2 45 273 317 272 317 0.97 4 4 1.9e-18 2.9e-15 56.2 0.0 1 42 324 366 324 369 0.95
Sequence Information
- Coding Sequence
- ATGCCAGGAACAGAAAGATTTCACGTCAAAAGCGAGCCACAGTCTGATGAAGAGGATTTTAATTCACAATACGTAAAAgcatactttaaaaatcagctaCCTGAATACCAACccattaaaatagaaaatactcGAGGAGATGATAATGCCTCGTCCAACCTGTTACATCAGCTGCAGGGCTCTCTGGAGGAGCTGGCACCAGCGGGGCCGGCCGCCACGCCCGTCAGCGCGCCGTTGCCGGCCCCGCGGGACACCTCGCTCGCCACGCTGCAGCCCGCCCACCACCACGAGGGAACATCATTAATCGATAGACACATACAAATGATGAGTGCTAACGAGGTAGCGGATTCTTCAGAATTCGTGCCCCTCATGGCTATTAAGGACGAGCCAAGTTCAGAAGGAGAACAGCCACATCTAAGCGGCGACGACACGAGCGACTCCAACGGTCCGACGACGGAGACCAGCCGCGGCGGTCCCAAGACCTGGACGCAGCAGGATATGGATAAAGCGTTGGAGGCGCTCCGGAAACATAATATGAGTCTCACTAAGGCTTCTGCGACATACGGTATTCCGTCCACAACTCTCTGGCAGCGAGCTCATCGCCTCGGCATCGACACGCCCAAGAAGGAGGGCAGTTCCAAATCCTGGAACGAGGCGGATCTACGTGGAGCACTGCATGCGCTTCGGGCCGGCGCCATATCTGCCAATAAAGCCAGCAAGGCCTACGGTATCCCGAGCAGCACGTTGTACAAGATCGCTCGTCGCGAGGGCATCCGCCTCGCCGCGCCTTTTAACGCCGCGCCGACCGCCTGGCGCCGCGACGACCTGGCGCGCGCGCTCGCCGCCATACGGGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCCACCTACGGCATACCCACCGGAACTCTGTATGGAAGGTGTAAAAGAGAAGGCATAGAGCTGTCCCGCTCTAATCCCACGCCGTGGTCTGAAGACGCCATGGGAGAAGCTTTAGAAGCTGTTAGggTGGGTCAAATGTCCATCAATCAAGCTGCCATACACTACAATCTTCCATATTCGTCACTTTACGGGCGTTTTAAGCGCTGCAAATACCAGCCACTGCAGACCCAGCCCCAACAAGAGCTACCAATGTACGAAAATGAAAATCAACAACAAGACGTTTTCTACCAACGTACACCTACACATACAAATCTACACAACCCATACATACACGAAATGAGCGACGTagatacatacacacatatgtATTACTCGCATTGTAATGTTACCAGCTGA
- Protein Sequence
- MPGTERFHVKSEPQSDEEDFNSQYVKAYFKNQLPEYQPIKIENTRGDDNASSNLLHQLQGSLEELAPAGPAATPVSAPLPAPRDTSLATLQPAHHHEGTSLIDRHIQMMSANEVADSSEFVPLMAIKDEPSSEGEQPHLSGDDTSDSNGPTTETSRGGPKTWTQQDMDKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSSKSWNEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRDDLARALAAIRAGAASVQRAAATYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQPLQTQPQQELPMYENENQQQDVFYQRTPTHTNLHNPYIHEMSDVDTYTHMYYSHCNVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01033644;
- 90% Identity
- iTF_01033644;
- 80% Identity
- -