Mpay003452.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Meandrusa payeni
Gene Symbol
-
Assembly
GCA_029286785.1
Location
JAGSMX010000005.1:4649839-4676848[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 7.8e-05 0.0063 17.3 2.2 1 23 465 487 465 487 0.97
2 20 0.00091 0.073 14.0 0.7 1 20 493 512 493 515 0.94
3 20 2e-05 0.0016 19.2 5.6 1 23 534 556 534 556 0.98
4 20 0.00018 0.015 16.2 4.7 1 23 562 584 562 584 0.99
5 20 0.00014 0.011 16.6 5.4 1 23 590 612 590 612 0.97
6 20 1.1e-05 0.00089 20.0 7.3 1 23 618 640 618 640 0.97
7 20 9.3e-07 7.5e-05 23.4 2.7 1 23 646 668 646 668 0.97
8 20 9.8e-05 0.0079 17.0 6.7 1 23 674 696 674 696 0.97
9 20 0.00014 0.011 16.5 6.5 1 23 702 724 702 724 0.97
10 20 9.8e-05 0.0079 17.0 6.7 1 23 730 752 730 752 0.97
11 20 0.00014 0.011 16.5 6.5 1 23 758 780 758 780 0.97
12 20 0.00031 0.025 15.4 0.4 1 17 786 802 786 803 0.94
13 20 2.2e-06 0.00018 22.2 5.5 1 23 852 874 852 874 0.98
14 20 1.1e-05 0.00086 20.1 3.0 1 23 880 902 880 902 0.97
15 20 0.00014 0.011 16.5 6.5 1 23 908 930 908 930 0.97
16 20 1.3e-05 0.001 19.8 6.4 1 23 936 958 936 958 0.98
17 20 4.4e-05 0.0036 18.1 6.2 1 23 964 986 964 986 0.97
18 20 6.3e-06 0.00051 20.8 3.1 1 23 992 1014 992 1014 0.96
19 20 0.0007 0.057 14.3 0.3 1 23 1021 1043 1021 1043 0.96
20 20 0.0041 0.33 11.9 4.5 1 23 1053 1075 1053 1075 0.99

Sequence Information

Coding Sequence
ATGAATCCTGAACACCACAATATCAATACGGGTGGTGGCCAACCTCCTGGTAACTCAGAGCCACAAAATCAAAGAGTAACTGCTGGTCcgcagcagcagcaacaacagcaacaACCGGCTAATAGTCTGACTCCCACAACTTCTGCTACCGACCTCCGAGTTAATTCGGCAGCTGTTAACGTTGCTTTATCTAGTGTCGCGAAGTATTGGGTGTTTACAAATCTATTTCCCGGACCTATACCTCAAGTTTCTGTGTACGGGTTACCAACCAACACAAGGCTTGAAAATGGAAAACCTGTAcagGAACTTGGGCAAGGCCATACAGGACTTCTGAATGGTGATCCAAATATTATTCTCAGCCAGCATGGAGGTCAGACACAATTGTCTGTATCAGGTCCTGGAGGTCAACAAATACCTGTCACTCAAATCATCGCAACACAACTGCAATCTGGGCAGGCACATGAATCACTGGTGGCTCACAGTCAGCAGCAAGACCTTGGTACACAGCAAAACTCTGGCAATGGAAACCAGGTCTCTGTTGCCACAGGCCAACCCTCTCACCAGCAGGTACCCAATAGTCGGGTCGAGTATATACAACACCATAGCATTGATATGGGTCATCATTCACAGCAGCATTCACTGCAGCAACAGCTTATGGAAACCAGGTCTCTGTTGCCACAGGCCAACCCTCTCACCAGCAGGTACCCAATAGTCGGTCGAGGTCATCATTCACAGCAGCATTCACTGCAGCAACAGCTTATGCCAACCAGTCGTCCTGATCATGCAAATCAACAGATACAGCTAACAGTGAGTGAAGATGGTATCATGACGGTTGTGGAGCCGGGCGGAGGGAAACTTGTTGATAAGGAAGAACTACATGAAGCCATTAAAATGCCCACAGACCACACACTCACAGTGCATCAGTTACAGCAGATAGTTGGCCATCATCagGTGATCGACAGCGTGGTTCGTATTGAGCAAGCTACAGGGGAGCCAGCTAATATACTCGTCACTCATAACCCCGATGGCACCACTTCCATAGAAACTAGCGCATCTGAGCATGTAAAGGATGAAAAAAATGTCTCCAAACTTGAATCTGCACAATTTGCGATACCTACAGACATTAAGGACATCAAGGGACTTGACTTAAAGAATGTAGGACCAATGGGCATGGAAGGAGCTGTGGTAAAAATTTCAGCAGGTGCCTCAGAGCATGACCTTCATGCAATGTACAAAGTGAATGTGGATGACCTATCACAGCTATTGGCATACCATGAAGTATTTGGTAAACTGAATCCTGAAGGCCAACAGCAAGCTAAGGTTATAACTGAAGTGGAAGTAGAAGCAGGAACTAGCGCTGCCATTTCAGAAAATGATTCCTCACCTGGCCATCATTCCTGTGACATTTGTGGGAAGATATTCCAATTCCGATATCAACTAATTGTTCACAGACGATATCATGGTGAGAGCAAACCATATACTTGTCAGGTTTGCGGCACTGCATTTGCCAACGCCATGGAACTGTCCAGGCATGGGAAATGTCACCTTGCCGGAGATCCAGCGGAGAGGCAAACGAAAAGGTTAACCCAAGACAAACCATATGCCTGTACAACTTGCCACAAAACATTCTCTCGTAAGGAGCATTTGGATAACCATGTCCGGAGCCACACTGGAGAAACTCCTTATAGGTGTCAATTCTGCGCGAAAACTTTCACCCGCAAGGAGCACATGGTGAACCATGTGAGGAAGCACACAGGCGAGACTCCGCACCGTTGTGATATCtgcaaaaaaaactttacaaggAAAGAGCATTTTATGAACCATGTCATGTGGCATACAGGTGAAACGCCGCACCATTGTCAAATTTGTGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCTCACACAAATGATACACCGTTCCGATGTGAATTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTATACCAATCACATACTGTGGCATACGGGCGAGACGCCGCATCGCTGTGACTTCTGTTCGAAAACATTCACGCGCAAGGAGCACTTGTTGAACCACGTTCGCCAGCACACGGGCGAGTCACCACACCGCTGCAGCTTCTGTTCCAAGTCCTTCACGCGGCGGGAGCACCTCGTCAACCACGTGCGACAGCACACAGGCGAGACGCCGCATCGCTGTGACTTCTGTTCGAAAACATTCACGCGCAAGGAGCACTTGTTGAACCACGTTCGCCAGCACACGGGCGAGTCACCACACCGCTGCAGCTTCTGTTCCAAGTCCTTCACGCGGCGGGAGCACCTCGTCAACCACGTGCGACAGCACACAGGCGAGACGCCCTTCCAGTGCGGATACTGTCCGAAAGCATTCACACGGAAAGACCACTTAGTAACACCGCGTTCCTACCGACGACTTTCATATAGCGTCAAGACCGCCCCGTATATGTCATTGGCTAAATATGTAAAAAGCGTCCATAACACAATAAGTATCAAATCGGAATGTACTCTGTTGCGCAGACAGCACACGGGCGAAACTCCACACAAGTGCACGTACTGCCCGCGCACGTTCGCGCGCAAGGAGCACCTCATCAACCACTTGCGCAAGCACACCGGCGACATGCCGCACCCCTGCTCCTATTGCAACAAGAAGTTCACGCGCAAGGAGCTGCTCGTCAATCACGTCCGACAACATACGGGCGAGACTCCGTTCAAATGCACGTTTTGTACGAAGGCGTTCTCTCGTAAGGAGCATCTGACGAATCACGTTCATCTCCACACCGGCGAGACTCCGCACAAGTGTCCATTCTGCACCAAAACCTACTCCAGGAAAGAACATTTGACCAACCACGTCAGAATGCATACCGGCGAATCGCCTCACCGTTGCGAATTTTGCGAAAAAACGTTCACAAGGAAGGAGCACCTGATCAACCATTTGAAGCAGCACACAGGAGACACTCCTCATGCCTGTAAGGTCTGCTCCAAGCCGTTTACAAGGAAGGAACACCTTGTTACACATATGAGAGCACACAATTGCGGAGAGAGACCATTCAGCTGTGGGGAATGTGGGAAGTCGTTCCCATTGAAAGGCAACTTATTATTCCATGAAAGATCACATCAAAAAAGCGGCGGCGGAAATAGGCCCTTTAGATGTGAAGTTTGTTCCAAGGACTTCATTTGTAAAGGGCATTTGGTGTCGCATCAGCGCACTCACGCGGCAACGGGCGAGACTGTCAAGAGTGAACAAGCGGCCGAGGTGGAGCCGTGTGGCGACTGCGACAAGGACATCACCGACCGCGTTGAACGGAATCCGGACGTCAgagcAACTAATGATAATAGAGCAACGGAAGAAGAGGTGAATCAAAACCAGCAGAATAATACTATTATGCAAATTACTAGCCAGGTGCGTACCGTATCCGGAACAAGCGCGAGCAGTGTAACAACCTTCACGCACAGCACGAGCTCGCAGCACCACGCCGGCAACCCTATCTCCCATCACCCGGTCACTGTCAACTACTAG
Protein Sequence
MNPEHHNINTGGGQPPGNSEPQNQRVTAGPQQQQQQQQPANSLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTNTRLENGKPVQELGQGHTGLLNGDPNIILSQHGGQTQLSVSGPGGQQIPVTQIIATQLQSGQAHESLVAHSQQQDLGTQQNSGNGNQVSVATGQPSHQQVPNSRVEYIQHHSIDMGHHSQQHSLQQQLMETRSLLPQANPLTSRYPIVGRGHHSQQHSLQQQLMPTSRPDHANQQIQLTVSEDGIMTVVEPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTHNPDGTTSIETSASEHVKDEKNVSKLESAQFAIPTDIKDIKGLDLKNVGPMGMEGAVVKISAGASEHDLHAMYKVNVDDLSQLLAYHEVFGKLNPEGQQQAKVITEVEVEAGTSAAISENDSSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGTAFANAMELSRHGKCHLAGDPAERQTKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKNFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSFCSKSFTRREHLVNHVRQHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVTPRSYRRLSYSVKTAPYMSLAKYVKSVHNTISIKSECTLLRRQHTGETPHKCTYCPRTFARKEHLINHLRKHTGDMPHPCSYCNKKFTRKELLVNHVRQHTGETPFKCTFCTKAFSRKEHLTNHVHLHTGETPHKCPFCTKTYSRKEHLTNHVRMHTGESPHRCEFCEKTFTRKEHLINHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRAHNCGERPFSCGECGKSFPLKGNLLFHERSHQKSGGGNRPFRCEVCSKDFICKGHLVSHQRTHAATGETVKSEQAAEVEPCGDCDKDITDRVERNPDVRATNDNRATEEEVNQNQQNNTIMQITSQVRTVSGTSASSVTTFTHSTSSQHHAGNPISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01157022;
90% Identity
-
80% Identity
-