Dple004040.1
Basic Information
- Insect
- Danaus plexippus
- Gene Symbol
- -
- Assembly
- GCA_018135715.1
- Location
- JAEQBL010000033.1:573439-577486[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-10 6.9e-07 29.2 0.0 3 35 172 205 170 209 0.92
Sequence Information
- Coding Sequence
- ATGAGTGTCGAAGAGGATTCTCCTCAATATATAATAATACCAGAAAGTTTGAGCCGATGTAAGTGCTGTTTCGACGACAATAATCTAAAAAGCATGTGGGATGTGTATAGTAATGATGGCGAACAAGAAGTTTACGGAGATATGATAGGAGAGTGCTTCGCAATATCGTGGGAGACCCACGAGCAAAGTGATCTCATCTGTGAGATGTGCGTAATAAGACTGCGAGAGGCCCTCACCTTCAAGAGAAACATACTGGCCACACATGAACTGTTACAGGAAGCGATAGACATGAAAGATGTGAAACAATTTCCGTCCATCGACGTGGAGATGGAGACGCAGGTGAAAGAGGAATGGATAGAAGAGGCCAGCTACAACGACAGCGTACCGGATGGCTTTGAGGATGTGGAGTATCTTGATGAGGAGGACGGAGTACAAACACCCGAACCTAAAAGGAAGTGGCCGAAGAAGAAAAAGAAGTCTGAAAGGCTAGCCCGATACAAGCAATACTCGGCTGACGATATGAGGCAAGCTATTAAAGCTGTTAGGAGCGGGGAAATGACCTGCACCATAGCAGCCATCACTTACGGCGTGCCGAAGAAGACGTTGACAGCCAAAGCCAATGACAAAGATAGAGACGAAGACGACAGCAAGGACTCTACCAGCGAGAAACACTACAAGCTGATAGAGGAAATCAAGAATATATTGAAATTCACCAACGCCATACCGTTCAAGACGAAGACTACCCGCTACTACTGCGCGTACTGTTCCACGGATGGGCCGATATTCGAGGACGGGGACTGTCTCCGGCTGCACACGAGACTGGAGCACGACAAAGAGAGGTTGCGGGGCGTGGAGAAGTTCATGAGGCCGCAGTGGATGAACGAAATCGTCAAACTGGACATAGAGGGCCTGCATTGTACCGCATGCAGGGTGAGGCTGCCCGACTGGAACAGGATGTTCGTACACTTCGCGAATGCGCATAATATAGAGTTTGATCAGGCGTACACCAGGGTGATCCCGTACGCGCTGACCTCACAGCTGAGATGCGTGCTGTGCAAAGAGAGCTTCCACAACTACGGCCACGTGGACAGCCACATGAACCATCACTACAGCAACTATATATGCCACCAGTGTGGCGATACCTTTTTGGCTGCGAGCCGTTTCGATAAGCACCTCAAGGTGCACAAGATAGGCAACTATCCGTGCGAGTTGTGCGACAAAGTTTTCACGCTGGAAAAGTATAGGACGAAGCATAAAAACCTGGTCCACGACCAGAAGAGCATGGTGAAGTGTCTGTATTGCAGCGAGAAGTTTGTCGGCCTGTTCCAGAGGCACTTGCACGTGACCGAACAGCATAAAGACAAGGTTAAGGTGTACACGTGCGAGTTGTGCGGCAACTGCTACACCTGGAAGACATACTTCCTGGCGCACATGAGGAGACGGCACGGGACTGATAAGAAGCACCAATGCAAGCATTGTGATAAATCCTTCTTAATGAAATACGAGCTGAGAAACCACATGATAAGACATACGGATGAGAAGTTCCTTTGTGGGCTCTGCGGCAAGAGCTTCAAGAGAATGCTCACCTTGAAGAAGCACTGTCTAGCTCATGAAGAGTTCAGCGCTGAAGATTGA
- Protein Sequence
- MSVEEDSPQYIIIPESLSRCKCCFDDNNLKSMWDVYSNDGEQEVYGDMIGECFAISWETHEQSDLICEMCVIRLREALTFKRNILATHELLQEAIDMKDVKQFPSIDVEMETQVKEEWIEEASYNDSVPDGFEDVEYLDEEDGVQTPEPKRKWPKKKKKSERLARYKQYSADDMRQAIKAVRSGEMTCTIAAITYGVPKKTLTAKANDKDRDEDDSKDSTSEKHYKLIEEIKNILKFTNAIPFKTKTTRYYCAYCSTDGPIFEDGDCLRLHTRLEHDKERLRGVEKFMRPQWMNEIVKLDIEGLHCTACRVRLPDWNRMFVHFANAHNIEFDQAYTRVIPYALTSQLRCVLCKESFHNYGHVDSHMNHHYSNYICHQCGDTFLAASRFDKHLKVHKIGNYPCELCDKVFTLEKYRTKHKNLVHDQKSMVKCLYCSEKFVGLFQRHLHVTEQHKDKVKVYTCELCGNCYTWKTYFLAHMRRRHGTDKKHQCKHCDKSFLMKYELRNHMIRHTDEKFLCGLCGKSFKRMLTLKKHCLAHEEFSAED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959347; iTF_00960102; iTF_00958615; iTF_00461500; iTF_01033665;
- 90% Identity
- -
- 80% Identity
- -