Mdes000465.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- RELB
- Assembly
- None
- Location
- GL502461.1:65626-67469[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-07 0.00081 19.7 0.3 1 21 5 25 5 28 0.94 2 2 2e-20 6.3e-17 62.4 0.2 49 168 27 144 25 145 0.89
Sequence Information
- Coding Sequence
- ATGAAGCCAACAGTTAAAATAATTGAACAGCCAGCTGAACGTTCGTTTCGTTTTCGGTATATTAGTGAGGGCCGTTTAAAAGCAGTGATTGTTATAAGTTGCGTTTCGGATACAAAGCCATATCGTCCACATCCGCACAAATTAACATCAGAAAATGGTGGATGCTATCAACAAAGTGTGAATATTTCTGGATCAAAAACCATCGAATACAAGGACATCAATATTTTATTTACGAAAAAGAATGATATTGTGGCATCGTTAACCGAACGAAAAGCGAAAAATATTGATCCATATGAAAATGGATGGGATCATATGAAATCGCCACAATCAATTAATTTACATGCAGTTCGATTATGTTTTCAAGTGATTTTCTTAAAAGATGATAGAACAGTGGCGGCCAAGTGTACAATGGTGACCAATTCGATTAAAGATAAAAAGAAAAGTGAACCGCCAAAAATTCATGAAATTAGTGCAACAACATCTTGCATTTCGGGTGGCGAACGAATTATGCTATTTTGCGATAAAGTTCAAAAAGATGACATTTGGATTGTATTCTACGATGAAAGCAGCGATTGGAAACATGAATTGACAACAATGAAAGTACATCATCAATATGGAATTTCATTTCGAACCCCACCATACAAAGAAATCGATATGTTTGAAAGGAAAACAGTATTTATGAAACTTTATCGTCCATCGGATCAAGAATCAAGCAAATCAGTATCGTTTGAATATTATACTCGTTCCGAACAAAGTACACAATTGATACACAAAGCAGCACCCAAACGCCATAAAAATCTCTTTCCAACAGAGAACAAATTAATCCGGCCAACCGAATGCGCAAAGCCATTGAATGAGCAAAATGATCAAAACCATCGTCCAAATATAACGTCCATTTTATTGAGGGAAATCCATGGAGTTAAAGATGAACCTCAAGTTGAAAAAGAAAACAATCGGCCAAAACCAACGATAGACGAAATATTATCATGTTCAACAACAAATGCGTATCGAAATTCCGGAAACAATGTTCCGGGCGACTATGATCAAAATCAATTCAACCAACAACAACAACAACAACAACAATATCCAGTTTATAATGGAATGTACAGAGATCCAATGTCTCTGAACAATCATCATATGATTAACATGCAACAGCCATGTCCATCAAATACAAACAATGAATATCAATCCAACCATAATAATTATTATCAAAACACAAACATTGGTGATTTGTATCCAATTAATTCACCGATGCAATGTTATACTCCAATACACAATTATAATCATATTCCGGATGCTCAGCCAATTTCTCCAAATACAAATCATGGCTATCAAACGAATGATAATAATTACCATCCGGGAATGAATGCTAATAATCTAGGATCAGGTATGGAAAATCCATACACATCTCAACCAAATGTTCCAGTTTATAATGCGGCCGACAATTTTAATTCAAAACCAATTCCAAGTTCGTCTTTGTCTCGCATTCTCGATGATATCCAGTACGGAGACATAGATGATATGGTGACAAGTATGGAAAAATTTGATTTACAAGATATTGATGAAATAAATGCTCCTCTTTAA
- Protein Sequence
- MKPTVKIIEQPAERSFRFRYISEGRLKAVIVISCVSDTKPYRPHPHKLTSENGGCYQQSVNISGSKTIEYKDINILFTKKNDIVASLTERKAKNIDPYENGWDHMKSPQSINLHAVRLCFQVIFLKDDRTVAAKCTMVTNSIKDKKKSEPPKIHEISATTSCISGGERIMLFCDKVQKDDIWIVFYDESSDWKHELTTMKVHHQYGISFRTPPYKEIDMFERKTVFMKLYRPSDQESSKSVSFEYYTRSEQSTQLIHKAAPKRHKNLFPTENKLIRPTECAKPLNEQNDQNHRPNITSILLREIHGVKDEPQVEKENNRPKPTIDEILSCSTTNAYRNSGNNVPGDYDQNQFNQQQQQQQQYPVYNGMYRDPMSLNNHHMINMQQPCPSNTNNEYQSNHNNYYQNTNIGDLYPINSPMQCYTPIHNYNHIPDAQPISPNTNHGYQTNDNNYHPGMNANNLGSGMENPYTSQPNVPVYNAADNFNSKPIPSSSLSRILDDIQYGDIDDMVTSMEKFDLQDIDEINAPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -