Basic Information

Gene Symbol
CDC5L_1
Assembly
GCA_029286785.1
Location
JAGSMX010000017.1:4144570-4152470[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-17 3.8e-14 52.9 1.8 2 46 9 54 8 54 0.97
2 2 3.8e-12 4.4e-09 36.7 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCACGAATTATGATAAAAGGCGGCGTTTGGCGCAATACAGAGGATGAAATTCTCAAGGCGGCTGTTATGAAATATGGGAAAAATCAATGGTCTCGAATAGCTTCCCTGTTGCATCGCAAATCAGCCAAACAATGCAAGGCTCGTTGGTACGAATGGTTGGATCCCagcatcaaaaagacagaatgGTCAAGGGAAGAAGACGAAAAGCTACTACACTTAGCGAAACTGATGCCAACCCAGTGGAGGACTATAGCTCCTATTATTGGCCGAACAGCTGCACAATGTTTGGAGAGATACGAATACTTATTAGATCAAGCCCAAAAAAAAGAGGAAGGAGAAGACATGGGAGATGATCCACGCAAGTTGAAGCCTGGAGAAATTGATCCTAACCCGGAAACAAAGCCAGCCAGACCAGATCCCAAGGATATGGATGAAgatgAGCTTGAAATGCTGTCAGAAGCCCGTGCCCGTCTGGCTAATACACAAGGGAAGAAAGCAAAGAGGAAGGCCAGAGAAAAGCAATTGGAAGAAGCACGAAGGCTTGCTGCACTGCAGAAGAGAAGGGAACTTAGTGCTGCTGGTATCTCAGTGCCAATAAGGCGGAAGAAGAAACGAGGTGTGGACTACAATTCGGAAATTCCATTTGAAAAAAAGCCTGCAGCTGGTTTCTATGATACATCCACAGAAGAGGTGGACCCAATGGCGCCTGATTTCTCTCGTCTTCGTCAGCAACATCTTGACGGAGAACTGCATTCAGAAAAAGAAGagAAAGAGCGCAGGAAGGATAAGCAAAAACTGAAACAACGTAAGGAGAATGATGTGCCACAAGCTATGCTGCAAGGAGACCAACCAGCTCGGAAACGCAGCAAGCTAGTGCTTCCTGAGCCTCAAGTTTCTGATCAGGAGTTGCAGCAAGTAGTAAAGTTGGGACGGGCATCGGAAGCTGCACGTGAATCCGCTGGAGCAGCGGGCGCGGCGACAGACGCTCTTCTAGCCACGTACGCTCTCACTCCGGCACCGGCCACCGCTCTACGTACACCTGCACACCAGGATCGaatccTAATGGAAGCCCAAAATGTGATGGCCCTGACACACGTAGACACCCCACTGAAGGGAGGACTCAATACTCCTCTTCACGAGTCTGACTTCTCGGGAGCTTTGCCGCAGGCGCAGGCAGTCGCAACGCCTAACACGCTTCTCGTCACCCCCTACAGATCATCCCGCAGTGAAGTATCCACTCCTGGCAGTTTCAACACACCTAGTCAAGGACAGACAGGACAACCTGGATTAACTACTCCTGCACTCCGAGATAAGTTGAGCATCAACCCTGAAGATCGTGTAGGACCTGGCGATACTCCGCAACTTGCTAATCAGATGCAAAAACAGTTGAAAGCTTCAGTTCGCAACGCTCTACAATCTCTGCCAACCCCTCGCAACGACTATGAGATAGTCGTTCCAGACGAGAGTGATGAGTCCATGGAGACGTCCAATGCAATGGACAGCATCGAGGACCAAGCCGATGCTGACGCGCGGATGATAAGGGAGCAAGAAGAAAAacGTGCGGCGGCGTTGGCGTTGCGTTCGACTGCGGTGCAACGCGGCTGCGTGCGTCCGGGCGACGTGAACGCGGCCGTGCTGCGGGGCGGCGGCGCACTCAGCTCGCTGCAACATGCTGAAGAGGTGCTCAAGGCCGAGATGCTCACCATGCTGCACTACGACGCACTGCACGACCCGCCCAACGGTATAGACAAAAAGCGATCGGTTCAATTACAAGCTTCACATTTGGCGTACCTAGAACAACATCCATATGAAGATTTCACCTCTGAAGAGTTAACACAGGCGAAACAGCTGTTGCAAAAGGAAATGGAGGTGGTGAAAGCGGAATGA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGISVPIRRKKKRGVDYNSEIPFEKKPAAGFYDTSTEEVDPMAPDFSRLRQQHLDGELHSEKEEKERRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVSDQELQQVVKLGRASEAARESAGAAGAATDALLATYALTPAPATALRTPAHQDRILMEAQNVMALTHVDTPLKGGLNTPLHESDFSGALPQAQAVATPNTLLVTPYRSSRSEVSTPGSFNTPSQGQTGQPGLTTPALRDKLSINPEDRVGPGDTPQLANQMQKQLKASVRNALQSLPTPRNDYEIVVPDESDESMETSNAMDSIEDQADADARMIREQEEKRAAALALRSTAVQRGCVRPGDVNAAVLRGGGALSSLQHAEEVLKAEMLTMLHYDALHDPPNGIDKKRSVQLQASHLAYLEQHPYEDFTSEELTQAKQLLQKEMEVVKAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01143045; iTF_00922828;
90% Identity
iTF_00922828;
80% Identity
-