Lchi008311.1
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- cdc5l
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000062.1:3075652-3085135[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-17 3.6e-14 53.3 1.8 2 46 9 54 8 54 0.97 2 2 2.8e-12 4.2e-09 37.0 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAATAATGATAAAAGGCGGCGTTTGGCGTAATACAGAGGATGAAATCCTGAAAGCGGCTGTTATGAAATATGGGAAAAATCAATGGTCCCGAATAGCTTCTCTTTTGCACAGAAAATCAGCAAAACAATGCAAAGCTCGTTGGTACGAATGGTTGGATCCCAGCATTAAAAAGACTGAATGGTCAAGGGAGGAGGACGAGAAGTTGTTGCATTTAGCGAAGTTGATGCCAACTCAATGGAGAACAATTGCACCAATCATTGGACGTACTGCTGCACAATGTTTGGAACGCTACgaatatttattAGACCAAGCTCAAAAGAAAGAGGAAGGTGAGGACATGGGAGATGATCCTCGCAAATTAAAGCCAGGTGAAATTGATCCCAATCCTGAAACAAAACCAGCTCGGCCAGACCCCAAGGATATGGATGAAGATGAGTTAGAAATGTTGTCAGAAGCTCGTGCCCGTTTAGCTAATACACAGGGAAAGAAAGCAAAGAGGAAGGCACGAGAAAAGCAGTTAGAAGAAGCACGAAGGCTTGCTGCATTACAGAAGAGGAGGGAACTTAGTGCTGCAGGGATTGCAGTCCCGATGCGGCGTAAGAAGAAGCGTGGTGTGGACTACAATTCTGAGATTCCATTCGAAAAGAAGCCAGCATCGGGTTTCTATGACACATCCACTGAAGTTATTGATCCAATGGCACCAGATTTCTCTCGACTGAGACAGCAGCATCTTGATGGAGAATTGCATTCTGAAAAAGAAGAGAAAGAGCGCAGGAAAGATAAGCAAAAACTGAAGCAACGCAAAGAGAATGATGTGCCCCAAGCAATGCTGCAAGGAGACCAACCAGCTCGTAAACGCAGCAAGCTTGTGCTTCCTGAACCGCAAGTGACTGATCagGAGCTACAGCAGGTGGTGAAGTTGGGCCGCGCGTCGGAGGCAGCGCGCGAGTCTgcgggcgcggcgggcgcggccACCGACGCGCTGCTCGCCACCTACGCGCTCACGCCCGCGCCCGCCACCGCGCTGCGCACCCCCGCCGCGCACCAGGACCGAATCCTTATGGAGGCACAAAACGTAATGGCGTTAACTCACGTCGACACTCCACTAAAGGGTGGCCTTAATACTCCACTTCATGAATCGGATTTCTCTGGAGCTTTGCCGCAATCGCAAGCCGTGGCAACACCAAACACGCTGCTAGTTACGCCTTTTAGATCATCCCGCAGTGAGGTATCAACACCTGGTAGTTTTAACACACCCAGCCAAGGACAGACAGGTCAGCCTGGATTAACGACTCCCGCTCTTAGGGACAAACTTAGCATCAACCCAGAAGATCGCTTAGGACCTGGTGACACGCCCCAGCTCGCCAACCAGATGCAAAAACAGTTGAAAGCGTCAGTCCGCACGGCGCTGCTATCGTTACCAACGCCTCGTAACGATTACGAGATAGTAGTTCCGGAGGAGAGCGATGAGCCGATGGAAGCGTTGAGCGCCGCGGATGCAATCGAAGATCAAGCCGACACCGATGCTCGCATGGTTAGGGAACAGGAAGAAAAACCTAAGCATCCGGCTTTACGCATGTGA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPMRRKKKRGVDYNSEIPFEKKPASGFYDTSTEVIDPMAPDFSRLRQQHLDGELHSEKEEKERRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVTDQELQQVVKLGRASEAARESAGAAGAATDALLATYALTPAPATALRTPAAHQDRILMEAQNVMALTHVDTPLKGGLNTPLHESDFSGALPQSQAVATPNTLLVTPFRSSRSEVSTPGSFNTPSQGQTGQPGLTTPALRDKLSINPEDRLGPGDTPQLANQMQKQLKASVRTALLSLPTPRNDYEIVVPEESDEPMEALSAADAIEDQADTDARMVREQEEKPKHPALRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00957896;
- 90% Identity
- iTF_01143045; iTF_00957896;
- 80% Identity
- -