Mlys067553.1
Basic Information
- Insect
- Mechanitis lysimnia
- Gene Symbol
- -
- Assembly
- GCA_036026155.1
- Location
- JAYRBX010451284.1:1-1161[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-11 4.4e-08 34.1 0.4 8 39 4 35 1 38 0.93 2 3 1.5e-17 4.6e-14 53.3 0.2 2 45 53 97 52 97 0.97 3 3 0.0056 18 6.6 0.1 1 13 104 116 104 116 0.92
Sequence Information
- Coding Sequence
- CTACGTGGAGCACTGCATGCGCTTCGGGCCGGCGCCATATCTGCCAATAAAGCCAGCAAGGCCTACGGTATCCCGAGCAGCACGTTGTACAAGATCGCCCGTCGCGAGGGCATTCGCCTCGCCGCGCCTTTCAATGCCGCGCCGACCGCCTGGCGCCGCGACGACCTGGCGCGCGCGCTCGCCGCCATACGGGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCCACCTACGGCATACCCACCGGAACTCTGTATGGAAGGTGTAAAAGAGAAGGCATAGAGCTGTCCCGCTCTAATCCCACGCCGTGGTCTGAAGACGCCATGGGAGAAGCTTTAGAAGCTGTTAGataa
- Protein Sequence
- LRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRDDLARALAAIRAGAASVQRAAATYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00283237;
- 90% Identity
- -
- 80% Identity
- -