Basic Information

Gene Symbol
DMRT2
Assembly
GCA_029286785.1
Location
JAGSMX010000014.1:1709913-1716256[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-26 2.4e-22 78.9 11.9 1 47 20 66 20 66 0.99

Sequence Information

Coding Sequence
ATGCAAAACGAAGGTAACAGTGAATTGGACATCAGTAGTGTCGCCAGGAAGGCTTTGCGAACGCCGAAATGTGCCAGGTGTCGCAATCACGGGGTGATATCGTGTCTTAAGGGGCACAAGCGGTTATGTCGATGGAGGGACTGTCACTGTCCTGGCTGCTTGTTGGTGCTGGAGAGGCAGAGAGTTATGGCGGCACAGGTGGCTCTCCGACGACAACAAGGGGCAGGTTCGTCGCGAGGTAGTGAAGCGGCGGCATTAGCTGCTCGCAAGAAAGCGTACCGAGCTCGTTTACGGTGCATGCAAATGTCTCGATCTTACCCAGGGCCGCCACTACCCTATGGCAACATTAGACTGTTCGGTGGCGACGCGGCTTGGAATGAACGTGTGCGCAGGCGGAAGGCATTTGCAGACGCAGAGCTGGAGCGCGAGGTGCCACCTGCGCTGACGGAGCCCGCGCCTCCGCCCGCCGCCATGCTGTGCTCTCATCTCCTAGCGGCCATACTCACAAACTATGGACCCCTGCCCTCATCGCAACCTCCGCCTCGTCCAAAAATATCATTCTCTATCGATTCTATTATTggtgtcaaataa
Protein Sequence
MQNEGNSELDISSVARKALRTPKCARCRNHGVISCLKGHKRLCRWRDCHCPGCLLVLERQRVMAAQVALRRQQGAGSSRGSEAAALAARKKAYRARLRCMQMSRSYPGPPLPYGNIRLFGGDAAWNERVRRRKAFADAELEREVPPALTEPAPPPAAMLCSHLLAAILTNYGPLPSSQPPPRPKISFSIDSIIGVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01402761;
90% Identity
-
80% Identity
-