Basic Information

Insect: Mayetiola destructor
Gene Symbol: Hr39
Assembly: None
Location: GL501415.1:390595-393535[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.2 1.3e+04 -4.5 6.9 51 136 146 232 33 251 0.52

2 4 2 2.2e+04 -7.6 16.3 87 171 250 334 195 408 0.51

3 4 3.5e-08 0.0004 20.2 0.1 1 20 498 517 498 521 0.94

4 4 1.8e-75 2e-71 241.9 0.9 201 408 592 816 536 816 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.2	1.3e+04	-4.5	6.9	51	136	146	232	33	251	0.52
2	4	2	2.2e+04	-7.6	16.3	87	171	250	334	195	408	0.51
3	4	3.5e-08	0.0004	20.2	0.1	1	20	498	517	498	521	0.94
4	4	1.8e-75	2e-71	241.9	0.9	201	408	592	816	536	816	0.85

Sequence Information

Coding Sequence: ATGGCAACATCGGATGGATGTAGTACAGTGGCATCATCAACAGGCGGAATACGCACAAATATTTCAGTTACAAATATTAATTGCACAAATACATTATCCACAATGCCATCGTCAATAATATTAGCATCATCGGATGCATCCATTTCATCACCAACATTATCCTCAACAAATGAGAACAATATTGATATAACAAACGGTGCCAACGGAATCGCAACCAATTCAATTGAAAGCAATACACCTGCAATCAATGATTCTTCTTCGCATACAGTTAGCAATAATAATAATAACAACAATCAATCGCATTTTTATGGAAATGGTAGCATAAGAATAGCCGTACCAAAAATGGAAGAATCCGATGAATCTGACACAGAATTGTCACAAATTGAAAGTACAGCAACAGCTGCAGTTAGTATGCGAACCAGCGTCAATACTAAAGACACACCGCGCCCAATGTCATGGGAAGGTGAATTGTCTGAAAATGACGATCGAATGGAAACCGAAACAACAAGTTCAAATTCCAAGCCAACGGTTGCAGAAAATCAAGTGTCGTCGGTGTCATCGAATGGTAACTGTGTCGTCGGATCGATAGCTTCATCGGTCGATTTGGCTGTTGACACAAATCAAAAGAAATTTATAACGACAAAAAATGAAATTAAACCGGAATTCAATGATTACAATCACAGCAATCGAAAAAATACTACAAATCACCTATCGAATGCACTTTATGGCAATAGATCATATCCATTGGATATGTCAAATATGAAATTTGAAGCCAATTCACAGCCACAACAATCGACAAATCAATTTGTGCAACAACAACAACAACAACAGCCGCACCAATCAAATCAAGGTGATGTCAATTCACCGTTGCTCATACGATCGAAAACAAACAATTTATTGCCAACAAATCCAAGTCCCGATTCGGCCATTCATTCAGTTTATACGCACAGTTCACCGAGTCAATCGCCATTAACGTCACGTCATACACCATACACACCGTCACTTAGCCGAAATAATAGCGATGCATCGTACAGTAGTTGCTATTCATATAGTTCGGAATTTAGTCCAACGCATTCACCGATTCAGGGACGACATAATATGTATATCGGTAGCAATTTTAATGGTTCACCGCTACATCATTCGGTACTTTATAAACCAATGATTGACGGCAATGAAAATACAAAAATATTACAGCATCAACAATCGAATGAATCGGAAAGTGCTCTTGAGCCGGAAATAATACCGTCAGCGGGTATTTCACGGCAACAATTAATTAATAGTCCATGTCCAATTTGTGGTGATAAAATATCTGGTTTTCATTATGGGATTTTCTCATGTGAATCATGTAAAGGTTTTTTCAAACGAACGGTACAAAATCGAAAGAATTATGTGTGCTTACGTGGTGGCCCATGTCCGATAACAATTGCAACGCGAAAAAAGTGTCCAGCCTGCCGATTTGAAAAGTGCCTACAACGTGGCATGAAATTAGAAGCAATACGTGAGGATCGTACACGAGGTGGACGATCAACATATCAATGCTCGTATACTTTACCCATGTTAAGTCCATCACTGGTCGATGGCACTTTATTGATATCAAACAATCGATGTAAAACTATTAATCAACAAGAAATCACAAACGATGCAAATAATTTAGCAACAAAACAAAGCATTCCGACTCTATTACAAGAAATTATGGATGTTGAACATCTGTGGAAATTCAATGAGGCCGAAATCAACAAATTAAATCAAAATCAACTGAACGGAAGCAGTGGTAATCATCGAAGTGATGGAGCTGGATCATCGTCAGCAACTTTGGCTACAAATCCTTTACTTGCCGGCCTTGGTAACGATGAAGACACAAATCCAGATCTGATCGCTAATCTATGCAGTGTTGCTGATCATCGTCTTTACAAAATTGTTAAATGGTGCAAAAGTTTGCCGCTTTTTAAAAATATTTCGATCGACGATCAAATTTGTCTGCTAATTAATTCCTGGTGCGAACTATTATTATTCTCCTGTTGTTTTCGTTCGATTTCATCACCGGGTGAAATTCGTATATCACAAGGTAAATCAGTCAATTTAGAACAGGCCAAGACGAGTGGACTTCAGCAATGCATTGAACGAATGCTCAATTTGACGGACCACTTGAGACGATTACGCGTAGATAAATACGAATATGTGGCAATGAAAGTGATTGTTCTCCTTCAATCAGACACATCTGATTTAAGAGAGTCGGAAAAAGTTCGCGGTTGTCAAGAGAAAGCATTACAGGCGTTGCAATCATATACATTGTCACATTACGGAGATGCACCGTCCAAGTTTGGTGAATTGTTGCTACGGATTCCGGAACTTCAACGAACCTGTCAGGTCGGCAAAGAGATGCTAACAATTAAATCAAAAGAAGGAGCTGAATTTAATTTGTTGTTGGAACTTTTGCGTGGTGAACACTGA
Protein Sequence: MATSDGCSTVASSTGGIRTNISVTNINCTNTLSTMPSSIILASSDASISSPTLSSTNENNIDITNGANGIATNSIESNTPAINDSSSHTVSNNNNNNNQSHFYGNGSIRIAVPKMEESDESDTELSQIESTATAAVSMRTSVNTKDTPRPMSWEGELSENDDRMETETTSSNSKPTVAENQVSSVSSNGNCVVGSIASSVDLAVDTNQKKFITTKNEIKPEFNDYNHSNRKNTTNHLSNALYGNRSYPLDMSNMKFEANSQPQQSTNQFVQQQQQQQPHQSNQGDVNSPLLIRSKTNNLLPTNPSPDSAIHSVYTHSSPSQSPLTSRHTPYTPSLSRNNSDASYSSCYSYSSEFSPTHSPIQGRHNMYIGSNFNGSPLHHSVLYKPMIDGNENTKILQHQQSNESESALEPEIIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGGPCPITIATRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPMLSPSLVDGTLLISNNRCKTINQQEITNDANNLATKQSIPTLLQEIMDVEHLWKFNEAEINKLNQNQLNGSSGNHRSDGAGSSSATLATNPLLAGLGNDEDTNPDLIANLCSVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISSPGEIRISQGKSVNLEQAKTSGLQQCIERMLNLTDHLRRLRVDKYEYVAMKVIVLLQSDTSDLRESEKVRGCQEKALQALQSYTLSHYGDAPSKFGELLLRIPELQRTCQVGKEMLTIKSKEGAEFNLLLELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00957089;
90% Identity: iTF_00957089;
80% Identity: iTF_00957089;