Mlys013560.1
Basic Information
- Insect
- Mechanitis lysimnia
- Gene Symbol
- -
- Assembly
- GCA_036026155.1
- Location
- JAYRBX010035761.1:7757-10454[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-11 4e-08 34.3 0.0 3 39 174 211 172 214 0.92
Sequence Information
- Coding Sequence
- atgagtGGCGAAGAAGATTCCGCCGAATATATAATCATTCCAGAGCATTTGAGTCGGTGTAAATGCTGTTTCGACGACAACAATCTTAGAAGCATGTGGGACGTTTATGCTAACGATGGCGAGCAAGAAGTTTACGGAGAAATGATTAGAGAGTGTTTCGCTTTATCgTGGGAGTCCCATGAGGAAGGTGCTTTGATATGTGAAATGTGTATATTGAGGCTGAGAGAAGCCCTAACTTTTAAAAGAGGCATACTTGCTACTCACGAACTCCTCCAAGATGcaATAGACTGTAAAGACCTGAAACAATTGTCCATTGAAATAGACACAGATCACGTCAAAGAAGAATGGATAGAAGAGCCGGAGGAGATTCACCAAAATGGCAACTTACAAGATAACTTTCAGGATGTTGAGTATCTAGATGATGaagaaacaCCTTCATCTCCAGAGCCAAAAAAGTGTAAATGGCccaaaaagaagaagaaatcaGAACGATTAGCCAAGTACAAGCAGTACTCCACTGAGGATATGAGGCTGGCCATTGCTGCTGTAAGGAGTGGAGAAATGACTTGCAATATAGCTGCTATAACTTATGGTATTCCAAAAAAAACACTTACGGCTAAGTCTAAGGAGGAGATTAAAGATGATGATGAAGGTAAAGGGGCTGGCAGCGAAAAGCATTACaaactaataaaagaaattaaaataatcttgaaataCACAAACGCAATTCCCTTCAAGACAAAGACAACTCGCTACTACTGTGCATACTGTTCCACCGATGGACCCATCTTTGAGGATGGGGAATCTCTTCGACTCCACACAAAGCTAGAACATGATAAGGAAAGATTACGGGGTGTTGAGAAGTTCATGCGACCTCAATGGATGAATGAAATAGTCAAACTTGACATTGAAGGGCTTCATTGTACTGTTTGCAGAGTTCGCTTGCCTGATTGGAACAAAATGTTTGTGCATATTGCAAATACCCACAATATAGAGTTTGATCAAGCTTACACAAGAGTAATACCATATGCTTTGACCTCCCAATTGAAGTGTGTGCTATGTAAAGAAGGGTTCCACAACTATGGCCATGTGGACAGTCATATGAACCATCATTATAGTAACTATATATGCCACCAGTGTGGAGATACTTTTCTAGCGGCAAGTCgttttgataaacatttaaaagtgcATAAAATAGGTAGTTATCCTTGTGAACTGTGTGACAAAGTGTTTACATTAGAGAAGTAtagaacaaaacataaaaatttagttCATGATCAAAAAAGTATGGTCAAGTGTTTGTATTGTCCTGAACGGTTTGTCGGTTTGTTTCAACGGCATGTGCATGTCACCGAGCATCATAAGGATAAAGTGAAAGTGTATACCTGTGAACTGTGCGGCAACTGTTATACTTGGAAGACATACTTCCTTGCCCACATGAGGAGACGGCATGGTACAGAACGGAAGCATCAATGCAAGCATTGTGATAAATCATTCTTAATGAAATATGAACTGAGAAACCATATGGTGCGACACACTGATGAAAAATTTCTTTGTGGTCTGTGTGGCAAGAGTTTTAAACGGATAATCAGTTTGAAGAAGCATTGTCTGACTCATGAAGAGTTTAATATCGAAGAAGAttcacatttataa
- Protein Sequence
- MSGEEDSAEYIIIPEHLSRCKCCFDDNNLRSMWDVYANDGEQEVYGEMIRECFALSWESHEEGALICEMCILRLREALTFKRGILATHELLQDAIDCKDLKQLSIEIDTDHVKEEWIEEPEEIHQNGNLQDNFQDVEYLDDEETPSSPEPKKCKWPKKKKKSERLAKYKQYSTEDMRLAIAAVRSGEMTCNIAAITYGIPKKTLTAKSKEEIKDDDEGKGAGSEKHYKLIKEIKIILKYTNAIPFKTKTTRYYCAYCSTDGPIFEDGESLRLHTKLEHDKERLRGVEKFMRPQWMNEIVKLDIEGLHCTVCRVRLPDWNKMFVHIANTHNIEFDQAYTRVIPYALTSQLKCVLCKEGFHNYGHVDSHMNHHYSNYICHQCGDTFLAASRFDKHLKVHKIGSYPCELCDKVFTLEKYRTKHKNLVHDQKSMVKCLYCPERFVGLFQRHVHVTEHHKDKVKVYTCELCGNCYTWKTYFLAHMRRRHGTERKHQCKHCDKSFLMKYELRNHMVRHTDEKFLCGLCGKSFKRIISLKKHCLTHEEFNIEEDSHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00421282;
- 90% Identity
- iTF_00960102;
- 80% Identity
- -