Mpay002956.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- foxn4
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000004.1:11475512-11482445[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-36 3.5e-33 114.0 0.1 2 84 303 386 302 390 0.93
Sequence Information
- Coding Sequence
- ATGGATCTATACATAACCGATTCACTCCAGGACATGCTGGACATGGATATCAAAAACGAAATAGCAACAGATTTAAGCAGTATCACAGATTTTCCTGATTCGCTAGGATTAAATTTCTCAGAATTGCCACCATTATTGGACATGGACACAGATAACTCGGTAACATGGCTAAACAACTCATCTAGTTTCGTTCACAATTTAGATTTATATGGTTCCGAGGCGAACGCCGTTATGGTCAATCCAAATTCCGTAATGCCTTCGACCTTCGCGGAAACACCGGTCAAGAATATCGTTAAGGAAGAAGCATCAAATTTACTTCTAACATCAGCGGCAAGTAACGACACAAACACCAGCGCAGCACTGGCGAGCCCTAAAGAGGAAAAAAGCCACCTCACCTTTTCTCCGAACGCAATAAAAGTGCCTAAAGTAAAAGAGTCCGAAGAACCTAAACACAAGAAAACATTAGAAGAAGCAACGCAAATGTTGATATACGTGCGGAAACAAGACAAGAATGTAGTGAAGGATTTGCTTAAAGATCTAGACACAGATACAATTAAGACCAAAACGTTGGCATCATCGACGCCGACAGTCCGCATTAAAGCGTCGCAATCAGAACTGATCAAGTTGAACCCTAAAAATTGCTCAATATTGAACACTAGTCAAAAGATGACGCAACAAATTGGCACCAAAACGATAATCTCCGGTAATATACACATTTTGGACGCTCAGCAATCTAGGACAATTTTAGCGAATGGCAACAAAAGTCAAGCGACCATCCTGATAGACAACTCGTTAGGCAACAGTAGACAAATTATCAAGACGGCAGTGAACGGTTCATTTAAATTAGACACTAGCCAAGCTAAGTTTTTAAATACTAGCAGCAAAGCCAGCGTGGGTGAATTTCCAAAGCCCGCTTACTCTTATTCGTGTTTAATAGCAATGGCGCTAAAGAATTCGCGAACAGGAAGTTTGCCTGTTTCCGAGATCTATAATTTTATGTGTCAACATTTCCCATACTTCAAAACAGCGCCGAGCGGATGGAAGAATTCGGTGCGACACAATCTTagcttaaataaatgttttgaaaAGATTGAAAAGCCTTCAACAAATGGAAGTCAAAGAAAGGGTTGCTTATGGGCTATGAATCCGTCGAAAGTTGGAAAAATGGACGAAGAAGTTTTGAAATGGTCACGAAAAGATCCACAGGCCATTAAAAATGCTATGGTCTATCCAGATAGCTTAGAAGCGTTGGAGAGAGGCGAGATGAAGTACAGCGGGTTCGCGAGCGATACTGAGGCGGAAGACGACGTGGATCCCGACGCCGACGTTGAACTCGACACGGACCTCGAAATAGATCCAGAGGTCAAAGAGGAAGTCGAAGAAGAAGAGACAGTGATAGAACAAGAGGCATCTGATCAGGAGCTAGAAGTGGAGGAGGTGGTTGAAGGCACTGGGATGGTTGGAGGCACATACCGTCTGCTTGCGACTGGATCATCCTCCCTCGCTTCTTACGTTACTGACATTGAATCGAGCGAAGAAGTTAGTGACATAGAAGTGTTGGACCATTCTTACGAAGAAATCGATATCGATGTAACGAAGCCCGTAAAACTCGACGTATCGATGACGGAGAATTATTCaaTACATTCAGCAAAGAGAGCGAAGACAAGTTACATCTATCAACCAGTGACGACATCTACGCACACGAGCAGACGAAAAACACCTCTCGTGAACAGAGTGGCGTTGATTTAA
- Protein Sequence
- MDLYITDSLQDMLDMDIKNEIATDLSSITDFPDSLGLNFSELPPLLDMDTDNSVTWLNNSSSFVHNLDLYGSEANAVMVNPNSVMPSTFAETPVKNIVKEEASNLLLTSAASNDTNTSAALASPKEEKSHLTFSPNAIKVPKVKESEEPKHKKTLEEATQMLIYVRKQDKNVVKDLLKDLDTDTIKTKTLASSTPTVRIKASQSELIKLNPKNCSILNTSQKMTQQIGTKTIISGNIHILDAQQSRTILANGNKSQATILIDNSLGNSRQIIKTAVNGSFKLDTSQAKFLNTSSKASVGEFPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPSGWKNSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVLKWSRKDPQAIKNAMVYPDSLEALERGEMKYSGFASDTEAEDDVDPDADVELDTDLEIDPEVKEEVEEEETVIEQEASDQELEVEEVVEGTGMVGGTYRLLATGSSSLASYVTDIESSEEVSDIEVLDHSYEEIDIDVTKPVKLDVSMTENYSIHSAKRAKTSYIYQPVTTSTHTSRRKTPLVNRVALI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01147233;
- 90% Identity
- iTF_01158530; iTF_01153670; iTF_00840139; iTF_01156102; iTF_00197194; iTF_01157482; iTF_01495601; iTF_01129873; iTF_00249534; iTF_01494880; iTF_01154834; iTF_00922715; iTF_01402560; iTF_00204191; iTF_01337592;
- 80% Identity
- -