Mbor013077.1
Basic Information
- Insect
- Marronus borbonicus
- Gene Symbol
- nfxl1
- Assembly
- GCA_902655005.1
- Location
- LR737399.1:2972371-2983350[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.9e+04 -7.8 5.6 15 19 162 166 161 166 0.81 2 18 0.46 4.3e+03 -2.1 0.9 4 10 197 203 197 203 0.91 3 18 3.1e-08 0.00029 20.9 16.4 1 19 211 228 211 228 0.99 4 18 3.2e-05 0.3 11.2 15.7 1 19 264 282 264 282 0.95 5 18 2 1.9e+04 -4.4 2.3 6 10 307 311 306 311 0.89 6 18 5.1e-06 0.048 13.8 13.6 1 18 317 334 317 335 0.92 7 18 1.1 1e+04 -3.3 0.7 5 10 359 364 359 364 0.91 8 18 2e-05 0.18 11.9 12.5 1 18 370 387 370 388 0.98 9 18 0.36 3.5e+03 -1.7 0.3 1 5 397 401 397 401 0.95 10 18 5.5e-05 0.52 10.5 17.1 1 18 422 439 422 440 0.94 11 18 1.6e-10 1.5e-06 28.2 12.6 1 19 449 467 449 467 0.98 12 18 0.00012 1.2 9.3 5.6 10 19 516 525 513 525 0.89 13 18 0.011 1.1e+02 3.1 5.1 1 12 535 545 535 545 0.89 14 18 2 1.9e+04 -6.9 4.5 14 18 573 577 573 577 0.86 15 18 1.1e-05 0.1 12.7 4.8 1 11 614 624 614 629 0.89 16 18 0.00012 1.1 9.4 15.8 3 19 655 671 654 671 0.94 17 18 1.6e-05 0.15 12.2 11.5 1 16 714 728 714 734 0.87 18 18 1.2 1.1e+04 -3.4 0.8 5 10 763 768 763 768 0.86
Sequence Information
- Coding Sequence
- ATGAGTGATTTTAGAAGGAGACAAGCAAAACCAAGGAATCCTTGGACCATAACACAACCCCAAAAATTGGATGGTAGTCAAAATGGGAGTCGAAGCTCTGACAGATTCACAGAAGCTTCGAAAAAACATCAGGCAGCTGCACAGAAATATGTTCTGGATTATGATTCATCTTCTGAAGAAGATGAATTAGAATCTGGAAATATTATTAagattattttgaaagaatatacatCTACCGGTGTcgaattgaataatttgaaaagaacaaaaggcTATCTTGAGGATGCGTTTGTATCGGGAGCTGCTACTTGTCTAATTTGCATATCTCACATCAAGCGTAATGATGCTaTATGGAATTGTAATGAATGTTACtgtagttttcatttaatgtGCGTTCAGAGATGGTCAAAAGATACTATTTTTAATCAGAAGCAATTGTCTGAAGAACATAcacatgtaaaaaatataaagattggtTGGTGTTGTCCAAAATGCCGACAGGAATATACTCCAAATGACATTCCCACTGAATATagatgtttttgtaaaaaggcTGTAAATCCAGCATATCAGTATTTACTAATACCTCATTCGTGTGGTAATACTTGTCGCAAGGAACTGAAACCAAAATGTGGTCATGAATGCATATTACTTTGTCATCCTGgTCCATGTCCACCTTGTCCAAAGATAGTTAATATTAGTTGTTATTGTGGCAGTCAACCTGCCAAACCTCAAAGATGCTCTAACAAGGAATGGTCATGCGGCTCTGTATGTAACAAATTACTAACTTGTAATAAGCACAAGTGTGCTCAACCTTGCCATCCAGATGAATGTGAACCATGCCCTAAAAAGAGCATACAAAAATGTCTATGCGGCTTAAACCAAAAGCTCAGAGATTGTGCTTCACCAATATGGCAGTGTGAGAAGaaatgcGACAAACCATTAACTTGCGACCACCACTACTGCTTAAAATCTTGTCATTCTGGAGATTGCGGTCCATGTGAACTTTCAGAGCTTAGAACGTGCCCATGTGGTAAATCAACATATCAGTTACCATGTACAGAAGATACTCCCACATGCGACGACACTTGCGGCAAACTTCTAGAATGTGGCCAACATATTTGCAATCAGAAATGCCACAAGGATACATGTGGATCTtGTGTGGAAATTGTTGTAAAGTCTTGCCGGTGTGGACTTCATACTAAAGAAATTCAATGTAAGAAGCAATACTTATGTGAAACGAAGTGTAAACAGATGAAGGATTGCAATAAACATCCATGTAACCGTAAGTGTTGCGATGGGAACTGCCCACCATGTGAGAAACCATGTGGGAAAACATTAAGCTGTGGAAATCATAAATGCGCATCTATATGTCATAGAGGTCCATGCTATCCGTGCCAGCTAACTGAAAATGTTTGCTGCCGTTGTAGTCAGACTTATCTGACAGTTCCTTGTGGAAGGAAATACAAAACGCGCCCACCGAAATGTCTTAAGTCGTGTTTgATCCCACCGGAATGTCATCATCCACGGCGCGAGAATCATCGTTGCCATTTTGGAGATTGTCCGCCTTGTCGACAAGTTTGTAGCAAAATACATGCCAAATGTTCACATCCTTGTCCGGCGTTATGTCATACTTCGGTCCTAGtaaaagtacaaacaaaaaagGCATCAATGCCTTGGGAGCAAGTAGCTcctattttagaaaagaaatcacTTCCATGTCCCGATTGTGTTATGCCAGTGCGCGTAACTTGTTTAGgAGAACACGACAACACAGATTTGCCCTGTTACATAGCTAAACCTTCCAGTTGTGGCAGGCCGTGTGGAAGAATCCTAAAATGCGGCAATCATACTTGTCAAATAGAATGTCATGTTATTGAAGGACCGCACGACATTGTTCGCGCTGGAGATAACTGCGACATTTGCACTAATCCTTGCACTAATCTTCAACCAGACGGATGTAATCATCAGTGTCCTAAACTTTGTCATCCAGATAGTTGCCCACCCTGTACACAAATGATTCGAATTAGGTGCCACTGTGGATTGAATCAACCATATGTTGCTTGCAAAGATTGGACAGGCACTGAAGATAAAGAAAAGTTACAAAGCTGCGGTAATCAATGCCCAAATAATTATGAATGTGGCCACAGATGCCGTTCTAATTGTCACTCGGGTCCTTGTGTTAGTCAGGAAAGTTGTAAGAAAAGGGTTAAAATGACTTGCCCGTGCAAACGCCTCAAAAAGGAGTTCCTTTGCGAATTAGTACGACAAGGTTGTCCAATGATCAATTGCGATGAAACctgtaaacaaaagaaagtagAAGAAGAGAAGCTAAAACAATTGCAGCTTgagcaaaaaaagaaagaagaagagattaaaaatcaaaaagaattgGAGAAATACGAAAAGATGTTCCATGGCAAAAAGAAGAATAGAGAACGTAAAGTTcacgaagaagaaaaaggaaaaggtttTCTCTCCGAATATAAAATTCCTATCTATTTCACTGTTTTTGGTATTCTTTCTGCTCTGATCTACGTTTATACTTACTAA
- Protein Sequence
- MSDFRRRQAKPRNPWTITQPQKLDGSQNGSRSSDRFTEASKKHQAAAQKYVLDYDSSSEEDELESGNIIKIILKEYTSTGVELNNLKRTKGYLEDAFVSGAATCLICISHIKRNDAIWNCNECYCSFHLMCVQRWSKDTIFNQKQLSEEHTHVKNIKIGWCCPKCRQEYTPNDIPTEYRCFCKKAVNPAYQYLLIPHSCGNTCRKELKPKCGHECILLCHPGPCPPCPKIVNISCYCGSQPAKPQRCSNKEWSCGSVCNKLLTCNKHKCAQPCHPDECEPCPKKSIQKCLCGLNQKLRDCASPIWQCEKKCDKPLTCDHHYCLKSCHSGDCGPCELSELRTCPCGKSTYQLPCTEDTPTCDDTCGKLLECGQHICNQKCHKDTCGSCVEIVVKSCRCGLHTKEIQCKKQYLCETKCKQMKDCNKHPCNRKCCDGNCPPCEKPCGKTLSCGNHKCASICHRGPCYPCQLTENVCCRCSQTYLTVPCGRKYKTRPPKCLKSCLIPPECHHPRRENHRCHFGDCPPCRQVCSKIHAKCSHPCPALCHTSVLVKVQTKKASMPWEQVAPILEKKSLPCPDCVMPVRVTCLGEHDNTDLPCYIAKPSSCGRPCGRILKCGNHTCQIECHVIEGPHDIVRAGDNCDICTNPCTNLQPDGCNHQCPKLCHPDSCPPCTQMIRIRCHCGLNQPYVACKDWTGTEDKEKLQSCGNQCPNNYECGHRCRSNCHSGPCVSQESCKKRVKMTCPCKRLKKEFLCELVRQGCPMINCDETCKQKKVEEEKLKQLQLEQKKKEEEIKNQKELEKYEKMFHGKKKNRERKVHEEEKGKGFLSEYKIPIYFTVFGILSALIYVYTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00434531;
- 90% Identity
- iTF_00627904;
- 80% Identity
- -