Mdes013038.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- REL_1
- Assembly
- None
- Location
- GL501485.1:1175774-1177630[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-09 6.6e-06 26.5 0.0 2 70 8 71 7 81 0.89 2 2 1.5e-09 4.8e-06 26.9 0.0 132 169 90 128 72 128 0.79
Sequence Information
- Coding Sequence
- ATGCTGTCCGTAGACATGGCTGAAATCGTTGTGGAACCAATAAAGTTCTATCGTTTTCGTTTTGCAAGTGAACGCAAAGGAAACACAAAATTTCCAATCAAAGGAGCTAACAAATCATTTATAACATTAAAAGTGAACGATTTCCAGGGAGAATTCAGAGTAACGGTGTCATGTGTTACCAAAGATCGATATCAACAGCATCCATACCGCTTGAAAGATGAACGGAAAGTGAATGAAATTGATCCATTTAATAGAGGCTTCGATCCAATAGAATTTGACAAAAATTGCGTTCGTCTCTGTTTTCAAGTATTCTTGCATGACATAAGGACTGGCAAACCTCTCAACCCTCTTCATCCAGTCGTCTCACAACCAATTCACAATAAAAACAATTTGGTGATTTCAGAATTAAGTGAACGTAGTTCAGCAGTTGCGGGCAATGAAAGACGAATTTTACTATGTGGACAGGTTCTCAAAAATGACATCGAAGTCCAATTCCTTAAATTGAATGAAAAAACCGGTAAAATAGATTGGCAAGAAAATGCAATAATTGATTACATTCATAAGAATGTGGCTATTGTGTTTAGAACTCCACGGTATCCTCTTCCATGTACGCCAGATGTCCATGACAATGGATCAATCAAGTGTTTTATACAGCTGTATTGTCGATCTGATGAATGTACAAGTGAACGTTTGGAATTCGAATATTATTATGAACCGGAAAGAGTGAGAAAAATAAAACGTCTGGATACAAATGTTGCTGCACATTTTTCAAACAATCCATTGGCAAATGAATCTGATTCAACATATTGCCGTCCGTCCACAAGTCAAGCGATTCATGCGGCAAAAACAGTTTCAAATCCATTATTAAATCAACCCGTTTCCAAAGCCGAGTCCATGGACAATACGGCTCGCATTCAAACTACCGCACCAATTGATTCTGTGTATTCCGATTCGGATAGTTTTGATAGTATAAGCAGTTATCACGTTCCATTAGATGACATAATACCGTTCGACCCAAACAAATTAGATAACAATTAA
- Protein Sequence
- MLSVDMAEIVVEPIKFYRFRFASERKGNTKFPIKGANKSFITLKVNDFQGEFRVTVSCVTKDRYQQHPYRLKDERKVNEIDPFNRGFDPIEFDKNCVRLCFQVFLHDIRTGKPLNPLHPVVSQPIHNKNNLVISELSERSSAVAGNERRILLCGQVLKNDIEVQFLKLNEKTGKIDWQENAIIDYIHKNVAIVFRTPRYPLPCTPDVHDNGSIKCFIQLYCRSDECTSERLEFEYYYEPERVRKIKRLDTNVAAHFSNNPLANESDSTYCRPSTSQAIHAAKTVSNPLLNQPVSKAESMDNTARIQTTAPIDSVYSDSDSFDSISSYHVPLDDIIPFDPNKLDNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -