Mlys009009.1
Basic Information
- Insect
- Mechanitis lysimnia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_036026155.1
- Location
- JAYRBX010002690.1:185-759[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-40 2.4e-36 127.0 0.1 89 223 2 138 1 153 0.93
Sequence Information
- Coding Sequence
- TTACAGCACGAGCTAAAGGAAGTCGAGGAGAAGTTCCGCAAGGCGATGATATTGAACGCGCAGCTCGACAACGACAAGGCGGCTCTCGGGTACCAGCTCGAGCTGCTGAAGGACAGGATCGAGGAGCTGCACGAGGAGTACGCGCAGCTACAGCGCGAGCACCGCGAGAAATGTTCGAGCCACGAGCGCCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGAGCTGCGCGCGGGACGCCGTGCGGGCGCGCgacgcggcggcggcggcggcgggcaGCGTGTTCGTGGAGGCGGCCACGGCGCCGGGGGCCGCGCCGGGGGAGCCCTGCGGCGCCGTGCCGCCGCTCGCGCTCGTGTCGCACGCCTCCAGCCGCCTGCTGGACGACGCGGGAGAGGGCACGCTCGGTCTGCATACTTCTGTTAACTGTGAACTTAGGGAGTTATTGCTAATCGAGTCCGGCGACAGGACACGAAATAAcatgcattaa
- Protein Sequence
- LQHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSHERLKREHASLEREVSCARDAVRARDAAAAAAGSVFVEAATAPGAAPGEPCGAVPPLALVSHASSRLLDDAGEGTLGLHTSVNCELRELLLIESGDRTRNNMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -