Mpay009270.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Meandrusa payeni
Gene Symbol
L
Assembly
GCA_029286785.1
Location
JAGSMX010000014.1:5647156-5653347[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.5 40 5.4 5.8 1 23 15 37 15 37 0.97
2 16 6.7e-06 0.00054 20.7 4.1 1 23 43 65 43 65 0.99
3 16 2.1e-05 0.0017 19.1 0.1 1 23 71 93 71 93 0.98
4 16 0.0016 0.13 13.2 0.0 2 23 109 131 108 131 0.95
5 16 4.8 3.9e+02 2.3 0.1 9 23 162 177 158 177 0.93
6 16 0.24 19 6.4 0.0 3 23 233 253 232 253 0.97
7 16 0.071 5.7 8.0 0.0 3 23 267 287 266 287 0.93
8 16 9.4e-05 0.0076 17.1 1.2 1 23 295 318 295 318 0.91
9 16 0.026 2.1 9.4 0.1 1 23 323 346 323 346 0.92
10 16 0.019 1.5 9.8 0.1 1 23 397 421 397 422 0.90
11 16 0.00016 0.013 16.4 0.1 2 23 475 496 474 496 0.96
12 16 0.098 8 7.6 0.0 1 23 502 524 502 524 0.97
13 16 0.48 39 5.4 0.7 2 23 532 553 531 554 0.94
14 16 0.6 49 5.1 0.2 3 23 630 650 629 650 0.95
15 16 0.0028 0.22 12.5 0.1 1 20 658 677 658 680 0.95
16 16 0.061 4.9 8.2 0.3 1 23 687 709 687 709 0.94

Sequence Information

Coding Sequence
ATGAAAATATTTCGTTTGCAGACTCATTCGGATCAGATGCCGTTCCGCTGCGAATTCTGCTCCAGACTGTTCAAGCACAAGAGATCGCGCGACCGCCACGTGAAGCTGCACACGGGAGACAGGAAGTACCGCTGCGCTCACTGCGAATCAGCATTTTCTAGAAGTGACCATCTAAAGATCCACATGAAGACACACGACAATCAGAAACCATTCCAGTGCACGGTGTGCAACCGCGGCTATAACACCGCGGCCGCGTTGACGTCACACATGCAAGGCCACAAGCGAGACAGGGAGGGCCGCGACCTGGATCGCCGCAGGAGCCTGCGATGTCTGCAGTGTGGCGACGCCTTCAGGCGCCCTGAAATGCTGCAGGCTCACGTGGCCACAGCCCACGGCGTGGACGGAGCCTCCCTGACCCCGCCACGACGTGTCGCATCGCAACCGCCGCCGACTCTCCTCGCCTGCATATACTGCACAAGGGACACGTTCACCAGCATGGAGCAGCTGCAGCTGCACGTCCGCGCTGCGCACTCAGCGCTACTCAACGGCGACACAGCAATGCCCTCTACCGTCGAACAGCCGACACCGACCGATCTGAGTCGCAGAACAAGTGATGACGTCACAACGGCTAAACGCCCGAGATCTAGTTCAGGGTCAGCTACGCCACAAGCAAACCTATCGCCTAGTACTCTTCTATGTAACCAATGCGACGCGGCTCTACCAGATTTTGAAGCATTTAGAGCTCATCTCAAGGGGCATCTAGAAGAGGGAGGAGAACTCCGGTCTAGCCCCGCGCCCTGTGTGCATTGTGGCGCTAGTTTCGCTGATGTAGCGGCGACGGAGCGCCATCTAGCAGCGCATTACCTGGCCGTCTCCTGCGAGTACACCTGTCACAGTTGCGTGCGCAGCTTCCCAACGCCAGACGACTTGCAGAAGCATCTCTTCGATTTACATGCTCATCACTTATATCGGTGTTCACTATGTAAAGAAATCTTTGATTCGAAAGTGGCCATCCAGGTACATTTCGCCGTTGCACACAGCGGAGAAAGCAAGGTGTGGATGTGTCGGCCGTGCGGCACTAGTGGCGGTGCCATGCGGTCGGAGGCGGAAGGCGCGGCGCACGTCCGGGCCCGACACGCGGCCGCTCGCTGCAGCTGCGGTGCTGTGCTGGCCGCCCCGCGCCGCGCCTACCGCTGCCCGGCGCCAGCATGCGCTGACAGCTTCGCAGTGCAGTACCTACTAGAGCGGCACATGCAAATACACCACGCTATACCACAACAGacGTTAAACGGCGAAATGATCCGGCCGAAGAGAGCAGACAACAATAACGTAGAGGGTGACGGGGGCTGCTCGCCGTGCGTCAGCGGCGACGGGCCTGCTCTGCTGGAGGAGCGCCGCAGGAAGAATGGTGCCGTGGCCCTGCAATGTGCCTACTGCGGGGAGCGCACGCGCAGCCGCGCCGAGTTGGAGGCGCATACCAGGGCACACGCGGGCGCCGCGAGACACAAGTGCCTCATTTGCGACGAGGTGCTGCCTTCCGCCGGGGTGCTGGCCGaacataagctctcacattGCAAGGTCGTGGCTGGCGATACTTGTTCGCGTTGCCGAGCTAGACTACCATCAGAAGACGCATTCCTCACTCACATGGCACGTCATCACCCCGCCCTGCCCGCTCCATGTGTTGTTTGCCGCCAGACACTGGCTTCCGAAGCAGAAGCACGACTCCACGGCCGCTTCCACCTCCGCCCTAATGAAGATGAACAACGATGCGCAATATGCCTGAGGCCACTAACTGAGAGCGAGGCCGGAGAGGGAGTGAGAGCCTGCTCTTCTTGCTACGCCCGCCACTCCACACCTAGGCCCACCCCAACAGCAGACAACGATTGCCGACTGTGCAGACGTTCCCTTGGATCTCCAACCCGATTACAAGCACATCTAATAGAACATACCTTTGCAGGTATTGGCGCATTTACGTGTTATTTGTGCTCAGCAGTGTTTACAAGCGCCGCTGGTTTGCAGCGCCACCTGCCCGAGCACTCATCCGCACCGCGGCCCTACGACTGCGGCCGGTGCGGAATGAAATTCTTTTTCCGTGCCGAGCTCGATAACCACGCTTTTGTGCATATAGAGGAGGCGGAAATAGCTCAGAGAGCGTTTTATGAGGCTTACGCAAGAGGCGCCGCTTCAGCGTGGGCGGCACTCGCACCACCGCCGGAAGCTACTTCTATGTCATCATTATCAGTTCCCGCTCCACCTATAGCAGAAGTTTCCGTTAAAACAGAGCCCGAGGTAAAAGAAGAACGGAATGCTGATGAGTATATCGAAGTGTCGTCCCCTCCCCCTGCCGCTCTGCCGCCGCCTGCTTCGGCTTCTCCCGCTCCAGTGGTGAAGCAAGAGAAGCCCGACGAAGAATGA
Protein Sequence
MKIFRLQTHSDQMPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDREGRDLDRRRSLRCLQCGDAFRRPEMLQAHVATAHGVDGASLTPPRRVASQPPPTLLACIYCTRDTFTSMEQLQLHVRAAHSALLNGDTAMPSTVEQPTPTDLSRRTSDDVTTAKRPRSSSGSATPQANLSPSTLLCNQCDAALPDFEAFRAHLKGHLEEGGELRSSPAPCVHCGASFADVAATERHLAAHYLAVSCEYTCHSCVRSFPTPDDLQKHLFDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGESKVWMCRPCGTSGGAMRSEAEGAAHVRARHAAARCSCGAVLAAPRRAYRCPAPACADSFAVQYLLERHMQIHHAIPQQTLNGEMIRPKRADNNNVEGDGGCSPCVSGDGPALLEERRRKNGAVALQCAYCGERTRSRAELEAHTRAHAGAARHKCLICDEVLPSAGVLAEHKLSHCKVVAGDTCSRCRARLPSEDAFLTHMARHHPALPAPCVVCRQTLASEAEARLHGRFHLRPNEDEQRCAICLRPLTESEAGEGVRACSSCYARHSTPRPTPTADNDCRLCRRSLGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHSSAPRPYDCGRCGMKFFFRAELDNHAFVHIEEAEIAQRAFYEAYARGAASAWAALAPPPEATSMSSLSVPAPPIAEVSVKTEPEVKEERNADEYIEVSSPPPAALPPPASASPAPVVKQEKPDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01141854;
90% Identity
iTF_00923049;
80% Identity
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