Basic Information

Insect: Marronus borbonicus
Gene Symbol: -
Assembly: GCA_902655005.1
Location: LR737386.1:4610855-4620484[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0017 0.14 12.8 1.0 2 23 191 213 190 213 0.96

2 20 0.029 2.4 8.9 0.5 1 20 343 362 343 364 0.95

3 20 0.58 48 4.8 1.3 1 19 448 466 448 471 0.95

4 20 5.3e-06 0.00043 20.7 2.1 2 23 544 565 543 565 0.96

5 20 2.3e-06 0.00019 21.8 1.0 2 23 580 601 579 601 0.97

6 20 0.99 81 4.1 0.1 2 23 609 631 608 631 0.92

7 20 0.00072 0.059 13.9 0.2 2 23 636 657 636 657 0.96

8 20 0.0023 0.19 12.3 0.1 1 23 679 702 679 702 0.98

9 20 0.011 0.89 10.2 3.3 1 23 726 748 726 749 0.95

10 20 0.003 0.25 12.0 0.6 1 23 759 781 759 781 0.98

11 20 1.3e-06 0.00011 22.5 7.0 1 23 809 831 809 831 0.99

12 20 0.26 21 5.9 2.6 3 23 853 873 851 873 0.97

13 20 0.0046 0.38 11.4 0.5 1 23 914 936 914 936 0.97

14 20 0.024 2 9.1 0.2 2 23 950 972 949 972 0.93

15 20 0.00044 0.036 14.6 1.3 1 23 987 1009 987 1009 0.93

16 20 0.32 27 5.6 0.3 1 23 1031 1054 1031 1054 0.93

17 20 0.0023 0.19 12.4 0.3 2 23 1065 1086 1064 1086 0.96

18 20 4.6e-05 0.0038 17.7 1.4 1 23 1093 1116 1093 1116 0.95

19 20 2.6e-05 0.0021 18.5 1.9 1 23 1124 1146 1124 1146 0.99

20 20 0.00025 0.021 15.4 0.4 1 23 1164 1187 1164 1187 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0017	0.14	12.8	1.0	2	23	191	213	190	213	0.96
2	20	0.029	2.4	8.9	0.5	1	20	343	362	343	364	0.95
3	20	0.58	48	4.8	1.3	1	19	448	466	448	471	0.95
4	20	5.3e-06	0.00043	20.7	2.1	2	23	544	565	543	565	0.96
5	20	2.3e-06	0.00019	21.8	1.0	2	23	580	601	579	601	0.97
6	20	0.99	81	4.1	0.1	2	23	609	631	608	631	0.92
7	20	0.00072	0.059	13.9	0.2	2	23	636	657	636	657	0.96
8	20	0.0023	0.19	12.3	0.1	1	23	679	702	679	702	0.98
9	20	0.011	0.89	10.2	3.3	1	23	726	748	726	749	0.95
10	20	0.003	0.25	12.0	0.6	1	23	759	781	759	781	0.98
11	20	1.3e-06	0.00011	22.5	7.0	1	23	809	831	809	831	0.99
12	20	0.26	21	5.9	2.6	3	23	853	873	851	873	0.97
13	20	0.0046	0.38	11.4	0.5	1	23	914	936	914	936	0.97
14	20	0.024	2	9.1	0.2	2	23	950	972	949	972	0.93
15	20	0.00044	0.036	14.6	1.3	1	23	987	1009	987	1009	0.93
16	20	0.32	27	5.6	0.3	1	23	1031	1054	1031	1054	0.93
17	20	0.0023	0.19	12.4	0.3	2	23	1065	1086	1064	1086	0.96
18	20	4.6e-05	0.0038	17.7	1.4	1	23	1093	1116	1093	1116	0.95
19	20	2.6e-05	0.0021	18.5	1.9	1	23	1124	1146	1124	1146	0.99
20	20	0.00025	0.021	15.4	0.4	1	23	1164	1187	1164	1187	0.98

Sequence Information

Coding Sequence: ATGGGCGAGGAAAGTTTTGGAAATTACAGCTCCTGCTGTCGACTCTGCTTATCCGATAAATTCAACTATTTGAAGCCGATATTTGAGGACGTGACGGAAGGTACGAGATTGGTGCGGAGAGTTTTGAATTTCCTCGGTATAGAGATATTACCAAATGACAAAATCTCCACAATGATCTGCAACCAATGCCGGGCAAAGGTGAACAATTGGGAGACTTACAAATCCGATTGTACAAAAAACCAAAGCAAACTGCAAGAATGGTGCAGCAGTTGGTCTGCTGCAAATGGAGATAGCAATATAAGCATTGCGACAATTCAAGTCAAAGATGAGCCAGTGGACTGTGATGAGAATCCTGATATTCCTCAGCTGGAAGATGCCTCGGAAGATCAGGTTACGGCCATCAAACCTGAACCTACGGATGATGTGATTGAAGAATATTACGAGCAACCTCCGCAGCTAACCCCACACAACCATGATTCACGTTTACAAGATTATGACGACCAACCGAGTCTAGTGATAGcAAATGGGCACGAAGAAAGCTTCGAGGGTAAAAGGAACGTAAATAGTAAGCAATGCACAATTTGTTATAAGCTTTTTAGCACATCTGGTAATCGCATGAAGCATGAACGCATTATTCATGGTAATGGGGTACGAAAATCAACAGTGGTTGCTAATGGTGcTTCGGCAAGTCAGGATGACAACTCTCAACAATCAATAGAATCCTTTGTGAGCAGTACAATGAATACCGATGTTTCCAATTTAGATTCCGAGAATGACAATCAAAATTCCAACCTGCAAAAGATCCAGTTCGCCGCCGGACTGCGTCTTAAACAGAAATCTCAGAGATCTTCACCTCCTTCGACAATAGAAGGTCCCTTAACTCCAATCGAATTAGCTTACATCGATCGAAGTAAAGCCTTATTGTCGATGCTCCACAAGTTCCGTTGTGCTTGTCATAATGTAGCTTTTCCTACAGTTAAGCGCTTGTTTGCGCATCTACGCATGAGTTATACCTGGTTTCCTATATTTACTTGTTATAATTGTGTTATAACTTTCTCCACGCGTTCATTAAATATGAGACACACAGGGAGATGCCCAAAACCTTACTTAGAGAATAGTATGAGGTTATCCGAGATGAGAAAACGCACCGAAACCAAGATACGATTATACCAATACAGCAAATGCGTTAAATgcgaaaatttatattctttctatGAAGATTACTGTGAACATATTGACAAGGACCATTCCCAAGAATCACCATTTGTCTGCTTGTGCTCGAGGAAATTTGACAGTGTCGATGAATTTAGGCAACACGCATACAATACGTGTTACTTGGCGTACTACTGTGATGTTTGCTATTCAGTGTTTGAATCTCTTGACGATTTTCGTATTCACTGCGAGGATGAACATGACAAGATTGAGGGGTACAGTTTTGTTACTCCAAATCCCACGTTTAGTCTTGTTGATCGTGAGGAAATAGCCGCTTCTCGGAAGAGGACCCACGACGAAATGCAAAATGATAGTGCAGGTAGCATCGAACATAAGGAAGAATTGACTGAAATTAAGCAGGAAGACGGTAACGACAGGAAGAAGTTTATTCCAACTAAACCTTATAATGAACCAACTAGTTGTGATCTATGCGATCGGAGGTTCTCAAATTATTACAGCTTGAGGAAACATATGAAGTTACACAGGAGGAGTAGCATTGCCAATGGTTGGAAAAGCAAACCATCCACTTGCGATAAATGTGGAAAAGTATTCTCGACATACTACAATATGGTTAGACACTATAAAGTGCATGATGATACAGAGAAACACCTTCAATGTGCTTTATGTTCTGATAAATTTAGATTGGTATCTGAACTAAAGGACCACTTGATTCTTGTTCATGGCCAAGCTAATGTCTGTCAAGAATGTGGCCGACAATTTGAGTCTGTGAAGGAATTGGAGCAACATAGAAGCGTCCATTTGAATATCAAAGTCTATAGGGATTCGAAAACTCAATCGTACAGGACAGGAACTAAGCCACGTTACACTTGCGACTTGTGCGAGAATGTTTTTGATACAGACACAGAGTTAAACGATCACATCGAAACAATGCACAATGGAATGTCCCGAGAAGACAAAAAGGTGGTTTTGGAAGAGAGTCCAAATCCAGAGGAATTTGGAAGATTCTCATGTGCAGACTGTGACCGTCATTATGTTAGTTACAAAGGATTATGGTTGCATAATCGGAGACATCACCCAGAACGTAAACCTACCCCGCAGACGTTTGAGTGCCAGTATTGCGACAGAGTACTTCAAACCAATGCTGCATATCAAATGCATAAACAAATGCATGAGAGGATGCAAGAGAGAATGCAAAGGCAAAGTAGCCTAGCAGTCCATATCAAGAATGCAGAAGATGAGGAGGAGTCATATTTCACATGCAAGCATTGCTTTAAGGTATTCTCAAACAAATACAACTTAAAAACTCATTTGAAGACCCATGGTATTTATGTATCACCTGGAAGAAGCTACTCGAAATCTGGGAAATTCATGAAGACATTCTGGTGTGACGTCTGCCACCAAGCTTGTCAGGGTTACTCCGAATTGCAAAAGCACAAACAGGAGcatatcaaagaaaaattgaaggaCTCCCACAGCAGGCAACAGGTCTCCCACCACCAACCCGCGCAGATGCATCATCTACAAACAATCGACGTGGAAGTAGATGAGGATATCAAACCGCAGATCTTCAACTGCGATATTTGTACAAAAGGGTTCTTATCGAGAGGGCAATTAATGTCGCATAAGGCGACACATGATCAAGAGAATCGTggtaatcaaaagaaaaatttcatctATTGCAAGTATTGTAAGATACCCTTCTTAAACGTTGAAAGTTTAAACAAGCATATGTCAGGTGAACATAACGAGTTAAAAGCGCAGAAATCTAAAAGTATTACCAAAAAGCACGCTTGTAATATGTGCAAGAAGGTGTTTGATACGGCTGGAGCTCTGTGTTCGCATCAAGGTTGGCATAAACGAGGTAAATCGGACAAAACATTGAAATCGGAAAGGACGGTCCGCCCAGTTAGTATTAAACATGAATGTACCTCATGCAACTTAACCTTCTTAACAGACACAGCGTTACAAATCCATATCCTTGAAGCTCATCGAAACGTTAATGCACACGTGCTGCCATCTAGGTGTACCATCTGCAACATCGAATTTAAAACGCAAGCATCCTACGATGAACACGCTAGATTGCATAGAACATCCTCTACTACCTTCCAGTGTAAATACTGCCCCAAGAGGTTCAATAAAAGCGAAACCTTCAATATCCACGTTAATGAAGTTCATCCTCAGTTCgctaatatcaaatttaaatgccACCAATGTGAACGCGTTTTTGAGAAACAGAACGCTTTGACGATCCATCTTAAGGTGCACGACAGGCAGAGATTGACCGGGGCCCCTATTAAACCACCAAAATCTCATGTTTATACCTGTTCGATATGTCATCTAGGTTTCGAGATTCCTAAAGACTTGCGTAATCATATAATTACGTCACATCCCTTTTAA
Protein Sequence: MGEESFGNYSSCCRLCLSDKFNYLKPIFEDVTEGTRLVRRVLNFLGIEILPNDKISTMICNQCRAKVNNWETYKSDCTKNQSKLQEWCSSWSAANGDSNISIATIQVKDEPVDCDENPDIPQLEDASEDQVTAIKPEPTDDVIEEYYEQPPQLTPHNHDSRLQDYDDQPSLVIANGHEESFEGKRNVNSKQCTICYKLFSTSGNRMKHERIIHGNGVRKSTVVANGASASQDDNSQQSIESFVSSTMNTDVSNLDSENDNQNSNLQKIQFAAGLRLKQKSQRSSPPSTIEGPLTPIELAYIDRSKALLSMLHKFRCACHNVAFPTVKRLFAHLRMSYTWFPIFTCYNCVITFSTRSLNMRHTGRCPKPYLENSMRLSEMRKRTETKIRLYQYSKCVKCENLYSFYEDYCEHIDKDHSQESPFVCLCSRKFDSVDEFRQHAYNTCYLAYYCDVCYSVFESLDDFRIHCEDEHDKIEGYSFVTPNPTFSLVDREEIAASRKRTHDEMQNDSAGSIEHKEELTEIKQEDGNDRKKFIPTKPYNEPTSCDLCDRRFSNYYSLRKHMKLHRRSSIANGWKSKPSTCDKCGKVFSTYYNMVRHYKVHDDTEKHLQCALCSDKFRLVSELKDHLILVHGQANVCQECGRQFESVKELEQHRSVHLNIKVYRDSKTQSYRTGTKPRYTCDLCENVFDTDTELNDHIETMHNGMSREDKKVVLEESPNPEEFGRFSCADCDRHYVSYKGLWLHNRRHHPERKPTPQTFECQYCDRVLQTNAAYQMHKQMHERMQERMQRQSSLAVHIKNAEDEEESYFTCKHCFKVFSNKYNLKTHLKTHGIYVSPGRSYSKSGKFMKTFWCDVCHQACQGYSELQKHKQEHIKEKLKDSHSRQQVSHHQPAQMHHLQTIDVEVDEDIKPQIFNCDICTKGFLSRGQLMSHKATHDQENRGNQKKNFIYCKYCKIPFLNVESLNKHMSGEHNELKAQKSKSITKKHACNMCKKVFDTAGALCSHQGWHKRGKSDKTLKSERTVRPVSIKHECTSCNLTFLTDTALQIHILEAHRNVNAHVLPSRCTICNIEFKTQASYDEHARLHRTSSTTFQCKYCPKRFNKSETFNIHVNEVHPQFANIKFKCHQCERVFEKQNALTIHLKVHDRQRLTGAPIKPPKSHVYTCSICHLGFEIPKDLRNHIITSHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01252999;
90% Identity: iTF_00627526; iTF_01121030;
80% Identity: -