Mdes013039.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- Rel
- Assembly
- None
- Location
- GL501485.1:1180782-1181906[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-26 3e-22 79.7 0.7 1 103 10 104 10 111 0.94 2 2 8.4e-06 0.027 14.8 0.0 127 168 106 146 101 147 0.80
Sequence Information
- Coding Sequence
- ATGGACTATATATTTAGCCCTATCGAAATAAAAATCGTTGAGCAACCACAAAATCGAATTCGATTCAGATACGAGTCAGAGAAACATATTGATTTGTTGAAAGGAGCAAACAACACTTTTATAACAATAAAAATTGAAAACTATATTGGCCGTGCCCAAATTAAAGTATCTTGCGTTCAAGCTGATTTAAATGAAAAGCATATTCATACTTTGAAAGGTACAGAATGTAAAGATGGTGTTTGTGTCAGGGATATCGAGCCTCCAGAAATGACCATATCTTTTACTAATATCGGAATTCAACGTTCGAAATTGGATAAATTTTCGAAAGCGAATAACATTGATCCACATGTTGTTCGGTTATGTTTTGAAGTATTTTTGTTGGATGATAATTTGAAGGGATTATCATCCCTCAAAGCTTATTCTTGGCCAATTTATAATGCCAAATCTACTAATGGTGGGAAACTTCAATTGATATTGAATATGAATAAAAAGAATATTTTTGTTGAAATCGGAGATGAATACAATTGGAAAACAAGCGTTCATATTGATCGAGCTGAAATTCATAAGGAAGCCGTTGTACGATTTTTAATGCCACCATATCAATATAAGGAAATCCATGCTCCAGTCAAGGTGGAAAACTATCTATCGGAAATGCAGGCCAGCAATCCATTGGAATTTGAATATATACCCAATCAATTATTATCACATTATGCGTACGCATCAGGCTAG
- Protein Sequence
- MDYIFSPIEIKIVEQPQNRIRFRYESEKHIDLLKGANNTFITIKIENYIGRAQIKVSCVQADLNEKHIHTLKGTECKDGVCVRDIEPPEMTISFTNIGIQRSKLDKFSKANNIDPHVVRLCFEVFLLDDNLKGLSSLKAYSWPIYNAKSTNGGKLQLILNMNKKNIFVEIGDEYNWKTSVHIDRAEIHKEAVVRFLMPPYQYKEIHAPVKVENYLSEMQASNPLEFEYIPNQLLSHYAYASG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -