Basic Information

Insect: Marronus borbonicus
Gene Symbol: -
Assembly: GCA_902655005.1
Location: LR737389.1:3795589-3805974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4 3.3e+02 2.1 0.4 3 15 6 18 5 21 0.83

2 18 5 4.1e+02 1.8 0.0 2 22 311 331 310 333 0.87

3 18 0.0034 0.28 11.8 0.1 1 23 390 413 390 413 0.97

4 18 0.28 23 5.8 0.2 1 23 453 475 453 475 0.96

5 18 0.63 52 4.7 0.6 1 23 508 532 508 532 0.93

6 18 0.00051 0.041 14.4 4.6 1 23 535 558 535 558 0.96

7 18 0.017 1.4 9.6 3.8 2 23 565 587 564 587 0.94

8 18 0.012 0.95 10.1 4.0 1 21 691 711 691 712 0.95

9 18 0.00053 0.043 14.4 2.2 2 23 724 746 723 746 0.94

10 18 0.15 12 6.7 3.9 1 23 749 772 749 772 0.96

11 18 6.4 5.3e+02 1.5 3.4 3 23 775 798 774 798 0.88

12 18 3.2 2.7e+02 2.4 0.2 1 23 802 825 802 825 0.93

13 18 0.45 37 5.1 0.4 2 23 832 854 831 854 0.94

14 18 0.063 5.1 7.8 1.0 2 23 863 885 862 885 0.95

15 18 0.0019 0.16 12.6 0.2 2 23 891 913 890 913 0.95

16 18 9.5 7.8e+02 1.0 2.1 3 23 1069 1090 1068 1090 0.94

17 18 0.48 39 5.0 0.2 2 23 1097 1119 1096 1119 0.93

18 18 0.2 16 6.2 0.9 1 23 1132 1154 1132 1154 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4	3.3e+02	2.1	0.4	3	15	6	18	5	21	0.83
2	18	5	4.1e+02	1.8	0.0	2	22	311	331	310	333	0.87
3	18	0.0034	0.28	11.8	0.1	1	23	390	413	390	413	0.97
4	18	0.28	23	5.8	0.2	1	23	453	475	453	475	0.96
5	18	0.63	52	4.7	0.6	1	23	508	532	508	532	0.93
6	18	0.00051	0.041	14.4	4.6	1	23	535	558	535	558	0.96
7	18	0.017	1.4	9.6	3.8	2	23	565	587	564	587	0.94
8	18	0.012	0.95	10.1	4.0	1	21	691	711	691	712	0.95
9	18	0.00053	0.043	14.4	2.2	2	23	724	746	723	746	0.94
10	18	0.15	12	6.7	3.9	1	23	749	772	749	772	0.96
11	18	6.4	5.3e+02	1.5	3.4	3	23	775	798	774	798	0.88
12	18	3.2	2.7e+02	2.4	0.2	1	23	802	825	802	825	0.93
13	18	0.45	37	5.1	0.4	2	23	832	854	831	854	0.94
14	18	0.063	5.1	7.8	1.0	2	23	863	885	862	885	0.95
15	18	0.0019	0.16	12.6	0.2	2	23	891	913	890	913	0.95
16	18	9.5	7.8e+02	1.0	2.1	3	23	1069	1090	1068	1090	0.94
17	18	0.48	39	5.0	0.2	2	23	1097	1119	1096	1119	0.93
18	18	0.2	16	6.2	0.9	1	23	1132	1154	1132	1154	0.96

Sequence Information

Coding Sequence: ATGGAAACGAAGCTCTGCAGAATATGTGGAAAATCTACCGATAACCACTTCAACATATTCAAAACAGAagggttgaaaataaaattggaaaccTGTCTTCCGATAGTCGTTTCCCAACATTGTCTTCTACCCGACACCATATGCAAAGAATGCACAGAGAACGTGGAAACCTTCTATACGTTCATCAAAAATTGTCTCgagaatttaattatattagaGTCACAGTATGATATACACGAATCCTGTTTGAAGAGCaaacaaaaattcgaaaagGGTACTATCGTTGATAGAACTACAAAGACTGAAAGAGGTATTCAAACCGATGAGATTAGCTTCATAGGTTCATACAAAGagtcaatattaaattttccaaggACGTTAGAAGAGGCAGAAAAGACTTTGAACCAAAACCATGTTGATTACTCAAAGTATTTTCCGGAAACGTTCAATAAAGATCGCCGGGTGAATTTGGTTAGTTACGATGTGTCAGACGAATCGAATTCGGAAAACGAAGATTCGAATACACTCAGAGTTTCAAATAAGATAGCGTTCGCAAGCAACGGTGAGAATAGGACCTCCCTACAAGGTGTGGACGTCGATAATTTCCTCatcaacaaacaatattttgacaATCAAGAAAATCGGCTGATAAACGAAATTACGCAGAGGttaaaccaaaaaagaaaatgtgatgAAATATTGCCTTATCGAacgaaaatatgcaaatacgaCTTTAATAGCCGACGAAAGAATAGACAGCCTAAGAAAAtcagtaataaaattatagagGACGCACCTATTTTTAATCAGTGGAATCAAGATATCACAAACAGGATAGAAGCTATTGGTGCAACGAGTCATAAGGTGTTAGGTGATACGAGACAGGAAGAACGGCTTGAGAATGCGAATACCATCCAAAGCCTACCGCAGGTGTGCCTGCTGTGCGAGTCCCAATTCCCTACGCCCGCAGAATTGGCTGGTCACGTGTTCGAAACGCACGGCATCGACATGGCACAGATCCTCGCCTCGGAACCTGTCatggaaaagaagaagaaaataccGAACCTGGTGAAGATCGCCGATTTGAAGAACAAGAGTGAGATCTCGGAACCATCGCTTCCCATCAACATGGACATCGCCGAAGAACCCCCAACGTTGCAGCCAAGTTACGCATGTCCAATATGCCCAGCCTTACTGACGAACAAAACTGATCTCTATACACATCTCCGTGTCAAACACGCCAAACAAGCGTCCTTAACCTGCGGACTATGTACTCAACTCTGCAACTCATGCATTTCCCTATCGTCTCACCTAGAAACCTGCACAAAACAACATCCTTTAACCTCTTCAGCCAAATACATCTGCAAAGTCTGTCGATACAGCGATGACAACTCGAAAACCCTTGAAAATCACATCGTAGTCCACGATTTCATTCTCCAATACTGTCGGAAGCAATCCAAGATCTTCGATCCAAGCGATTACATCGAACTGAACCCTAACTCTGAGAGTTCGCCGAAGATTTACACATGTAACGAGTGTACCGAAGGAGTCTTCGACGATTTCAAAGAATTCAGCGCTCACCGTAGGTCTCAACATCAGATCTTCCATTGCGATCTCTGTAATAAGTTCTACGGTAGGAATTCCCACCTGTGGAAGCATGTGAATCGATTGCACAAAGGTCATCCGAGTATCACCTGCCAATTATGCCACAAAACGAGTGCTTCGAAGTATCATTTGGCGCAGCATTTCAGCAAGATTCACAGCGCGAAACTGTTTAATTCGAAACCGGATCCTACGAATGACTACGAAGACTTTATGAAGCAGAAGTTCCAGGGCTTCGATTTCCAGTCGGTGAAGCAGAGCTTTATGCGACAGGAAATGTTGAAACATGAACAGAAGGATTCGTTTAGTGAGATCTCGGAAcaggaagaagaaaatgagaagGGAGATGATGATGAAAAGAATTCGGAAaaggAAAAAGGACAGAACCCACCAAAAGAGATCGACTCATCCTCTAACCTCTACACCAACATAATAACTAACTACACCCCGCCACAAAACAACGGCGAATTCAAGTGTCCGAAATGTCTCAAAGGATTTCACAAGAAGAACCTCCTtaaaaagcacaaaaagaaCTGCAGGCCTCGCCAACAAAAAGATCTCCTCACCCGCTGTAAAACCTGCTCGCGAATCTTCAAAGACCGACAAAGCTTGACCAAACATCTCATTAACTACCATTCGGAGTACGTTTGCGAGATATGCAGTCACAAATTCCAAAGTAAATGTGAAATCGTATCGCATATCCGGTTCACGCATCCGAATTGCCACCTGTTCTGTTCTTGCGGGAATATCTTAAGAAATAAGGAAGATCTAAGGTTGCACAGGCAGGATCATTGGAACTCCTTCATCTGCCAGTTTTGTGCTGACAGTTTGCCTACGAAGATCAAGCTCAAGATGCATATTTTGAGCTTGCATCGGAAGATCTTGAGCTTGAGTTGTGGAATCTGTTTGAAATTGTTTGAGACTCAACACATATTGAGGGATCACGTTCGATTAGTGCATAAGGAACACCTCTTACCACTTACTTCCTGCACGGTCTGTGGTAAAAACTACGGCTCCAAATGGAAAACGTTCGACCATCTCAATAAATCCCACGGTAGAATCTTCAAACCTTGCAAGGTCTGCTTAGAAGTATTTGATTCCGAAGAACAGCTGCAGAAACACTACGATACAATGCACATAACATTCTCCCAATCGAAAAGCTCGATCCAGAGTACCCCTTCGAACGAATTCGGTAGCATCAAGAAGGAACTCTGCGAAAGCGACTTCGAACACAACTACGAAAACGAAGACAAGAACAGTAACAGCGATGTGGAGGATGCTGAAAATTATTCCGGTTACCAAAACATGACCCAAAGCGACTACGATGAGAGAACCACAGGCTCCAAGATAGACTACTCCAACACAATGGACGAAGGCAAGATTTCGTTACTAGAGAAAAGGTTGCTGGGGAAAAAGTTACCATCCGAAGACCAAAAGAAATCCTCCAAAAAGATTAAGAATGATAAGAAGATGGAATATTCAGTGATCTTCCCAACAAATAATACCAAGCAAAGGGAGTTTGATGATATTGAAAGCAATCAGAGTCCCCTGCAGAATAGTTCGAAGAGAACGGTGTATGTCAACAGTAATGATCCTTCCCTTTGCGAGATCTGTTTGAAGACGTGGCCTGCTAAAAAGCACTTATGGCAGCACTACATTCGTTGCCATAAAACGGTTGCTGCTACTGTTTGTGGGATCTGTTTGAAAGCCAATGAAAGCTACGAGTCGTTGCAGAAACATCTGAGGGAGAATCATCCGACTTTGCTTCATGGGCAAGGATTTGGATCGAATTTCATTTGTAGGATATGTGGAAGGTATCACAACGCAAGTTCAAAGCTCAAATTACACATGGCAATACATGAAAACTTCGACTGGAAAATATTGGAATCATTCGAGAACACCAAAGCAGACCATCCCGAAATCAAAATTGAAGACACGCTGGTCAACGGTTACGATATAAAGgaggaggaagaagaggaagacgAAGCAGAGGAAGGTAAACAGATACAACCCGAGATCAACTTCGAAAGCCTCATCGAAGAAGTGGAGTGCAGCTCCGAGTCTGAGAACGAGAACGTCAACGATTCTGAAGATGAAGATCAACACGGTCAAAACGAGGACACATCAACCAGCGACCCTAGCGATTCCGACGATGTCTCTGAGGAGAACTCCTTGGAATCTCAGATGCTCCAGAACATGCTCATCGAGAAGAATATGCTGCAAAAGCAAGTTGACGCTATCAAAAAGAACAACGGCGGAACACCTTATAAGACTGAAACCCAGAACAAAATCATTCCGTACGATTCCGCCGAGAACGGACTCAAGCAGATGACCTCTTCAGAAACCGAAGATTCCAATTCTTCCAGTACTGATCATGAGCATGAGAATGACGAGTGCAAGTCTGAGATTAAAAGCGAGAATGGTTCCTCGGAAGATGAAGACGAGTCGCAAATCTCGATAGTGACTGAGGATGATGAGGAAGAGGAACAGAATCGGGACGATTCAAACGATTCCTCTAGAAACGTTTTCGAGAGAAAACCCGAAGAATTAGACTCGGCAATCAAATCCATTAGTTATGAAGAGCTGGATGTTAAAGATGAGCAGATTGGGGATCAATATTGTGAGTTGCAAGCGCAAAATCTGAATCCGCACGAGATACAAAGTGCCGTTGATAGTAttctgtaa
Protein Sequence: METKLCRICGKSTDNHFNIFKTEGLKIKLETCLPIVVSQHCLLPDTICKECTENVETFYTFIKNCLENLIILESQYDIHESCLKSKQKFEKGTIVDRTTKTERGIQTDEISFIGSYKESILNFPRTLEEAEKTLNQNHVDYSKYFPETFNKDRRVNLVSYDVSDESNSENEDSNTLRVSNKIAFASNGENRTSLQGVDVDNFLINKQYFDNQENRLINEITQRLNQKRKCDEILPYRTKICKYDFNSRRKNRQPKKISNKIIEDAPIFNQWNQDITNRIEAIGATSHKVLGDTRQEERLENANTIQSLPQVCLLCESQFPTPAELAGHVFETHGIDMAQILASEPVMEKKKKIPNLVKIADLKNKSEISEPSLPINMDIAEEPPTLQPSYACPICPALLTNKTDLYTHLRVKHAKQASLTCGLCTQLCNSCISLSSHLETCTKQHPLTSSAKYICKVCRYSDDNSKTLENHIVVHDFILQYCRKQSKIFDPSDYIELNPNSESSPKIYTCNECTEGVFDDFKEFSAHRRSQHQIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCHKTSASKYHLAQHFSKIHSAKLFNSKPDPTNDYEDFMKQKFQGFDFQSVKQSFMRQEMLKHEQKDSFSEISEQEEENEKGDDDEKNSEKEKGQNPPKEIDSSSNLYTNIITNYTPPQNNGEFKCPKCLKGFHKKNLLKKHKKNCRPRQQKDLLTRCKTCSRIFKDRQSLTKHLINYHSEYVCEICSHKFQSKCEIVSHIRFTHPNCHLFCSCGNILRNKEDLRLHRQDHWNSFICQFCADSLPTKIKLKMHILSLHRKILSLSCGICLKLFETQHILRDHVRLVHKEHLLPLTSCTVCGKNYGSKWKTFDHLNKSHGRIFKPCKVCLEVFDSEEQLQKHYDTMHITFSQSKSSIQSTPSNEFGSIKKELCESDFEHNYENEDKNSNSDVEDAENYSGYQNMTQSDYDERTTGSKIDYSNTMDEGKISLLEKRLLGKKLPSEDQKKSSKKIKNDKKMEYSVIFPTNNTKQREFDDIESNQSPLQNSSKRTVYVNSNDPSLCEICLKTWPAKKHLWQHYIRCHKTVAATVCGICLKANESYESLQKHLRENHPTLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWKILESFENTKADHPEIKIEDTLVNGYDIKEEEEEEDEAEEGKQIQPEINFESLIEEVECSSESENENVNDSEDEDQHGQNEDTSTSDPSDSDDVSEENSLESQMLQNMLIEKNMLQKQVDAIKKNNGGTPYKTETQNKIIPYDSAENGLKQMTSSETEDSNSSSTDHEHENDECKSEIKSENGSSEDEDESQISIVTEDDEEEEQNRDDSNDSSRNVFERKPEELDSAIKSISYEELDVKDEQIGDQYCELQAQNLNPHEIQSAVDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01253147;
90% Identity: iTF_01121196;
80% Identity: -